| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | 1761899 = | 19 (0.320) | 3 (0.060) | 3/94 | NT | 14.6% | intergenic (‑29/+156) | rrlG/gltW | 23S ribosomal RNA/tRNA‑Glu |
| ? | minE | 2232352 = | NA (NA) | intergenic (‑8/+186) | rrlD/gltV | 23S ribosomal RNA/tRNA‑Glu | |||||
TGACTGCCAGGGCATCCACCGTGTACGCTTAGTCGCTTAACCTCACAACCCGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCATTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGA > minE/1761829‑1761968 | acaacgaaagttgttcgtgagtctctcaaattttcgcaacacgatgatgaatcgaaagaaacatcttcggg < 1:3257798‑M1/1‑1 (MQ=255)acaacgaaagttgttcgtgagtctctcaaattttcgcaacacgatgatgaatcgaaagaaacatcttcggg < 1:2417254‑M1/1‑1 (MQ=255) acgaaagttgttcgtgagtctctcaaattttcgcaacacgatgatgaatcgtaagaaacatcttcggGTTg > 1:3033027‑M1/68‑71 (MQ=255) cgaaagttgttcgtgagtctctcaaattttcgcaacacgatgatgaatcgtaagaaacatcttcggGt < 1:2694453‑M1/2‑1 (MQ=255) gaaagttgttcgtgagtctctcaaattttcgcaacacgatgatgaatcgaaagaaacatcttcggGTTg < 1:2745457‑M1/4‑1 (MQ=255) ttgttcgtgagtctctcaaattttcgcaacacgatgatgaatcgtaagaaacatcttcggg > 1:1696893‑M1/61‑61 (MQ=255) tAACCTCACAACCCGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCAtt > 1:2185796/1‑71 (MQ=34) acacgatgatgaatcgaaagaaacatcttcggGTTGCGAAAATTTGAGAGACTCACGAACAACTCTCGTTg < 1:1376414‑M1/39‑1 (MQ=255) aaCCTCACAACCCGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCAtt < 1:2397066/70‑1 (MQ=35) aaCCTCACAACCCGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCATTg > 1:2376888/1‑71 (MQ=34) aaCCTCACAACCCGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCATTg > 1:549889/1‑71 (MQ=34) cacgatgatgaatcgtaagaaacatcttcggGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGt < 1:3517515‑M1/40‑1 (MQ=255) aCCTCACAACCCGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCATTg < 1:3584316/70‑1 (MQ=35) aCCTCACAACCCGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCATTGt < 1:2578489/71‑1 (MQ=34) ccTCACAACCCGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCATTGtt < 1:1272129/71‑1 (MQ=34) ccTCACAACCCGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCATTGt > 1:1324290/1‑70 (MQ=35) tgatgaatcgaaagaaacatcttcgtGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCGTTGTTCAg < 1:2429915‑M1/44‑1 (MQ=255) acaACCCGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCATTGTTCa < 1:3401234/69‑1 (MQ=35) acaACCCGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCATTGTTCa < 1:1393033/69‑1 (MQ=35) acaACCCGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCATTGTTCAg > 1:3729427/1‑70 (MQ=35) caACCCGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCATTGTTCAgtg > 1:1334531/1‑71 (MQ=34) aaCCCGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCATTGTTCAgtgt < 1:2558212/71‑1 (MQ=34) cccGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCATTGTTCAGTGttt > 1:2934723/1‑71 (MQ=34) cccGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCATTGTTCAGTGtt > 1:1433993/1‑70 (MQ=35) ccGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCATTGTTCAGTGTTTc < 1:2335491/71‑1 (MQ=34) ccGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCATTGTTCAGTGTTTc < 1:2186180/71‑1 (MQ=34) cGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCATTGTTCAGTGttt > 1:1147044/1‑69 (MQ=35) cGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCATTGTTCAGTGttt > 1:1826998/1‑69 (MQ=35) tCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCATTGTTCAGTGTTTCAATTTTCAGCTTGATc > 1:1167250/1‑71 (MQ=34) cAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCATTGTTCAGTGTTTCAATTTTCAGCTTGATc > 1:124582/1‑70 (MQ=35) ggGTTGTGAAAATTTGAGAGACTCACGAACAACTTtcg > 1:1325885‑M1/3‑37 (MQ=255) tGTTGCTAAAATTTGAGAGACTCACGAACAACTTTCATTGTTCAGTGTTTCAAt < 1:3226146‑M1/53‑1 (MQ=255) tGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCATTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGa > 1:1343243‑M1/2‑71 (MQ=255) | TGACTGCCAGGGCATCCACCGTGTACGCTTAGTCGCTTAACCTCACAACCCGAAGATGTTTCACTTCAGAGTTGCGAAAATTTGAGAGACTCACGAACAACTTTCATTGTTCAGTGTTTCAATTTTCAGCTTGATCCAGA > minE/1761829‑1761968 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |