| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | 889667 = | 75 (1.270) | 9 (0.160) | 3/96 | NT | 11.5% | coding (327/789 nt) | fabI | enoyl‑[acyl‑carrier‑protein] reductase, NADH‑dependent |
| ? | minE | 889691 = | 68 (1.220) | coding (303/789 nt) | fabI | enoyl‑[acyl‑carrier‑protein] reductase, NADH‑dependent | |||||
AGCGGCAAGCTTTTGCCATTGCAACGAAGCTGTAGGAGCTGATGTCGTGGGCAATTTTGAAGCCTTCACGGGTAACGGCGTTAACATAGTCACCATCCAGCTGATCGCCAGGTGCAAAACCAATAGAGTGTACGAAACCG > minE/889597‑889736 | aGCGGCAAGCTTTTGCCATTGCAACGAAGCTGTAGGAGCTGATGTCGTGGGCAATTTTGAAGCCTTCACgg > 1:1300054/1‑71 (MQ=255) gggaaagtttggccgaaatttgacggtttcgtacactctattggttttgcacctggcgatcagctggatgg > 1:3439415‑M1/70‑71 (MQ=255) ggCAAGCTTTTGCCATTGCAACGAAGCTGTAGGAGCTGATGTCGTGGGCAATTTTGAAGCCTTCACGGGt > 1:2267045/1‑70 (MQ=255) aaGCTTTTGCCATTGCAACGAAGCTGTAGGAGCTGATGTCGTGGGCAATTTTGAAGCCTTCACGGGTAACg < 1:2909957/71‑1 (MQ=255) gCTTTTGCCATTGCAACGAAGCTGTAGGAGCTGATGTCGTGGGCAATTTTGAAGCCTTCACGGGTAACGGc < 1:2317383/71‑1 (MQ=255) gCTTTTGCCATTGCAACGAAGCTGTAGGAGCTGATGTCGTGGGCAATTTTGAAGCCTTCACGGGTAACGGc < 1:3660394/71‑1 (MQ=255) ttttGCCATTGCAACGAAGCTGTAGGAGCTGATGTCGTGGGCAATTTTGAAGCCTTCACGGGTAACGGCGt > 1:1556622/1‑71 (MQ=255) ttttGCCATTGCAACGAAGCTGTAGGAGCTGATGTCGTGGGCAATTTTGAAGCCTTCACGGGTAACGGCGt > 1:641717/1‑71 (MQ=255) ttttGCCATTGCAACGAAGCTGTAGGAGCTGATGTCGTGGGCAATTTTGAAGCCTTCACGGGTAACGGCGt > 1:138355/1‑71 (MQ=255) ccATTGCAACGAAGCTGTAGGAGCTGATGTCGTGGGCAATTTTGAAGCCTTCACGGGTAACGGCGTTAAc < 1:1698353/70‑1 (MQ=255) ttGCAACGAAGCTGTAGGAGCTGATGTCGTGGGCAATTTTGAAGCCTTCACGGGTAACgg > 1:666431/1‑60 (MQ=255) ttGCAACGAAGCTGTAGGAGCTGATGTCGTGGGCAATTTTGAAGCCTTCACGGGTAACGGCGtt < 1:2734278/64‑1 (MQ=255) ttGCAACGAAGCTGTAGGAGCTGATGTCGTGGGCAATTTTGAAGCCTTCACGGGTAACGGCGtt < 1:700592/64‑1 (MQ=255) ttGCAACGAAGCTGTAGGAGCTGATGTCGTGGGCAATTTTGAAGCCTTCACGGGTAACGGCGt < 1:995428/63‑1 (MQ=255) ttGCAACGAAGCTGTAGGAGCTGATGTCGTGGGCAATTTTGAAGCCTTCACGGGTAACGGCGt < 1:549334/63‑1 (MQ=255) ttGCAACGAAGCTGTAGGAGCTGATGTCGTGGGCAATTTTGAAGCCTTCACGGGTAACGGCGTTAACATAg > 1:1838477/1‑71 (MQ=255) gCAACGAAGCTGTAGGAGCTGATGTCGTGGGCAATTTTGAAGCCTTCACGGGTAACGGCGTTAACATAGt > 1:2181960/1‑70 (MQ=255) cAACGAAGCTGTAGGAGCTGATGTCGTGGGCAATTTTGAAGCCTTCACGGGTAACGGCg < 1:1456673/59‑1 (MQ=255) cAACGAAGCTGTAGGAGCTGATGTCGTGGGCAATTTTGAAGCCTTCACGGGTAACGGCGTTAACATAGTCa < 1:2984188/71‑1 (MQ=255) aaCGAAGCTGTAGGAGCTGATGTCGTGGGCAATTTTGAAGCCTTCACGTGTAACGGCGTTAACATAGTCAc > 1:1229830/1‑71 (MQ=255) aaCGAAGCTGTAGGAGCTGATGTCGTGGGCAATTTTGAAGCCTTCACGGGTAACGGCGTTAACATAGTCAc < 1:584159/71‑1 (MQ=255) aaCGAAGCTGTAGGAGCTGATGTCGTGGGCAATTTTGAAGCCTTCACGGGTAACGGCGTTAACATAGTCAc < 1:1122167/71‑1 (MQ=255) aCGAAGCTGTAGGAGCTGATGTCGTGGGCAATTTTGAAGCCTTCACGGGTAACGGCGTTAACATAGTCAc > 1:3096584/1‑70 (MQ=255) cGAAGCTGTAGGAGCTGATGTCGTGGGCAATTTTGAAGCCTTCACGGGTAACGGCGTTAACATAGTCACCa > 1:575183/1‑71 (MQ=255) aaGCTGTAGGAGCTGATGTCGTGGGCAATTTTGAAGCCTTCACGGGTAACGGCGTTAACATAGTCACCATc > 1:3036289/1‑71 (MQ=255) aGCTGTAGGAGCTGATGTCGTGGGCAATTTTGAAGCCTTCACggg > 1:865164/1‑45 (MQ=255) aGCTGTAGGAGCTGATGTCGTGGGCAATTTTGAAGCCTTCACGGGTAACGGCGTTAACATAGTCACCAtac < 1:3190752/71‑3 (MQ=255) aGCTGTAGGAGCTGATGTCGTGGGCAATTTTGAAGCCTTCACGGGTAACGGCGTTAACATAGTCACCATc > 1:437956/1‑70 (MQ=255) tAGGAGCTGATGTCGTGGGCAATTTTGAAGCCTTCACGGGTAACGGCGTTAACATAGTCACCATCCAGCTg < 1:2420912/71‑1 (MQ=255) tAGGAGCTGATGTCGTGGGCAATTTTGAAGCCTTCACGGGTAACGGCGTTAACATAGTCACCATCCAGCTg < 1:3169085/71‑1 (MQ=255) aGGAGCTGATGTCGTGGGCAATTTTGAAGCCTTCACGGGTAACGGCGTTAACATAGTCACCATCCAGCTGa > 1:867825/1‑71 (MQ=255) ggAGCTGATGTCGTGGGCAATTTTGAAGCCTTCACGGGTAACGGCGTTAACATAGTCACCATCCAGCTGAt < 1:1740810/71‑1 (MQ=255) aGCTGATGTCGTGGGCAATTTTGAAGCCTTCACGGGTAACGGCGTTAACATAGTCACCATCCAGCTGATCg < 1:2234463/71‑1 (MQ=255) gATGTCGTGGGCAATTTTGAAGCCTTCACGGGTAACGGCGTTAACATAg > 1:717473/1‑49 (MQ=255) gATGTCGTGGGCAATTTTGAAGCCTTCACGGGTAACGGCGTTAACATAGTCACCATcc < 1:137365/58‑1 (MQ=255) gATGTCGTGGGCAATTTTGAAGCCTTCACGGGTAACGGCGTTAACATAGTCACCATCCAGCTGATCGCCAg > 1:284296/1‑71 (MQ=255) gATGTCGTGGGCAATTTTGAAGCCTTCACGGGTAACGGCGTTAACATAGTCACCATCCAGCTGATCGCCAg > 1:2130037/1‑71 (MQ=255) gATGTCGTGGGCAATTTTGAAGCCTTCACGGGTAACGGCGTTAACATAGTCACCATCCAGCTGATCGCCAg > 1:1930668/1‑71 (MQ=255) aTGTCGTGGGCAATTTTGAAGCCTTCACGGGTAACGGCGTTAACATAGTCACCATCCAGCTGATCGcc < 1:230717/68‑1 (MQ=255) aTGTCGTGGGCAATTTTGAAGCCTTCACGGGTAACGGCGTTAACATAGTCACCATCCAGCTGATCGCCAg < 1:3409136/70‑1 (MQ=255) aTGTCGTGGGCAATTTT‑AAGCCTTCACGGGTAACGGCGTTAACATAGTCACCATCCAGCTGATCGcc < 1:360043/67‑1 (MQ=255) tggttttgcacctggcgatcagctggatGGTAACGGCGTTAACATAGTCAcc > 1:2788395‑M1/29‑52 (MQ=255) tggttttgcacctggcgatcagctggatGGTAACGGCGTTAACATAGTCAcc > 1:1157517‑M1/29‑52 (MQ=255) tggttttgcacctggcgatcagctggatGGTAACGGCGTTAACATAGTCAcc > 1:2268881‑M1/29‑52 (MQ=255) tGTCGTGGGCAATTTTGAAGCCTTCACGGGTAACGGCGTTAACATa < 1:3486211/46‑1 (MQ=255) tGTCGTGGGCAATTTTGAAGCCTTCACGGGTAACGGCGTTAACATAGTCACCATCCAGCTGATCGCCAGGt > 1:125802/1‑71 (MQ=255) tGTCGTGGGCAATTTTGAAGCCTTCACGGGTAACGGCGTTAACATAGTCACCATCCAGCTGATCGCCAGGt > 1:3307360/1‑71 (MQ=255) ttttgcacctggcgatcagctggatGGTAACGGCGTTAACATAg > 1:3195205‑M1/26‑44 (MQ=255) ttttgcacctggcgatcagctggatGGTAACGGCGTTAACATAg > 1:3188989‑M1/26‑44 (MQ=255) ttttgcacctggcgatcagctggatGGTAACGGCGTTAACATAg > 1:1758295‑M1/26‑44 (MQ=255) ttttgcacctggcgatcagctggatGGTAACGGCGTTAACATAg > 1:1875152‑M1/26‑44 (MQ=255) gTGGGCAATTTTGAAGCCTTCACGGGTAACGGCGTTAACATAGTCACCATCCAGCTGATCGCCAGGTGCaa < 1:1886587/71‑1 (MQ=255) gTGGGCAATTTTGAAGCCTTCACGGGTAACGGCGTTAACATAGTCACCATCCAGCTGATCGCCAGGTGCaa < 1:3072024/71‑1 (MQ=255) gTGGGCAATTTTGAAGCCTTCACGGGTAACGGCGTTAACATAGTCACCATCCAGCTGATCGCCAGGTGCaa < 1:3089375/71‑1 (MQ=255) ttgcacctggcgatcagctggatGGTAACGGCGTTAACATAGTc < 1:267525‑M1/21‑1 (MQ=255) ttgcacctggcgatcagctggatGGTAACGGCGTTAACATAGTc < 1:1033868‑M1/21‑1 (MQ=255) tGGGCAATTTTGAAGCCTTCACGGGTAACGGCGTTAACATAGTCACCATCCAGCTGATCGCCAGGTGCaa < 1:851673/70‑1 (MQ=255) gggCAATTTTGAAGCCTTCACGGGTAACGGCGTTAACATAGTCACCATCCAGCTGATCGCCAGGTGCaaaa > 1:2359807/1‑71 (MQ=255) gggCAATTTTGAAGCCTTCACGGGTAACGGCGTTAACATAGTCACCATCCAGCTGATCGCCAGGTGCaaaa > 1:1972948/1‑71 (MQ=255) ggCAATTTTGAAGCCTTCACGGGTAACGGCGTTAACATAGTCACCATCCAGCTGATCGCCAGGTGCaaaa < 1:1644219/70‑1 (MQ=255) gCAATTTTGAAGCCTTCACGGGTAACGGCGTTAACATAGTCACCATCCAGCTGATCGCCAGGTGCAAAAc > 1:1819721/1‑70 (MQ=255) cAATTTTGAAGCCTTCACGGGTAACGGCGTTAACATAGTCACCATCCAGCTGATCGCCAg < 1:744603/60‑1 (MQ=255) cAATTTTGAAGCCTTCACGGGTAACGGCGTTAACATAGTCACCATCCAGCTGATCGCCAg < 1:203512/60‑1 (MQ=255) aTTTTGAAGCCTTCACGGGTAACGGCGTTAACATAGTCACCATCCAGCTGATCGCCAGGTGCAAAACCaa > 1:2166248/1‑70 (MQ=255) ttttGAAGCCTTCACGGGTAACGGCGTTAACATAGTCACCATcc < 1:2628209/44‑1 (MQ=255) ttttGAAGCCTTCACGGGTAACGGCGTTAACATAGTCACCATcc < 1:2539203/44‑1 (MQ=255) ttttGAAGCCTTCACGGGTAACGGCGTTAACATAGTCACCATCCAGCTGATCGCCAGGTGCAAAACCaa > 1:3123574/1‑69 (MQ=255) ttGAAGCCTTCACGGGTAACGGCGTTAACATAGTCACCATCCAGCTGATCGCCAGGTGCAAAAcc < 1:3721389/65‑1 (MQ=255) ttGAAGCCTTCACGGGTAACGGCGTTAACATAGTCACCATCCAGCTGATCGCCAGGTGCAAAACCa > 1:1175069/1‑66 (MQ=255) ttGAAGCCTTCACGGGTAACGGCGTTAACATAGTCACCATCCAGCTGATCGCCAGGTGCAAAACCAATa > 1:3050056/1‑69 (MQ=255) ttGAAGCCTTCACGGGTAACGGCGTTAACATAGTCACCATCCAGCTGATCGCCAGGTGCAAAACCAATa > 1:2294945/1‑69 (MQ=255) tGAAGCCTTCACGGGTAACGGCGTTAACATAGTCACCAt < 1:3158543/39‑1 (MQ=255) tGAAGCCTTCACGGGTAACGGCGTTAACATAGTCACCATcc > 1:2381613/1‑41 (MQ=255) tGAAGCCTTCACGGGTAACGGCGTTAACATAGTCACCATcc > 1:1148895/1‑41 (MQ=255) tGAAGCCTTCACGGGTAACGGCGTTAACATAGTCACCATCCAGCTGATCGCCAGGTGCAAAACCAATaga < 1:2893847/70‑1 (MQ=255) tGAAGCCTTCACGGGTAACGGCGTTAACATAGTCACCATCCAGCTGATCGCCAGGTGCAAAACCAATaga < 1:566843/70‑1 (MQ=255) aGCCTTCACGGGTAACGGCGTTAACATAGTCACCATCCAGCTg < 1:3645524/43‑1 (MQ=255) aGCCTTCACGGGTAACGGCGTTAACATAGTCACCATCCAGCTg < 1:1112813/43‑1 (MQ=255) aGCCTTCACGGGTAACGGCGTTAACATAGTCACCATCCAGCTg < 1:1707557/43‑1 (MQ=255) aGCCTTCACGGGTAACGGCGTTAACATAGTCACCATCCAGCTGATCGCCAGGTGCAAAACCAATAGAgtgt < 1:1081713/71‑1 (MQ=255) aGCCTTCACGGGTAACGGCGTTAACATAGTCACCATCCAGCTGATCGCCAGGTGCAAAACCAATAGAgtgt < 1:1150182/71‑1 (MQ=255) aGCCTTCACGGGTAACGGCGTTAACATAGTCACCATCCAGCTGATCGCCAGGTGCAAAACCAATAGAgtg > 1:2249729/1‑70 (MQ=255) aGCCTTCACGGGTAACGGCGTTAACATAGTCACCATCCAGCTGATCGCCAGGTGCAAAACCAATAGAgtg > 1:3281833/1‑70 (MQ=255) gCCTTCACGGGTAACGGCGTTAACATAGTCACCATCCAGCTGATCGCCAGGTGCAAAACCAATAGAGTGTa > 1:2495556/1‑71 (MQ=255) ccTTCACGGGTAACGGCGTTAACATAGTCACCATCCAGCTGAt > 1:752384/1‑43 (MQ=255) ccTTCACGGGTAACGGCGTTAACATAGTCACCATCCAGCTGAt > 1:3263968/1‑43 (MQ=255) ccTTCACGGGTAACGGCGTTAACATAGTCACCATCCAGCTGAt > 1:252265/1‑43 (MQ=255) ccTTCACGGGTAACGGCGTTAACATAGTCACCATCCAGCTGATCGCCAGGt > 1:2928118/1‑51 (MQ=255) cACGGGTAACGGCGTTAACATAGTCACCATCCAGCTGATCGCCAGGTGCAAAACCAATAGAGTGTACGaa < 1:1386180/70‑1 (MQ=255) cACGGGTAACGGCGTTAACATAGTCACCATCCAGCTGATCGCCAGGTGCAAAACCAATAGAGTGTACGa < 1:3396944/69‑1 (MQ=255) aCGGGTAACGGCGTTAACATAGTCACCATCCAGCTGATCGCCAGGTGCAAAACCAATAGAGTGTACGaaa < 1:549885/70‑1 (MQ=255) aCGGGTAACGGCGTTAACATAGTCACCATCCAGCTGATCGCCAGGTGCAAAACCAATAGAGTGTACGAAAc > 1:132966/1‑71 (MQ=255) aCGGGTAACGGCGTTAACATAGTCACCATCCAGCTGATCGCCAGGTGCAAAACCAATAGAGTGTACGAAAc < 1:2518784/71‑1 (MQ=255) gggTAACGGCGTTAACATAGTCACCATCCAGCTGATCGCCAGGTGCAAAACCAATAGAGTGTACGAAACCg > 1:2309730/1‑71 (MQ=255) | AGCGGCAAGCTTTTGCCATTGCAACGAAGCTGTAGGAGCTGATGTCGTGGGCAATTTTGAAGCCTTCACGGGTAACGGCGTTAACATAGTCACCATCCAGCTGATCGCCAGGTGCAAAACCAATAGAGTGTACGAAACCG > minE/889597‑889736 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |