| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | 1468984 = | 43 (0.730) | 5 (0.090) | 3/92 | NT | 11.4% | coding (2738/3753 nt) | yfaL | adhesin |
| ? | minE | 1469005 = | 39 (0.730) | coding (2717/3753 nt) | yfaL | adhesin | |||||
GGCGTGGGATCAGGATCGGGAGTCGGGTCTGGATCAGGTGGCGATGGCGGCGTTACTTCTTGCGATCGCAGATACCAGTCGTTGTTATCTTCCACCAGCGTGTAGTCATACGCTCCCATATTGACGTAGCCGCTGCCTGC > minE/1468915‑1469054 | caatgcgcagttcagtctggcaggcagcggctacgtcaatatgggagcgtatgactacacgctggtggaAg > 1:3276391‑M1/70‑71 (MQ=255) gCGTGGGATCAGGATCGGGAGTCGGGTCTGGATCAGGTGGCGATGGCGGCGTTACTTCTTGCGATCGCAGa < 1:660257/71‑1 (MQ=255) tgcgcagttcagtctggcaggcagcggctacgtcaatatgggagcgtatgactacacgctggtggaAGATa > 1:1152548‑M1/67‑71 (MQ=255) ttcagtctggcaggcagcggctacgtcaatatgggagcgtatgactacacgctggtggaAg > 1:3423463‑M1/60‑61 (MQ=255) aGGATCGGGAGTCGGGTCTGGATCAGGTGGCGATGGCGGCGTTACTTCTTGCGATCGCAGATACCAGTCgt < 1:1395797/71‑1 (MQ=255) tCGGGAGTCGGGTCTGGATCAGGTGGCGATGGCGGCGTTACTTCTTGCGATCGCAGATACCAGTCgttgt > 1:637329/1‑70 (MQ=255) gggAGTCGGGTCTGGATCAGGTGGCGATGGCGGCGTTACTTCTTGCGATCGCAGATACCAGTCgttgt > 1:3656746/1‑68 (MQ=255) gcaggcagcggctacgtcaatatgggagcgtatgactacacgctggtggaAGATACCAGTCGTTGTTATc > 1:3282397‑M1/51‑70 (MQ=255) gcaggcagcggctacgtcaatatgggagcgtatgactacacgctggtggaAGATACCAGTCGTTGTTATCt > 1:3145698‑M1/51‑71 (MQ=255) aGTCGGGTCTGGATCAGGTGGCGATGGCGGCGTTACTTCTTGCGATCGCAGATACCAGTCGTTGTTATCt > 1:1096285/1‑70 (MQ=255) tCGGGTCTGGATCAGGTGGCGATGGCGGCGTTACTTCTTGCGATCGCa < 1:2025350/48‑1 (MQ=255) cTGGATCAGGTGGCGATGGCGGCGTTACTTCTTGCGATCGCAGATACCAGTCGTTGTTa > 1:788288/1‑59 (MQ=255) tGGATCAGGTGGCGATGGCGGCGTTACTTCTTGCGATCGCa > 1:2129338/1‑41 (MQ=255) gATCAGGTGGCGATGGCGGCGTTACTTCTTGCGATCGCAGATACCAGTCGTTGTTATCTTccac > 1:3264073/1‑64 (MQ=255) gATCAGGTGGCGATGGCGGCGTTACTTCTTGCGATCGCAGATACCAGTCGTTGTTATCTTccac > 1:2115372/1‑64 (MQ=255) gATCAGGTGGCGATGGCGGCGTTACTTCTTGCGATCGCAGATACCAGTCGTTGTTATCTTCCACCAGCgtg < 1:1817042/71‑1 (MQ=255) gATCAGGTGGCGATGGCGGCGTTACTTCTTGCGATCGCAGATACCAGTCGTTGTTATCTTCCACCAGCgtg < 1:149923/71‑1 (MQ=255) gATCAGGTGGCGATGGCGGCGTTACTTCTTGCGATCGCAGATACCAGTCGTTGTTATCTTCCACCAGCg < 1:3554077/69‑1 (MQ=255) gATCAGGTGGCGATGGCGGCGTTACTTCTTGCGATCGCAGATACCAGTCGTTGTTATCTTCCACCAGCg < 1:3690525/69‑1 (MQ=255) gATCAGGTGGCGATGGCGGCGTTACTTCTTGCGATCGCAGATACCAGTCGTTGTTATCTTCCACCAGCg < 1:2528155/69‑1 (MQ=255) aTCAGGTGGCGATGGCGGCGTTACTTCTTGCGATCGCAGATACCAGTCgttgtt > 1:3693115/1‑54 (MQ=255) tCAGGTGTCGATGGCGGCGTTACTTCTTGCGATCGCAGATACCAGTCGTTGTTATCTTCCACCAGCg > 1:94004/1‑67 (MQ=255) cAGGTGGCGATGGCGGCGTTACTTCTTGCGATCGCAGATACCAGTCGTTGTTATCTTccacca > 1:30876/1‑63 (MQ=255) aGGTGGCGATGGCGGCGTTACTTCTTGCGATCGCAGATACCAGTCGTTGTTATCTTCCACCAGCGTGTAg < 1:1014641/70‑1 (MQ=255) aGGTGGCGATGGCGGCGTTACTTCTTGCGATCGCAGATACCAGTCGTTGTTATCTTCCACCAGCGTGTAg < 1:273029/70‑1 (MQ=255) ggTGGCGATGGCGGCGTTACTTCTTGCGATCGCAGATACCAGTCGTTGTTATCTTCCACCAGCGTGTAGt > 1:1902511/1‑70 (MQ=255) ggTGGCGATGGCGGCGTTACTTCTTGCGATCGCAGATACCAGTCGTTGTTATCTTCCACCAGCGTGTAGTc < 1:2712059/71‑1 (MQ=255) gTGGCGATGGCGGCGTTACTTCTTGCGATCGCAGATACCAGTCGTTGTTATCTTCCACCAGCGTGTAGTCa < 1:1363895/71‑1 (MQ=255) ggCGATGGCGGCGTTACTTCTTGCGATCGCAGATACCAGTCGTTGTTATCTTccacca < 1:223215/58‑1 (MQ=255) ggCGATGGCGGCGTTACTTCTTGCGATCGCAGATACCAGTCGTTGTTATCTTccacca < 1:1714728/58‑1 (MQ=255) ggCGATGGCGGCGTTACTTCTTGCGATCGCAGATACCAGTCGTTGTTATCTTCCACCAGCGTGTAGTCAt < 1:1035754/70‑1 (MQ=255) gCGATGGCGGCGTTACTTCTTGCGATCGCAGATACCAGt < 1:2430225/39‑1 (MQ=255) gCGATGGCGGCGTTACTTCTTGCGATCGCAGATACCAGTCgttgt > 1:2289523/1‑45 (MQ=255) cGATGGCGGCGTTACTTCTTGCGATCGCAGATACCAGTCgttgt < 1:2213118/44‑1 (MQ=255) cGATGGCGGCGTTACTTCTTGCGATCGCAGATACCAGTCgttgt < 1:3297045/44‑1 (MQ=255) cGATGGCGGCGTTACTTCTTGCGATCGCAGATACCAGTCgttgt < 1:1163698/44‑1 (MQ=255) cGATGGCGGCGTTACTTCTTGCGATCGCAGATACCAGTCGTTGTTATCTTCCACCAGCGTGTAGTCATAc > 1:2517500/1‑70 (MQ=255) tGGCGGCGTTACTTCTTGCGATCGCAGATACCAGTCGTTGTTATCTTCCACCAGCGTGTAGTCATACGCTc > 1:3429766/1‑71 (MQ=255) gcggcgTTACTTCTTGCGATCGCAGATACCAGTCGTTGTTATCTTCCACCAGCGTGTAGTCATACGCTcc > 1:2360160/1‑70 (MQ=255) cgtatgactacacgctggtggaAGATACCAGTCGTTGTTa > 1:3181257‑M1/23‑40 (MQ=255) cgtatgactacacgctggtggaAGATACCAGTCGTTGTTa > 1:507210‑M1/23‑40 (MQ=255) tatgactacacgctggtggaAGATACCAGTCGTTGTTa > 1:353740‑M1/21‑38 (MQ=255) cgTTACTTCTTGCGATCGCAGATACCAGTCGTTGTTATCTTCCACCAGCGTGTAGTCATACGCTCCCatat > 1:2107574/1‑71 (MQ=255) ttACTTCTTGCGATCGCAGATACCAGTCGTTGTTATCTTCCACCAGCGTGTAGTCATACGCTCCCATAtt > 1:2953069/1‑70 (MQ=255) aCTTCTTGCGATCGCAGATACCAGTCGTTGTTATCTTCCACCAGCGTGTAGTCATACGCTCCCata > 1:447848/1‑66 (MQ=255) aCTTCTTGCGATCGCAGATACCAGTCGTTGTTATCTTCCACCAGCGTGTAGTCATACGCTCCCATATTGAc > 1:399668/1‑71 (MQ=255) ttcttGCGATCGCAGATACCAGTCGTTGTTATCTTCCCCCAg > 1:1927962/1‑42 (MQ=255) cttGCGATCGCAGATACCAGTCGTTGTTATCTTCCACCAGCGTGTAGTCATACGCTCCCATATTGACGTAg > 1:1024764/1‑71 (MQ=255) cttGCGATCGCAGATACCAGTCGTTGTTATCTTCCACCAGCGTGTAGTCATACGCTCCCATATTGACGTAg > 1:1519255/1‑71 (MQ=255) ttGCGATCGCAGATACCAGTCGTTGTTATCTTCCACCAGCGTGTAGTCATACGCTCCCATATTGACGTAGc > 1:431643/1‑71 (MQ=255) ttGCGATCGCAGATACCAGTCGTTGTTATCTTCCACCAGCGTGTAGTCATACGCTCCCATATTGACGTAGc > 1:435971/1‑71 (MQ=255) gCGATCGCAGATACCAGTCGTTGTTATCTTCCACCAGCGTGTAGTCATACGCTCCCATATTGACGTAGCCg > 1:3386424/1‑71 (MQ=255) gCGATCGCAGATACCAGTCGTTGTTATCTTCCACCAGCGTGTAGTCATACGCTCCCATATTGACGTAGCCg > 1:846182/1‑71 (MQ=255) gATCGCAGATACCAGTCGTTGTTATCTTCCACCAGCGTGTAGTCATACGCTCCCATATTGACGTAGCCGct > 1:3179869/1‑71 (MQ=255) aTCGCAGATACCAGTCGTTGTTATCTTCCACCAGCGTGTAGTCATACGCTCCCATATTGACGTa < 1:730380/64‑1 (MQ=255) aTCGCAGATACCAGTCGTTCTTATCTTCCACCAGCGTGTAGTCATACGCTCCCATATTGACGTa < 1:1905355/64‑1 (MQ=255) tCGCAGATACCAGTCGTTGTTATCTTCCACCAGCGTGTAGTCATACGCTCCCATATTGACGTAGCCGctgc > 1:2874203/1‑71 (MQ=255) tCGCAGATACCAGTCGTTGTTATCTTCCACCAGCGTGTAGTCATACGCTCCCATATTGACGTAGCCGctgc > 1:1501106/1‑71 (MQ=255) gCAGATACCAGTCGTTGTTATCTTCCACCAGCGTGTAGTCATa > 1:3218181/1‑43 (MQ=255) cAGATACCAGTCGTTGTTATCTTCCACCAGCGTGTAGTCATACGCTCCCATATTGACGTAGcc < 1:245627/63‑1 (MQ=255) cAGATACCAGTCGTTGTTATCTTCCACCAGCGTGTAGTCATACGCTCCCATATTGACGTAGCCGctgcctg > 1:1360154/1‑71 (MQ=255) AGATACGAGTCGTTGTTATCTTCCACCAGCGTGTAGTCATACGCTCCCATATTGACGTAGCCGctgcctgc < 1:477931‑M1/71‑1 (MQ=255) AGATACCAGTCGTTGTTATCTTCCACCAGCGTGTAGTCATACGCTCCCATATTGACGTAGCCGc > 1:3220049‑M1/1‑64 (MQ=255) AGATACCAGTCGTTGTTATCTTCCACCAGCGTGTAGTCATACGCTCCCATATTGACGTAGCCGc > 1:1322702‑M1/1‑64 (MQ=255) | GGCGTGGGATCAGGATCGGGAGTCGGGTCTGGATCAGGTGGCGATGGCGGCGTTACTTCTTGCGATCGCAGATACCAGTCGTTGTTATCTTCCACCAGCGTGTAGTCATACGCTCCCATATTGACGTAGCCGCTGCCTGC > minE/1468915‑1469054 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |