| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | 1586261 = | 44 (0.750) | 4 (0.080) | 3/92 | NT | 11.0% | coding (795/972 nt) | cysK | cysteine synthase A, O‑acetylserine sulfhydrolase A subunit |
| ? | minE | 1586289 = | 25 (0.470) | coding (823/972 nt) | cysK | cysteine synthase A, O‑acetylserine sulfhydrolase A subunit | |||||
TGGTCGATAAAGTCATTGGCATCACCAATGAAGAAGCGATTTCTACCGCGCGTCGTCTGATGGAAGAAGAAGGTATTCTTGCAGGTATCTCTTCTGGAGCAGCTGTTGCCGCGGCGTTGAAACTACAAGAAGATGA > minE/1586194‑1586329 | ccacaatattcttgttggtaaagctttcatcttcttgtagtttcaacgccgcggcaacagctgctccAGaa > 1:3080644‑M1/68‑71 (MQ=255)ccacaatattcttgttggtaaagctttcatcttcttgtagtttcaacgccgcggcaacagctgctccAGaa > 1:2728656‑M1/68‑71 (MQ=255) gTCGATAAAGTCATTGGCATCACCAATGAAGAAGCGATTTCTACCGCGCGTCGTCTGATGGAAGAAGAAgg > 1:1365482/1‑71 (MQ=255) cGATAAAGTCATTGGCATCACCAATGAAGAAGCGATTTCTACCGCGCGTCGTCTGATGGAAGAAGAAGGTa > 1:1383094/1‑71 (MQ=255) aatattcttgttggtaaagctttcatcttcttgtagtttcaacgccgcggcaacagctgctccAGaa < 1:2215205‑M1/4‑1 (MQ=255) gATAAAGTCATTGGCATCACCAATGAAGAATCGATTTCTACCGCGCGTCGTCTGATGgaagaaga < 1:3379263/65‑1 (MQ=255) tAAAGTCATTGGCATCACCAATGAAGAAGCGATTTCTACCGCGCGTCGTCTGATGGaagaagaag > 1:1569420/1‑65 (MQ=255) tAAAGTCATTGGCATCACCAATGAAGAAGCGATTTCTACCGCGCGTCGTCTGATGGaagaagaag > 1:2373811/1‑65 (MQ=255) aaGTCATTGGCATCACCAATGAAGAAGCGATTTCTACCGCGCGTCGTCTGATGGAAGAAGAAGGTATTCtt < 1:3164702/71‑1 (MQ=255) aaGTCATTGGCATCACCAATGAAGAAGCGATTTCTACCGCGCGTCGTCTGATGGAAGAAGAAGGTATTCt < 1:3095639/70‑1 (MQ=255) aaGTCATTGGCATCACCAATGAAGAAGCGATTTCTACCGCGCGTCGTCTGATGGAAGAAGAAGGTATTCt < 1:1792957/70‑1 (MQ=255) aTTGGCATCACCAATGAAGAAGCGATTTCTACCGCGCGTCGTCTGATGgaagaag < 1:2885653/55‑1 (MQ=255) aTTGGCATCACCAATGAAGAAGCGATTTCTACCGCGCGTCGTCTGATGgaagaag < 1:2325989/55‑1 (MQ=255) aTTGGCATCACCAATGAAGAAGCGATTTCTACCGCGCGTCGTCTGATGGAAGAAGAAGGTATTCTTGCAgg > 1:2148697/1‑71 (MQ=255) ttGGCATCACCAATGAAGAAGCGATTTCTACCGCGCGTCGTCTGATGGAAGAAGAAGGTATTCTTGCAg > 1:947133/1‑69 (MQ=255) ttGGCATCACCAATGAAGAAGCGATTTCTACCGCGCGTCGTCTGATGGAAGAAGAAGGTATTCTTGCAg > 1:3515692/1‑69 (MQ=255) tGGCATCACCAATGAAGAAGCGATTTCTACCGCGCGTCGTCTGATGGAAGAAGAAGGTa > 1:2315433/1‑59 (MQ=255) tGGCATCACCAATGAAGAAGCGATTTCTACCGCGCGTCGTCTGATGGAAGAAGAAGGTATTCTTGCAGGTa > 1:2264252/1‑71 (MQ=255) tGGCATCACCAATGAAGAAGCGATTTCTACCGCGCGTCGTCTGATGGAAGAAGAAGGTATTCTTGCAGGTa > 1:507516/1‑71 (MQ=255) gtaaagctttcatcttcttgtagtttcaacgccgcggcaacagctgctccAGaa > 1:1977309‑M1/51‑54 (MQ=255) ggCATCACCAATGAAGAAGCGATTTCTACCGCGCGTCGTCTGATGGAAGAAGAAGGTATTCTTGCAgg > 1:562697/1‑68 (MQ=255) ggCATCACCAATGAAGAAGCGATTTCTACCGCGCGTCGTCTGATGGAAGAAGAAGGTATTCTTGCAgg > 1:3189738/1‑68 (MQ=255) tCACCAATGAAGAAGCGATTTCTACCGCGCGTCGTCTGATGGAAGAAGAAGGTATTCTTGCAGGTATctct > 1:1533679/1‑71 (MQ=255) aCCAATGAAGAAGCGATTTCTACCGCGCGTCGTCTGATGGAAGAAGAAGGTATTCTTGCAGGTATCtcttc > 1:3497339/1‑71 (MQ=255) aCCAATGAAGAAGCGATTTCTACCGCGCGTCGTCTGATGGAAGAAGAAGGTATTCTTGCAGGTATCtcttc < 1:1728315/71‑1 (MQ=255) ccAATGAAGAAGCGATTTCTACCGCGCGTCGTCTGATGGAAGAAGAAGGTATTCTTGCAGGTATCtcttct < 1:3075009/71‑1 (MQ=255) ccAATGAAGAAGCGATTTCTACCGCGCGTCGTCTGATGGAAGAAGAAGGTATTCTTGCAGGTATCtcttct < 1:2793157/71‑1 (MQ=255) ccAATGAAGAAGCGATTTCTACCGCGCGTCGTCTGATGGAAGAAGAAGGTATTCTTGCAGGTATCtcttc < 1:3172860/70‑1 (MQ=255) aaTGAAGAAGCGATTTCTACCGCGCGTCGTCTGATGGAAGAAGAAGGTATTCTTGCAGGTATCTCTTCTgg < 1:1640391/71‑1 (MQ=255) aaTGAAGAAGCGATTTCTACCGCGCGTCGTCTGATGGAAGAAGAAGGTATTCTTGCAGGTATCTCTTCTgg < 1:3378501/71‑1 (MQ=255) catcttcttgtagtttcaacgccgcggcaacagctgctccAGAAGGTATTCTTGCAGGTATCtcttc > 1:3036220‑M1/41‑67 (MQ=255) aTGAAGAAGCGATTTCTACCGCGCGTCGTCTGATGGAAGAAGAAGGTATTCTTGCAGGTATCTCTTCTg > 1:716215/1‑69 (MQ=255) aTGAAGAAGCGATTTCTACCGCGCGTCGTCTGATGGAAGAAGAAGGTATTCTTGCAGGTATCTCTTCTg > 1:945975/1‑69 (MQ=255) agaagCGATTTCTACCGCGCGTCGTCTGATGGAAGAAGAAGGTATTCTTGCAGGTATCTCTTCTGGagcag > 1:511080/1‑71 (MQ=255) gaagCGATTTCTACCGCGCGTCGTCTGATGGAAGAAGAAGGTATTCTTGCAGGTATCTCTTCTGGagcagc > 1:2648049/1‑71 (MQ=255) cGATTTCTACCGCGCGTCGTCTGATGGAAGAAGAAGGTATTCTTGCAGGTATCTCTTCTGGAGCAGCTGtt < 1:2834225/71‑1 (MQ=255) agtttcaacgccgcggcaacagctgctccAGAAGGTATTCTTGCAGGTATCtcttc < 1:2917876‑M1/27‑1 (MQ=255) aTTTCTACCGCGCGTCGTCTGATGGAAGAAGAAGGTATTCTTGCAGGTATCtcttct < 1:422098/57‑1 (MQ=255) ttCTACCGCGCGTCGTCTGATGGAAGAAGAAGGTATTCTTGCAGGTATCTCTTCTgg > 1:2717783/1‑57 (MQ=255) tCTACCGCGCGTCGTCTGATGGAAGAAGAAGGTATTCTTGCAGGTATCTCTTCTGGAGCAGCTGTTGCcgc > 1:2943939/1‑71 (MQ=255) aCCGCGGGTCGTCTGATGGACGAAGAAGGTAGTCTTg < 1:2978025/37‑1 (MQ=25) ccgcggcaacagctgctccAGAAGGTATTCTTGCAGGTATctct > 1:1756386‑M1/20‑44 (MQ=255) ccgcggcaacagctgctccAGAAGGTATTCTTGCAGGTATctct > 1:1924735‑M1/20‑44 (MQ=255) gcgTCGTCTGATGGAAGAAGAAGGTATTCTTGCAGGTATCTCTTCTGGAGCAGCTGTTGCCGCGGCGTTGa < 1:1284350/71‑1 (MQ=255) gtcTGATGGAAGAAGAAGGTATTCTTGCAGGTATCTCTTCTGGAGCAGCTGTTGCCGCGGCGTTGcaa > 1:316708/1‑68 (MQ=255) gtcTGATGGAAGAAGAAGGTATTCTTGCAGGTATCTCTTCTGGAGCAGCTGTTGCCGCGGCGTTGaaa > 1:3233757/1‑68 (MQ=255) gtcTGATGGAAGAAGAAGGTATTCTTGCAGGTATCTCTTCTGGAGCAGCTGTTGCCGCGGCGTTGaaa > 1:2666406/1‑68 (MQ=255) gtcTGATGGAAGAAGAAGGTATTCTTGCAGGTATCTCTTCTGGAGCAGCTGTTGCCGCGGCGTTGAAACTa > 1:1935620/1‑71 (MQ=255) tcTGATGGAAGAAGAAGGTATTCTTGCAGGTATCTCTTCTGGAGCAGCTGTTGCCGCGGCGTTGAAACTAc < 1:1505140/71‑1 (MQ=255) tGATGGAAGAAGAAGGTATTCTTGCAGGTATCTCTTCTGGAGCAGCTGt > 1:119801/1‑49 (MQ=255) tGATGGAAGAAGAAGGTATTCTTGCAGGTATCTCTTCTGGAGCAGCTGt > 1:2214125/1‑49 (MQ=255) tGATGGAAGAAGAAGGTATTCTTGCAGGTATCTCTTCTGGAGCAGCTGTTGCCGCGGCGTTGAAACTAc > 1:3629136/1‑69 (MQ=255) gATGTAATAAGAAGGTATTCTTGCAGGTATCTCTTCTgg < 1:2703146/39‑1 (MQ=38) gATGGAAGAAGAAGGTATTCTTGCAGGTATCTCTTCTGGAGCAGCTGTTGCCGCGGCGTTGAAACTAc > 1:967710/1‑68 (MQ=255) aTGGAAGAAGAAGGTATTCTTGCAGGTATCTCTTCTGGAGCAGCt < 1:1793869/45‑1 (MQ=255) aTGGAAGAAGAAGGTATTCTTGCAGGTATCTCTTCTGGAGCAGCTGTTGCCGCGGCGTTGAAACTACa < 1:1397660/68‑1 (MQ=255) tGGAAGAAGAAGGTATTCTTGCAGGTATCTCTTCTg < 1:2487044/36‑1 (MQ=255) aagaagaagGTATTCTTGCAGGTATCTCTTCTGGAGCAGCTGTTGCCGCGGCGTTGAAACTACAAGAAGAt < 1:2251060/71‑1 (MQ=255) aagaagaagGTATTCTTGCAGGTATCTCTTCTGGAGCAGCTGTTGCCGCGGCGTTGAAACTACAAGAAGAt < 1:3119367/71‑1 (MQ=255) gaagaagGTATTCTTGCAGGTATCTCTTCTGGAGCAGCTGTTGCCGCGGCGt > 1:2087645/1‑52 (MQ=255) gaagaagGTATTCTTGCAGGTATCTCTTCTGGAGCAGCTGTTGCCGCGGCGt > 1:661805/1‑52 (MQ=255) gaagaagGTATTCTTGCAGGTATCTCTTCTGGAGCAGCTGTTGCCGCGGCGTTGAAACTACAAGAAGATGa < 1:2179409/71‑1 (MQ=255) AGAAGGTATTCTTGCAGGTATCTCTTCTGGAGCAGCTGTTGCcg > 1:909959‑M1/1‑44 (MQ=255) AGAAGGTATTCTTGCAGGTATCTCTTCTGGAGCAGCTGTTGCcg > 1:2847981‑M1/1‑44 (MQ=255) | TGGTCGATAAAGTCATTGGCATCACCAATGAAGAAGCGATTTCTACCGCGCGTCGTCTGATGGAAGAAGAAGGTATTCTTGCAGGTATCTCTTCTGGAGCAGCTGTTGCCGCGGCGTTGAAACTACAAGAAGATGA > minE/1586194‑1586329 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |