| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | 449616 = | 53 (0.900) | 6 (0.110) | 3/96 | NT | 10.8% | coding (722/2049 nt) | kdpB | potassium translocating ATPase, subunit B |
| ? | minE | 449637 = | 49 (0.880) | coding (701/2049 nt) | kdpB | potassium translocating ATPase, subunit B | |||||
GGGATCAGACAGACCAGCAGCGCCACCAGTACCGTTACGCTGACTGCATTACCGCCCCACGCGGAAAACGGCCACAGCGTGGCGGTTGCCAGTAAAAAGACGATAGTCAGGGCAATCAGCAGAATGGTCAGGGCAATTT > minE/449547‑449685 | gggATCAGACAGACCAGCAGCGCCACCAGTACCGTTACGCTGACTGCATTACCGCCCCACGCGGAAAACg < 1:169803/70‑1 (MQ=255) ggATCAGACAGACCAGCAGCGCCACCAGTACCGTTACGCTGACTGCATTACCGCCCCACGCGGAAAACGGc > 1:718369/1‑71 (MQ=255) aTCAGACAGACCAGCAGCGCCACCAGTACCGTTACGCTGACTGCATTACCGCCCCACGCGGAAAACGGCca < 1:2172279/71‑1 (MQ=255) tCAGACAGACCAGCAGCGCCACCAGTACCGTTACGCTGACTGCATTACCGCCCCACGCGGAAAACGGCca > 1:2989434/1‑70 (MQ=255) tCAGACAGACCAGCAGCGCCACCAGTACCGTTACGCTGACTGCATTACCGCCCCACGCGGAAAACGGCca > 1:1049140/1‑70 (MQ=255) tCAGACAGACCAGCAGCGCCACCAGTACCGTTACGCTGACTGCATTACCGCCCCACGCGGAAAACGGCca > 1:1797118/1‑70 (MQ=255) cagacagaCCAGCAGCGCCACCAGTACCGTTACGCTGACTGCATTACCGCCCCACGCGGAAAACGGCca > 1:2410410/1‑69 (MQ=255) agacagacCAGCAGCGCCACCAGTACCGTTACGCTGACTGCATTACCGCCCCACGCGGAAAACGGCCACAg < 1:267412/71‑1 (MQ=255) acagacCAGCAGCGCCACCAGTACCGTTACGCTGACTGCATTACCGCCCCACGCGGAAAACGGCCACAGCg < 1:13416/71‑1 (MQ=255) gacCAGCAGCGCCACCAGTACCGTTACGCTGACTGCATTACCGCCCCACGCGGAAAACGGCCACAGCGTgg < 1:2639146/71‑1 (MQ=255) gacCAGCAGCGCCACCAGTACCGTTACGCTGACTGCATTACCGCCCCACGCGGAAAACGGCCACAGCGTgg < 1:703083/71‑1 (MQ=255) ccAGCAGCGCCACCAGTACCGTTACGCTGACTGCATTACCGCCCCACGCGGAAAACGGCCACAGCGTGGCg < 1:1401400/71‑1 (MQ=255) agcagcGCCACCAGTACCGTTACGCTGACTGCATTACCGCCCCACGCGGAAAACGGCCACAGCGTGGCGGt > 1:292837/1‑71 (MQ=255) agcGCCACCAGTACCGTTACGCTGACTGCATTACCGCCCCACGCGGAAAACGGCCACAGCGTGGCGGTTGc > 1:1034493/1‑71 (MQ=255) cgcCACCAGTACCGTTACGCTGACTGCATTACCGCCCCACGCGGAAAACGGCCACAGc > 1:3058798/1‑58 (MQ=255) accaGTACCGTTACGCTGACTGCATTACCGCCCCACGCGGAAAACGGCCACAGCGTGGCGGTTGCCAGTaa < 1:966656/71‑1 (MQ=255) accaGTACCGTTACGCTGACTGCATTACCGCCCCACGCGGAAAACGGCCACAGCGTGGCGGTTGCCAGTaa < 1:183210/71‑1 (MQ=255) accaGTACCGTTACGCTGACTGCATTACCGCCCCACGCGGAAAACGGCCACAGCGTGGCGGTTGCCAGTa > 1:1034495/1‑70 (MQ=255) accaGTACCGTTACGCTGACTGCATTACCGCCCCACGCGGAAAACGGCCACAGCGTGGCGGTTGCCAGTa > 1:252407/1‑70 (MQ=255) accaGTACCGTTACGCTGACTGCATTACCGCCCCACGCGGAAAACGGCCACAGCGTGGCGGTTGCCAGTa > 1:506146/1‑70 (MQ=255) accaGTACCGTTACGCTGACTGCATTACCGCCCCACGCGGAAAACGGCCACAGCGTGGCGGTTGCCAGTa > 1:2965714/1‑70 (MQ=255) accaGTACCGTTACGCTGACTGCATTACCGCCCCACGCGGAAAACGGCCACAGCGTGGCGGTTGCCAGTa > 1:1038929/1‑70 (MQ=255) caGTACCGTTACGCTGACTGCATTACCGCCCCACGCGGAAAACGGCCACAGCGTGGCGGTTGCCAGTaaaa < 1:2878787/71‑1 (MQ=255) caGTACCGTTACGCTGACTGCATTACCGCCCCACGCGGAAAACGGCCACAGCGTGGCGGTTGCCAGTaaa > 1:495214/1‑70 (MQ=255) cctgaccattctgctgattgccctgactatcgtctttttactGGCCACAGCGTGGCGGTTGc > 1:1113128‑M1/43‑62 (MQ=255) tgaccattctgctgattgccctgactatcgtctttttactGGCCACAGCGTGGCGGTTGCCa < 1:2967740‑M1/22‑1 (MQ=255) tgaccattctgctgattgccctgactatcgtctttttactGGCCACAGCGTGGCGGTTGCCa < 1:1821780‑M1/22‑1 (MQ=255) tACCGTTACGCTGACTGCATTACCGCCCCACGCGGAAAACGGCCACAGCGTgg > 1:1043775/1‑53 (MQ=255) tACCGTTACGCTGACTGCATTACCGCCCCACGCGGAAAACGGCCACAGCGTgg > 1:1608183/1‑53 (MQ=255) tACCGTTACGCTGACTGCATTACCGCCCCACGCGGAAAACGGCCACAGCGTgg > 1:1626380/1‑53 (MQ=255) tACCGTTACGCTGACTGCATTACCGCCCCACGCGGAAAACGGCCACAGCGTg > 1:1488892/1‑52 (MQ=255) tACAGTTACGCTGACTGCATTACCGCCCCACGCGGAAAACGGCCACAGCGTgg > 1:3331454/1‑53 (MQ=255) aCCGTTACGCTGACTGCATTACCGCCCCACGCGGAAAACGGCCACAGCGTGGCGGTTGCCAGTAAAAAg < 1:204782/69‑1 (MQ=255) ccGTTACGCTGACTGCATTACCGCCCCACGCGGAAAACGGCCACAGCGTGGCGGTTGCCAGTAAAAAGAc > 1:1999494/1‑70 (MQ=255) ccGTTACGCTGACTGCATTACCGCCCCACGCGGAAAACGGCCACAGCGTGGCGGTTGCCAGTAAAAAGAc > 1:2393225/1‑70 (MQ=255) cGTTACGCTGACTGCATTACCGCCCCACGCGGAAAACGGCCACAGCGTGGCGGTTGCCAGTAAAAAGAc > 1:1375358/1‑69 (MQ=255) cGTTACGCTGACTGCATTACCGCCCCACGCGGAAAACGGCCACAGCGTGGCGGTTGCCAGTAAAAAGAc > 1:724508/1‑69 (MQ=255) cGTTACGCTGACTGCATTACCGCCCCACGCGGAAAACGGCCACAGCGTGGCGGTTGCCAGTAAAAAGAc > 1:357336/1‑69 (MQ=255) aCGCTGACTGCATTACCGCCCCACGCGGAAAACGGCCACAGCGTGGCGGTTGCCAGTAAAAAGACGATa > 1:2873968/1‑69 (MQ=255) aCGCTGACTGCATTACCGCCCCACGCGGAAAACGGCCACAGCGTGGCGGTTGCCAGTAAAAAGACGATa > 1:1431365/1‑69 (MQ=255) cGCTGACTGCATTACCGCCCCACGCGGAAAACGGCCACAGCGTGGCGGTTGCCAGTAAAAAGACGATAGt < 1:145603/70‑1 (MQ=255) cGCTGACTGCATTACCGCCCCACGCGGAAAACGGCCACAGCGTGGCGGTTGCCAGTAAAAAGACGATAGt < 1:3676554/70‑1 (MQ=255) cGCTGACTGCATTACCGCCCCACGCGGAAAACGGCCACAGCGTGGCGGTTGCCAGTAAAAAGACGATAGt < 1:433715/70‑1 (MQ=255) cGCTGACTGCATTACCGCCCCACGCGGAAAACGGCCACAGCGTGGCGGTTGCCAGTAAAAAGACGATAGt < 1:2359549/70‑1 (MQ=255) gCTGACTGCATTACCGCCCCACGCGGAAAACGGCCACAGCGTGGCGGTTGCCAGTAAAAAGACGATAGTCa < 1:3485951/71‑1 (MQ=255) gACTGCATTACCGCCCCACGCGGAAAACGGCCACAGCGTGGCGGTTGCCAGTAAAAAGACGATAGTCAggg > 1:3171025/1‑71 (MQ=255) aCTGCATTACCGCCCCACGCGGAAAACGGCCACAGCGTGGCGGTTGCCAGTAAAAAGACGATAGTCAGGGc < 1:3260973/71‑1 (MQ=255) tGCATTACCGCCCCACGCGGAAAACGGCCACAGCGTGGCGGTTGCCAGTAAAAAGACGATAGTCAGGGCaa > 1:430004/1‑71 (MQ=255) gccctgactatcgtctttttactGGCCACAGCGTGGCGGtt > 1:2394324‑M1/24‑41 (MQ=255) gccctgactatcgtctttttactGGCCACAGCGTGGCGGtt > 1:836112‑M1/24‑41 (MQ=255) cATTACCGCCCCACGCGGAAAACGGCCACAGCGTGGCGGTTGCCAGTAAAAAGACGATAGTCAGGGCAATc < 1:2251377/71‑1 (MQ=255) cATTACCGCCCCACGCGGAAAACGGCCACAGCGTGGCGGTTGCCAGTAAAAAGACGATAGTCAGGGCAATc < 1:1820270/71‑1 (MQ=255) cATTACCGCCCCACGCGGAAAACGGCCACAGCGTGGCGGTTGCCAGTAAAAAGACGATAGTCAGGGCAATc < 1:94996/71‑1 (MQ=255) ccctgactatcgtctttttactGGCCACAGCGTGGCGGtt > 1:2383124‑M1/23‑40 (MQ=255) ccGCCCCACGCGGAAAACGGCCACAGCGTGGCGGTTGCCAGTAAAAAGACGATAGTCAGGGCAATcagcag < 1:289633/71‑1 (MQ=255) cGCCCCACGCGGAAAACGGCCACAGCGTGGCGGTTGCCAGTAAAAAGACGATAGTCAGGGCAATcagcag < 1:25246/70‑1 (MQ=255) ccccACGCGGAAAACGGCCACAGCGTGGCGGTTGCCAGTAAAAAGACGATAGTCAGGGCAATCAGCAGAAt < 1:26319/71‑1 (MQ=255) ccACGCGGAAAACGGCCACAGCGTGGCGGTTGCCAGTAAAAAGACGATAGTCAGGGCAATCAGCAGAATgg > 1:3404575/1‑71 (MQ=255) ccACGCGGAAAACGGCCACAGCGTGGCGGTTGCCAGTAAAAAGACGATAGTCAGGGCAATCAGCAGAATgg > 1:313966/1‑71 (MQ=255) cgcgGAAAACGGCCACAGCGTGGCGGTTGCCAGTAAAAAGACGATAGTCAGGGCAATCAGCAGAATGGTCa < 1:3119759/71‑1 (MQ=255) cgcgGAAAACGGCCACAGCGTGGCGGTTGCCAGTAAAAAGACGATAGTCAGGGCAATCAGCAGAATGGTCa < 1:206133/71‑1 (MQ=255) gcgGAAAACGGCCACAGCGTGGCGGTTGCCAGTAAAAAGACGATAGTCAGGGCAATCAGCAGAATGGTCAg > 1:2159443/1‑71 (MQ=255) gcgGAAAACGGCCACAGCGTGGCGGTTGCCAGTAAAAAGACGATAGTCAGGGCAATCAGCAGAATGGTCAg > 1:995177/1‑71 (MQ=255) cgGAAAACGGCCACAGCGTGGCGGTTGCCAGTAAAAAGACGATAGTCa < 1:648164/48‑1 (MQ=255) cgGAAAACGGCCACAGCGTGGCGGTTGCCAGTAAAAAGACGATAGTCa > 1:2382012/1‑48 (MQ=255) cgGAAAACGGCCACAGCGTGGCGGTTGCCAGT‑AAAAGACGATAGTCa < 1:1965431/47‑1 (MQ=39) aaaCGGCCACAGCGTGGCGGTTGCCAGTAAAAAGACg < 1:3325051/37‑1 (MQ=255) aaaCGGCCACAGCGTGGCGGTTGCCAGTAAAAAGACg < 1:2948696/37‑1 (MQ=255) aaaCGGCCACAGCGTGGCGGTTGCCAGTAAAAAGACg < 1:1056240/37‑1 (MQ=255) aaaCGGCCACAGCGTGGCGGTTGCCAGTAAAAAGACGATAGTCAGGGCAATCAGCAGAATGGTCAGGGCaa > 1:2965597/1‑71 (MQ=255) aaaCGGCCACAGCGTGGCGGTTGCCAGTAAAAAGACGATAGTCAGGGCAATCAGCAGAATGGTCAGGGCaa > 1:2602826/1‑71 (MQ=255) aCGGCCACAGCGTGGCGGTTGCCAGTAAAAAGACGATAGTCAGGGCAATCAGCAGAATGGTCAGGGCAAtt < 1:3516706/71‑1 (MQ=255) cGGCCACAGCGTGGCGGTTGCCAGTAAAAAGACGATAGTCAGGGCAATCAGCAGAATGGTCAGGGCAAttt > 1:878703/1‑71 (MQ=255) | GGGATCAGACAGACCAGCAGCGCCACCAGTACCGTTACGCTGACTGCATTACCGCCCCACGCGGAAAACGGCCACAGCGTGGCGGTTGCCAGTAAAAAGACGATAGTCAGGGCAATCAGCAGAATGGTCAGGGCAATTT > minE/449547‑449685 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |