| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | 704051 = | 36 (0.610) | 5 (0.100) | 3/90 | NT | 13.0% | coding (594/2097 nt) | ymcA | conserved hypothetical protein |
| ? | minE | 704072 = | 35 (0.670) | coding (573/2097 nt) | ymcA | conserved hypothetical protein | |||||
GTTTCAGACGCAGGGGATTCCACGGCGTTTGATACTCAATGCCGCCAAAGATGGAAGCCGGGCCACGAAAGATATCGCTAAAGCTGATATCGCCCGCATCGTGAGACTCTGCGCGATGACAATATTTATCGCTCACCCG > minE/703981‑704119 | gTTTCAGACGCAGGGGATTCCACGGCGTTTGATACTCAATGCCGCCAAAGATGGAAGCCGGGCCACGAAAg < 1:1603867/71‑1 (MQ=255) atattaccaacccgttttgccgggtgagcgataaatattgtcatcgcgcagagtctcacgatgcgggcGat > 1:2369003‑M1/69‑71 (MQ=255) tattaccaacccgttttgccgggtgagcgataaatattgtcatcgcgcagagtctcacgatgcgggcGata < 1:686592‑M1/4‑1 (MQ=255) tCAGACGCAGGGGATTCCACGGCGTTTGATACTCAATGCCGCCAAAGATGGAAGCCGGGCCACGAAAGat > 1:2263479/1‑70 (MQ=255) cAGACGCAGGGGATTCCACGGCGTTTGATACTCAATGCCGCCAAAGATGGAAGCCGGGCCACGAAAGatat > 1:690953/1‑71 (MQ=255) ttaccaacccgttttgccgggtgagcgataaatattgtcatcgcgcagagtctcacgatgcgggcGATATc > 1:3673975‑M1/66‑71 (MQ=255) accaacccgttttgccgggtgagcgataaatattgtcatcgcgcagagtctcacgatgcgggcGa < 1:200237‑M1/2‑1 (MQ=255) gCAGGGGATTCCACGGCGTTTGATACTCAATGCCGCCAAAGATGGAAGCCGGGCCACGAAAGATATCGCt > 1:3016456/1‑70 (MQ=255) gCAGGGGATTCCACGGCGTTTGATACTCAATGCCGCCAAAGATGGAAGCCGGGCCACGAAAGATATCGCTa < 1:3490028/71‑1 (MQ=255) cAGGGGATTCCACGGCGTTTGATACTCAATGCCGCCAAAGATGGAAGCCGGGCCACGAAAGATATCGCTa > 1:1024379/1‑70 (MQ=255) ggggATTCCACGGCGTTTGATACTCAATGCCGCCAAAGATGGAAGCCGGGCCACGAAAGATATCGCTAAAg < 1:2343162/71‑1 (MQ=255) ggggATTCCACGGCGTTTGATACTCAATGCCGCCAAAGATGGAAGCCGGGCCACGAAAGATATCGCTAAAg < 1:2233162/71‑1 (MQ=255) gggATTCCACGGCGTTTGATACTCAATGCCGCCAAAGATGGAAGCCGGGCCACGAAAGATATCGCTAAAGc < 1:2789232/71‑1 (MQ=255) aTTCCACGGCGTTTGATACTCAATGCCGCCAAAGATGGAAGCCGGGCCACGAAAGATATCGGTAAAGCt < 1:1385819/69‑1 (MQ=255) aTTCCACGGCGTTTGATACTCAATGCCGCCAAAGATGGAAGCCGGGCCACGAAAGATATCGCTAAAGCt < 1:938813/69‑1 (MQ=255) aTTCCACGGCGTTTGATACTCAATGCCGCCAAAGATGGAAGCCGGGCCACGAAAGATATCGCTAAAGCt < 1:2144815/69‑1 (MQ=255) gccgggtgagcgataaatattgtcatcgcgcagagtctcacgatgcgggcGATATCGCTAAAGCTGatat > 1:2506099‑M1/51‑70 (MQ=255) cGTTTGATACTCAATGCCGCCAAAGATGGAAGCCGGGCCACGAAAGATATCGCTAAAGCTGATATCGCCCg < 1:1423493/71‑1 (MQ=255) agcgataaatattgtcatcgcgcagagtctcacgatgcgggcGATATCGCTAAAGCTGata > 1:3115586‑M1/43‑61 (MQ=255) agcgataaatattgtcatcgcgcagagtctcacgatgcgggcGATATCGCTAAAGCTGata > 1:682518‑M1/43‑61 (MQ=255) agcgataaatattgtcatcgcgcagagtctcacgatgcgggcGATATCGCTAAAGCTGATATCGc < 1:136506‑M1/23‑1 (MQ=255) tGATACTCAATGCCGCCAAAGATGGAAGCCGGGCCACGAAAGATATCGCTAAAGCTGATATCGCCCGCAt > 1:2469675/1‑70 (MQ=255) tGATACTCAATGCCGCCAAAGATGGAAGCCGGGCCACGAAAGATATCGCTAAAGCTGATATCGCCCGCATc > 1:22043/1‑71 (MQ=255) gcgataaatattgtcatcgcgcagagtctcacgatgcgggcGATATCGCTAAAGCTGata > 1:3086294‑M1/42‑60 (MQ=255) cTCAATGCCGCCAAAGATGGAAGCCGGGCCACGAAAGATATCGCTAAAGCTGATATCGCCCGCATCGTga < 1:1847782/70‑1 (MQ=255) cTCAATGCCGCCAAAGATGGAAGCCGGGCCACGAAAGATATCGCTAAAGCTGATATCGCCCGCATCGTga < 1:1036317/70‑1 (MQ=255) tGCCGCCAAAGATGGAAGCCGGGCCACGAAAGATATCGCTAAAGCTGATATCGCCCGCATCGTGAGActct > 1:3322031/1‑71 (MQ=255) gccgccAAAGATGGAAGCCGGGCCACGAAAGATATCGCTAAAGCTGATATCGCCCGCATCGTGAGACTCTg > 1:2613958/1‑71 (MQ=255) gccgccAAAGATGGAAGCCGGGCCACGAAAGATATCGCTAAAGCTGATATCGCCCGCATCGTGAGACTCTg > 1:347823/1‑71 (MQ=255) ccgccAAAGATGGAAGCCGGGCCACGAAAGATATCGCTAAAGCTGATATCGCCCGCATCGTGAGACTCTg < 1:2421732/70‑1 (MQ=255) gccAAAGATGGAAGCCGGGCCACGAAAGATATCGCTAAAGCTGa > 1:1006516/1‑44 (MQ=255) gccAAAGATGGAAGCCGGGCCACGAAAGATATCGCTAAAGCTGa > 1:2365409/1‑44 (MQ=255) gccAAAGATGGAAGCCGGGCCACGAAAGATATCGCTAAAGCTGa > 1:1985172/1‑44 (MQ=255) gccAAAGATGGAAGCCGGGCCACGAAAGATATCGCTAAAGCTGATATCGCCCGCATCGTGAGACTCTgcgc > 1:1830274/1‑71 (MQ=255) aGATGGAAGCCGGGCCACGAAAGATATCGCTAAAGCTGATATCGCCCGCATCGTGAGACTCTGCGCGATGa > 1:965758/1‑71 (MQ=255) aTGGAAGCCGGGCCACGAAAGATATCGCTAAAGCTGATATCGCCCGCATCGTGAGACTCTGCGCGATGAc > 1:1314096/1‑70 (MQ=255) gAAGCCGGGCCACGAAAGATATCGCTAAAGCTGATATCGCCCGCATCGTGAGACTCTGCGCGATGACAata > 1:3148576/1‑71 (MQ=255) aGCCGGGCCACGAAAGATATCGCTAAAGCTGATATCGCCCGCATCGTGAGACTCTGCGCGATGACAATAtt > 1:400461/1‑71 (MQ=255) aGCCGGGCCACGAAAGATATCGCTAAAGCTGATATCGCCCGCATCGTGAGACTCTGCGCGATGACAATAtt > 1:622096/1‑71 (MQ=255) aGCCGGGCCACGAAAGATATCGCTAAAGCTGATATCGCCCGCATCGTGAGACTCTGCGCGATGACAATAtt > 1:3005198/1‑71 (MQ=255) gCCGGGCCACGAAAGATATCGCTAAAGCTGATATCGCCCGCATCGTGAGACTCTGCGCGATGACAATAttt < 1:3288644/71‑1 (MQ=255) ccGGGCCACGAAAGATATCGCTAAAGCTGATATCGCCCGCATCGTGAGACTCTGCGCGATGa > 1:967988/1‑62 (MQ=255) ccGGGCCACGAAAGATATCGCTAAAGCTGATATCGCCCGCATCGTGAGACTCTGCGCGATGa > 1:2076305/1‑62 (MQ=255) ggCCACGAAAGATATCGCTAAAGCTGATATCGCCCGCATCGTGAGACTCTGCGCGATGACAATATTTATCg > 1:1763240/1‑71 (MQ=255) ggCCACGAAAGATATCGCTAAAGCTGATATCGCCCGCATCGTGAGACTCTGCGCGATGACAATATTTATCg > 1:1016518/1‑71 (MQ=255) ccACGAAAGATATCGCTAAAGCTGATATCGCCCGCATCGTGAGACTCTGCGCGATGACAATATTTATCGCt < 1:1608846/71‑1 (MQ=255) aCGAAAGATATCGCTAAAGCTGATATCGCCCGCATCGTGAGACTCTGCGCGATGACAATATTTATCg < 1:2781661/67‑1 (MQ=255) aCGAAAGATATCGCTAAAGCTGATATCGCCCGCATCGTGAGACTCTGCGCGATGACAATATTTATCg < 1:614337/67‑1 (MQ=255) gAAAGATATCGCTAAAGCTGATATCGCCCGCATCGTGAGACTCTGCGCGAt > 1:1932629/1‑51 (MQ=255) gAAAGATATCGCTAAAGCTGATATCGCCCGCATCGTGAGACTCTGCGCGATGACAATATTTATCGCTCAcc > 1:3683624/1‑71 (MQ=255) gAAAGATATCGCTAAAGCTGATATCGCCCGCATCGTGAGACTCTGCGCGATGACAATATTTATCGCTCAcc > 1:1766226/1‑71 (MQ=255) gAAAGATATCGCTAAAGCTGATATCGCCCGCATCGTGAGACTCTGCGCGATGACAATATTTATCGCTCAcc > 1:1519755/1‑71 (MQ=255) gAAAGATATCGCTAAAGCTGATATCGCCCGCATCGTGAGACTCTGCGCGATGACAATATTTATCGCTCAcc > 1:917363/1‑71 (MQ=255) aaaGATATCGCTAAAGCTGATATCGCCCGCATCGTGAGACTCTGCGCGATGACAATATTTATCGCTCAccc > 1:2817562/1‑71 (MQ=255) aaGATATCGCTAAAGCTGATATCGCCCGCATCGTGAGACTCTGCGCGATGACAATATTTATCGCTCACCCg < 1:1475053/71‑1 (MQ=255) aaGATATCGCTAAAGCTGATATCGCCCGCATCGTGAGACTCTGCGCGATGACAATATTTATCGCTCACCCg < 1:1407577/71‑1 (MQ=255) aGATATCGCTAAAGCTGATATCGCCCGCATCGTGAGACTCTGCGCGATGCCAATATTTATCGCTCACCCg > 1:1317538/1‑70 (MQ=255) | GTTTCAGACGCAGGGGATTCCACGGCGTTTGATACTCAATGCCGCCAAAGATGGAAGCCGGGCCACGAAAGATATCGCTAAAGCTGATATCGCCCGCATCGTGAGACTCTGCGCGATGACAATATTTATCGCTCACCCG > minE/703981‑704119 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |