| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | 1607174 = | 23 (0.390) | 4 (0.070) | 3/94 | NT | 16.3% | coding (892/900 nt) | hemF | coproporphyrinogen III oxidase |
| ? | minE | 1607197 = | 20 (0.370) | coding (1044/1053 nt) | yfeG | predicted DNA‑binding transcriptional regulator | |||||
GAATATGATTATCAGCCAAAAGATGGCAGCCCAGAAGCGGCGTTAAGTGAGTTTATTAAGGTCAGGGATTGGGTGTAACTCCCTCACCCCCACTCCCGCATCCGCTGATGCAGCGTCAGTGACGGCTTCTCGGAAAAC > minE/1607105‑1607242 | gAATATGATTATCAGCCAAAAGATGGCAGCCCAGAAGCGGCGTTAAGTGAGTTTATTAAGGTCAGGGATTg < 1:3707798/71‑1 (MQ=255) ttgccacggattaccagcagctgttttccgagaagccgtcactgacgctgcatcagcggatgcgggagTgg < 1:857315‑M1/3‑1 (MQ=255) aaTATGATTATCAGCCAAAAGATGGCAGCCCAGAAGCGGCGTTAAGTGAGTTTATTAAGGTCAGGGATTgg > 1:996575/1‑71 (MQ=255) aaTATGATTATCAGCCAAAAGATGGCAGCCCAGAAGCGGCGTTAAGTGAGTTTATTAAGGTCAGGGATTgg < 1:27099/71‑1 (MQ=255) tgccacggattaccagcagctgttttccgagaagccgtcactgacgctgcatcagcggatgcgggagTggg < 1:2459882‑M1/4‑1 (MQ=255) aTTATCAGCCAAAAGATGGCAGCCCAGAAGCGGCGTTAAGTGAGTTTATTAAGGTCAGGGATTGGGTGTaa > 1:3554551/1‑71 (MQ=255) ttATCAGCCAAAAGATGGCAGCCCAGAAGCGGCGTTAAGTGAGTTTATTAAGGTCAGGGATTGGGTGTAAc > 1:1189614/1‑71 (MQ=255) ttATCAGCCAAAAGATGGCAGCCCAGAAGCGGCGTTAAGTGAGTTTATTAAGGTCAGGGATTGGGTGTAAc < 1:2793964/71‑1 (MQ=255) ttATCAGCCAAAAGATGGCAGCCCAGAAGCGGCGTTAAGTGAGTTTATTAAGGTCAGGGATTGGGTGTAAc > 1:2524498/1‑71 (MQ=255) ttaccagcagctgttttccgagaagccgtcactgacgctgcatcagcggatgcgggagt > 1:2432957‑M1/59‑59 (MQ=255) ttaccagcagctgttttccgagaagccgtcactgacgctgcatcagcggatgcgggagt > 1:3554060‑M1/59‑59 (MQ=255) cAGCCAAAAGATGGCAGCCCAGAAGCGGCGTTAAGTGAGTTTATTAAGGTCAGGGATTGGgtg > 1:918648/1‑63 (MQ=255) aaGATGGCAGCCCAGAAGCGGCGTTAAGTGAGTTTATTAAGGTCAGGGATTGGGTGTAACTCCCTCAcccc < 1:1554023/71‑1 (MQ=255) ttttccgagaagccgtcactgacgctgcataagaggatgcgggagTGGGTGTAACTCCCTCACCCCCAc > 1:3396590‑M1/46‑69 (MQ=255) agaagccgtcactgacgctgcatcagcggatgcgggagTGGGTGTAACTCCCTCAcccc < 1:2685216‑M1/21‑1 (MQ=255) aaGCGGCGTTAAGTGAGTTTATTAAGGTCAGGGATTGGGTGTAACTCCCTCACCCCCACTCCCGCATCCGc < 1:2371593/71‑1 (MQ=255) gccgtcactgacgctgcatcagcggatgcgggagTGGGTGTAACTCCCTCAccc > 1:1857599‑M1/35‑54 (MQ=255) gccgtcactgacgctgcatcagcggatgcgggagTGGGTGTAACTCCCTCAccc > 1:2784856‑M1/35‑54 (MQ=255) aGCGGCGTTAAGTGAGTTTATTAAGGTCAGGGATTGGGTGTAACTCCCTc < 1:3320019/50‑1 (MQ=255) aGCGGCGTTAAGTGAGTTTATTAAGGTCAGGGATTGGGTGTAACTCCCTc < 1:2701214/50‑1 (MQ=255) gTTAAGTGAGTTTATTAAGGTCAGGGATTGGGTGTAACttc < 1:1664440/41‑3 (MQ=255) gTTAAGTGAGTTTATTAAGGTCAGGGATTGGGTGTAACTcc < 1:1932596/41‑1 (MQ=255) gTTAAGTGAGTTTATTAAGGTCAGGGATTGGGTGTAACTcc < 1:316836/41‑1 (MQ=255) gTTAAGTGAGTTTATTAAGGTCAGGGATTGGGTGTAACTCCCTCACCCCCACTCCCGCATCCGCTGATg > 1:2531886/1‑69 (MQ=255) gTTAAGTGAGTTTATTAAGGTCAGGGATTGGGTGTAACTCCCTCACCCCCACTCCCGCATCCGCTGATg > 1:17911/1‑69 (MQ=255) tAAGTGAGTTTATTAAGGTCAGGGATTGGGTGTAACTCCCTCACCCCCACTCCCGCATCCGCTGAt > 1:3348633/1‑66 (MQ=255) aaGTGAGTTTATTAAGGTCAGGGATTGGGTGTAACTCCCTCACCCCCACTCCCGCATCCGCTGATGCAGc < 1:3104570/70‑1 (MQ=255) aaGTGAGTTTATTAAGGTCAGGGATTGGGTGTAACTCCCTCACCCCCACTCCCGCATCCGCTGATGCAGCg > 1:1760380/1‑71 (MQ=255) aGTGAGTTTATTAAGGTCAGGGATTGGGTGTAACTCCCTCACCCCCACTCCCGCATCCGCTGATGCAGCGt < 1:2909006/71‑1 (MQ=255) taAGGTCAGGGATTGGGTGTAACTCCCTCCCCCCCACTCCCGCATCCGCTGATGCAGc > 1:384976/1‑58 (MQ=255) aGGTCAGGGATTGGGTGTAACTCCCTCACCCCCACTCCCGCATCCGCTGATGCAGCGTCAGTGACGGCTtc < 1:821605/71‑1 (MQ=255) ggTCAGGGATTGGGTGTAACTCCCTCACCCCCACTCCCGCATCCg < 1:1674505/45‑1 (MQ=255) ggTCAGGGATTGGGTGTAACTCCCTCACCCCCACTCCCGCATCCg < 1:2066344/45‑1 (MQ=255) tCAGGGATTGTGTGTAACTCCCTCACCCCCACTCCCGCATCCGCTGATGCAGCGTCAGTGACGGCtt < 1:3506358/67‑1 (MQ=255) gggATTGGGTGTAACTCCCTCACCCCCACTCCCGCATCCGCTGATGCAGCGTCAGTGACGGCTTCTCGGa > 1:3192227/1‑70 (MQ=255) aTTGGGTGTAACTCCCTCACCCCCACTCCCGCATCCGCTGATGCAGCGTCAGTGACGGCTTCTCGGAAAAc < 1:1587030/71‑1 (MQ=255) aTTGGGTGTAACTCCCTCACCCCCACTCCCGCATCCGCTGATGCAGCGTCAGTGACGGCTTCTCGGAAAAc < 1:2183370/71‑1 (MQ=255) aTTGGGTGTAACTCCCTCACCCCCACTCCCGCATCCGCTGATGCAGCGTCAGTGACGGCTTCTCGGAAAAc < 1:1369570/71‑1 (MQ=255) aTTGGGTGTAACTCCCTCACCCCCACTCCCGCATCCGCTGATGCAGCGTCAGTGACGGCTTCTCGGAAAAc < 1:1073552/71‑1 (MQ=255) | GAATATGATTATCAGCCAAAAGATGGCAGCCCAGAAGCGGCGTTAAGTGAGTTTATTAAGGTCAGGGATTGGGTGTAACTCCCTCACCCCCACTCCCGCATCCGCTGATGCAGCGTCAGTGACGGCTTCTCGGAAAAC > minE/1607105‑1607242 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |