| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | 1405274 = | 52 (0.880) | 4 (0.080) | 3/88 | NT | 9.4% | coding (1479/1815 nt) | yejA | predicted oligopeptide transporter subunit |
| ? | minE | 1405305 = | 32 (0.630) | coding (1510/1815 nt) | yejA | predicted oligopeptide transporter subunit | |||||
CACTAACCGCATGCGCAGTCGCGACTATGACATGATGCCGCGCGTATGGCGGGCGATGCCGTGGCCCAGTTCCGATTTACAGATTTCCTGGTCATCGGAATATATCAATTCCACTTATAATGCCCCCGGCGTGCAAAGC > minE/1405205‑1405343 | cACTAACCGCATGCGCAGTCGCGACTATGACATGATGCCGCGCGTATGGCGGGCGATGCCGTGGCCCAGtt > 1:3026450/1‑71 (MQ=255) atttggttgatcagcgagtcgataaccgggctttgcacgccgcgggcattataagtggaattgatatatt < 1:2670596‑M1/2‑1 (MQ=255) aaCCGCATGCGCAGTCGCGACTATGACATGATGCCGCGCGTATGGCGGGCGATGCCGTGGCCCATTTCCGa > 1:2703237/1‑71 (MQ=255) aCCGCATGCGCAGTCGCGACTATGACATGATGCCGCGCGTATGGCGGGCGATGCCGTGGCCCAGTTCCGAt < 1:3146079/71‑1 (MQ=255) gttgatcagcgagtcgataaccgggctttgcacgccgggggcaatataagtggaattgatataTTCCGAt < 1:82824‑M1/7‑1 (MQ=255) cGCATGCGCAGTCGCGACTATGACATGATGCCGCGCGTATGGCGGGCGATGCCGTGGCCCAGTTCCGAttt < 1:819509/71‑1 (MQ=255) cGCATGCGCAGTCGCGACTATGACATGATGCCGCGCGTATGGCGGGCGATGCCGTGGCCCAGTTCCGAtt > 1:2272829/1‑70 (MQ=255) cATGCGCAGTCGCGACTATGACATGATGCCGCGCGTATGGCGGGCGATGCCGTGGCCCAGTTCCGATTTa > 1:3156799/1‑70 (MQ=255) cATGCGCAGTCGCGACTATGACATGATGCCGCGCGTATGGCGGGCGATGCCGTGGCCCAGTTCCGATTTAc < 1:349760/71‑1 (MQ=255) aTGCGCAGTCGCGACTATGACATGATGCCGCGCGTATGGCGGGCGATGCCGTGGCCCAGTTCCGATTTa > 1:415822/1‑69 (MQ=255) aTGCGCAGTCGCGACTATGACATGATGCCGCGCGTATGGCGGGCGATGCCGTGGCCCAGTTCCGATTTAc < 1:354232/70‑1 (MQ=255) aTGCGCAGTCGCGACTATGACATGATGCCGCGCGTATGGCGGGCGATGCCGTGGCCCAGTTCCGATTTACa < 1:2059179/71‑1 (MQ=255) cgcAGTCGCGACTATGACATGATGCCGCGCGTATGGCGGGCGATGCCGTGGCCCAGTTCCGATTTACAGAt < 1:1875892/71‑1 (MQ=255) gcAGTCGCGACTATGACATGATGCCGCGCGTATGGCGGGCGATGCCGTGGCCCAGTTCCGATTTACAGAtt < 1:3492456/71‑1 (MQ=255) gcAGTCGCGACTATGACATGATGCCGCGCGTATGGCGGGCGATGCCGTGGCCCAGTTCCGATTTACAGAtt < 1:1107857/71‑1 (MQ=255) cAGTCGCGACTATGACATGATGCCGCGCGTATGGCGGGCGATGCCGTGGCCCAGtt > 1:41350/1‑56 (MQ=255) cAGTCGCGACTATGACATGATGCCGCGCGTATGGCGGGCGATGCCGTGGCCCAGtt > 1:1052180/1‑56 (MQ=255) cAGTCGCGACTATGACATGATGCCGCGCGTATGGCGGGCGATGCCGTGGCCCAGTTCCGATTTACAGAttt < 1:2988171/71‑1 (MQ=255) gTCGCGACTATGACATGATGCCGCGCGTATGGCGGGCGATGCCGTGGCCCAGTTCCGATTTACAGATTTcc > 1:3209894/1‑71 (MQ=255) gTCGCGACTATGACATGATGCCGCGCGTATGGCGGGCGATGCCGTGGCCCAGTTCCGATTTACAGATTTcc < 1:2051785/71‑1 (MQ=255) gcgACTATGACATGATGCCGCGCGTATGGCGGGCGATGCCGTGGCCCAGTTCCGATTTACAGATTTCCTgg > 1:781293/1‑71 (MQ=255) gACTATGACATGATGCCGCGCGTATGGCGGGCGATGCCGTGGCCCAGTTCCGATTTACAGATTTCCTGGTc < 1:1405070/71‑1 (MQ=255) gACTATGACATGATGCCGCGCGTATGGCGGGCGATGCCGTGGCCCAGTTCCGATTTACAGATTTCCTGGTc < 1:2885360/71‑1 (MQ=255) gACTATGACATGATGCCGCGCGTATGGCGGGCGATGCCGTGGCCCAGTTCCGATTTACAGATTTCCTGGTc < 1:2076293/71‑1 (MQ=255) aCTATGACATGATGCCGCGCGTATGGCGGGCGATGCCGTGGCCCAGTTCCGATTTACAGATTTCCTGGTCa > 1:2581011/1‑71 (MQ=255) aCTATGACATGATGCCGCGCGTATGGCGGGCGATGCCGTGGCCCAGTTCCGATTTACAGATTTCCTGGTCa > 1:651144/1‑71 (MQ=255) cTATGACATGATGCCGCGCGTATGGCGGGCGATGCCGTGGCCCAGTTCCGATTTACAGATTTCCTGGTCAt > 1:1838509/1‑71 (MQ=255) aTGACATGATGCCGCGCGTATGTCGGGCGATGCCGTGGCCCAGTTCCGATTTACAGAttt > 1:1348187/1‑60 (MQ=255) aTGACATGATGCCGCGCGTATGGCGGGCGATGCCGTGGCCCAGTTCCGATTTACAGATTTCCTGGTCATCg > 1:262836/1‑71 (MQ=255) tGACATGATGCCGCGCGTATGGCGGGCGATGCCGTGGCCCAGTTCCGATTTACAGATTTCCTGGTc < 1:31599/66‑1 (MQ=255) cgggctttgcacgccgggggcattataagtggaattgatataTTCCGATTTACAGATTTCCTGGTCATCgg > 1:807715‑M1/43‑71 (MQ=255) gggctttgcacgccgggggcattataagtggaattgatataTTCCGATTTACAGATTTCCTGGTCATCGGa > 1:3371115‑M1/42‑71 (MQ=255) aCATGATGCCGCGCGTATGGCGGGCGATGCCGTGGCCCAGTTCCGATTTACAGATTTCCTGGTCATCGGaa > 1:179229/1‑71 (MQ=255) cATGATGCCGCGCGTATGGCGGGCGATGCCGTGGCCCAGTTCCGATTTACAGATTTCCTGGTCATCGGaa < 1:1499234/70‑1 (MQ=255) tgatgCCGCGCGTATGGCGGGCGATGCCGTGGCCCAGTTCCGATTTACAGATTTCCTGGTCATCGGAatat < 1:1924653/71‑1 (MQ=255) atgCCGCGCGTATGGCGGGCGATGCCGTGGCCCAGTTCCGATTTACAGATTTCCTGGTCATCGGAatatat < 1:1282933/71‑1 (MQ=255) atgCCGCGCGTATGGCGGGCGATGCCGTGGCCCAGTTCCGATTTACAGATTTCCTGGTCATCGGAatatat < 1:2003305/71‑1 (MQ=255) atgCCGCGCGTATGGCGGGCGATGCCGTGGCCCAGTTCCGATTTACAGATTTCCTGGTCATCGGAatata < 1:498916/70‑1 (MQ=255) atgCCGCGCGTATGGCGGGCGATGCCGTGGCCCAGTTCCGATTTACAGATTTCCTGGTCATCGGAatata > 1:3390547/1‑70 (MQ=255) atgCCGCGCGTATGGCGGGCGATGCCGTGGCCCAGTTCCGATTTACAGATTTCCTGGTCATCGGAata > 1:2322326/1‑68 (MQ=255) ccGCGCGTATGGCGGGCGATGCCGTGGCCCAGTTCCGATTTACa < 1:645408/44‑1 (MQ=255) ccGCGCGTATGGCGGGCGATGCCGTGGCCCAGTTCCGATTTACAGATTTCCTGGTCATCGGAATATATCaa < 1:2954921/71‑1 (MQ=255) cgcgTATGGCGGGCGATGCCGTGGCCCAGTTCCGATTTACAGATTTCCTGGTCATCGGAATATATCAATTc < 1:1287120/71‑1 (MQ=255) gcgTATGGCGGGCGATGCCGTGGCCCAGTTCCGATTTACAGATTTCCTGGTCATc > 1:733791/1‑55 (MQ=255) gcgTATGGCGGGCGATGCCGTGGCCCAGTTCCGATTTACAGATTTCCTGGTCATCGGAATATATCAATTc < 1:2620710/70‑1 (MQ=255) cgggggcattataagtggaattgatataTTCCGATTTACAGATTTCCTGGTCATCgg < 1:2213048‑M1/29‑1 (MQ=255) cgggggcattataagtggaattgatataTTCCGATTTACAGATTTCCTGGTCATCgg < 1:3233573‑M1/29‑1 (MQ=255) cgTATGGCGGGCGATGCCGTGGCCCAGTTCCGATTTa < 1:3153386/37‑1 (MQ=255) cgTATGGCGGGCGATGCCGTGGCCCAGTTCCGATTTa < 1:1891389/37‑1 (MQ=255) cgTATGGCGGGCGATGCCGTGGCCCAGTTCCGATTTACAGATTTCCTGGTCATCGGAATATATCAATTCCa < 1:895389/71‑1 (MQ=255) gTATGGCGGGCGATGCCGTGGCCCAGTTCCGATTTa < 1:1176051/36‑1 (MQ=255) gTATGGCGGGCGATGCCGTGGCCCAGTTCCGATTTACAGATTTCCTGGTCATCGGAATATATCAAt < 1:3516613/66‑1 (MQ=255) aTGGCGGGCGATGCCGTGGCCCAGTTCCGATTTACAGATTTCCTGGTCATCGGAATATATCAATTc > 1:55629/1‑66 (MQ=255) gggcgATGCCGTGGCCCAGTTCCGATTTACAGATTTCCTGGTCATCGGAatatat > 1:109625/1‑55 (MQ=255) ggcgATGCCGTGGCCCAGTTCCGATTTACAGATTTCCTGGTCATCGGAATATATCAATTCCACTTATaa > 1:486193/1‑69 (MQ=255) ccGTGGCCCAGTTCCGATTTACAGATTTCCTGGTCATCGGAATATATCAATTCCACTTATAATGCCCCCgg > 1:3488405/1‑71 (MQ=255) cGTGTCCCAGTTCCGATTTACAGATTTCCTGGTCATCGGAATATATCAATTCCACTTATAATGCCCCCGGc < 1:2978119/71‑1 (MQ=255) cGTGGCCCAGTTCCGATTTACAGATTTCCTGGTCATCGGAATATATCAATTCCACt < 1:1562336/56‑1 (MQ=255) cGTGGCCCAGTTCCGATTTACAGATTTCCTGGTCATCGGAATATATCAATTCCACTTATAATGCCCCCGGc < 1:1404114/71‑1 (MQ=255) tGGCCCAGTTCCGATTTACAGATTTCCTGGTCATCGGAATATATCAATTCCACTTATAATGCCCCCGGCGt > 1:637897/1‑71 (MQ=255) gCCCAGTTCCGATTTACAGATTTCCTGGTCATCgg < 1:3348773/35‑1 (MQ=255) ccAGTTCCGATTTACAGATTTCCTGGTCATCGGAATATATCAATTCCACTTATAATGCCCCCg < 1:2585712/63‑1 (MQ=255) ccAGTTCCGATTTACAGATTTCCTGGTCATCGGAATATATCAATTCCACTTATAATGCCCCCg < 1:1728528/63‑1 (MQ=255) ccAGTTCCGATTTACAGATTTCCTGGTCATCGGAATATATCAATTCCACTTATAATGCCCCCg < 1:1304296/63‑1 (MQ=255) ccAGTTCCGATTTACAGATTTCCTGGTCATCGGAATATATCAATTCCACTTATAATGCCCCCGGCGTGCa > 1:335886/1‑70 (MQ=255) cAGTTCCGATTTACAGATTTCCTGGTCATCGGAATATATCAATTCCACTTATAATGCCCCCGGCGTGCa > 1:341719/1‑69 (MQ=255) aGTTCCGATTTACAGATTTCCTGGTCATCGGAATATATCAATTCCACTTATAATGCCCCCGGCGTGCAAAg > 1:3738098/1‑71 (MQ=255) aGTTCCGATTTACAGATTTCCTGGTCATCGGAATATATCAATTCCACTTATAATGCCCCCGGCGTGCAAAg < 1:516250/71‑1 (MQ=255) gTTCCGATTTACAGATTTCCTGGTCATCGGAATATATCAAtt < 1:3486164/42‑1 (MQ=255) gTTCCGATTTACAGATTTCCTGGTCATCGGAATATATCAAtt < 1:1394173/42‑1 (MQ=255) gTTCCGATTTACAGATTTCCTGGTCATCGGAATATATCAAtt < 1:108330/42‑1 (MQ=255) gTTCCGATTTACAGATTTCCTGGTCATCGGAATATATCAATTCCACTTATAATGCCCCCGGCGTGCAAAGc > 1:2866713/1‑71 (MQ=255) TTCCGATTTACAGATTTCCTGGTCATCGGAATATATCAATTCCACTTATAATGcccc > 1:3410431‑M1/1‑57 (MQ=255) | CACTAACCGCATGCGCAGTCGCGACTATGACATGATGCCGCGCGTATGGCGGGCGATGCCGTGGCCCAGTTCCGATTTACAGATTTCCTGGTCATCGGAATATATCAATTCCACTTATAATGCCCCCGGCGTGCAAAGC > minE/1405205‑1405343 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |