| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | 1958332 = | 38 (0.640) | 15 (0.290) | 4/88 | NT | 34.6% | coding (262/660 nt) | rpiA | ribosephosphate isomerase, constitutive |
| ? | minE | 1958358 = | 24 (0.470) | coding (236/660 nt) | rpiA | ribosephosphate isomerase, constitutive | |||||
TCTGCAACCGAAGCAATGATTTTTTCACGGGTCAGCGCCGCGCCGCCGCCTTTGATCATTTGCATGTGGCCGTTGATTTCATCTGCGCCATCAACGTAGATGCCAAGGCTGTCGACTTCGTTGAGATCAAAAACGTGAATG > minE/1958262‑1958402 | ccactgaaaaactgaaaagcctcggcattcacgtttttgatctcaacgaagtcgacagccttggcatctac < 1:492258‑M1/1‑1 (MQ=255)ccactgaaaaactgaaaagcctcggcattcacgtttttgatctcaacgaagtcgacagccttggcatctac < 1:847475‑M1/1‑1 (MQ=255)ccactgaaaaactgaaaagcctcggcattcacgtttttgatctcaacgaagtcgacagccttggcatctac < 1:2260025‑M1/1‑1 (MQ=255) cactgaaaaactgaaaagcctcggcattcacgtttttgatctcaacgaagtcgacagccttggcatctac > 1:3475302‑M1/70‑70 (MQ=255) cTGCAACCGAAGCAATGATTTTTTCACGGGTCAGCGCCGCGCCGCCGCCTTTGATCATTTGCATGTGGcc < 1:508216/70‑1 (MQ=255) actgaaaaactgaaaagcctcggcattcacgtttttgatctcaacgaagtcgacagccttggcatctaCGt > 1:992099‑M1/69‑71 (MQ=255) aaaaactgaaaagcctcggcattcacgtttttgatctcaacgaagtcgacagccttggcatctaCGt < 1:3586757‑M1/3‑1 (MQ=255) aaaaactgaaaagcctcggcattcacgtttttgatctcaacgaagtcgacagccttggcatctaCGt < 1:2560657‑M1/3‑1 (MQ=255) aaaaactgaaaagcctcggcattcacgtttttgatctcaacgaagtcgacagccttggcatctaCGt < 1:2364698‑M1/3‑1 (MQ=255) aaaaactgaaaagcctcggcattcacgtttttgatctcaacgaagtcgacagccttggcatctaCGTTGa > 1:2795495‑M1/65‑70 (MQ=255) aaaaactgaaaagcctcggcattcacgtttttgatctcaacgaagtcgacagccttggcatctaCGTTGAt < 1:3629158‑M1/7‑1 (MQ=255) aaaaactgaaaagcctcggcattcacgtttttgatctcaacgaagtcgacagccttggcatctaCGTTGAt < 1:204421‑M1/7‑1 (MQ=255) cGAAGCAATGATTTTTTCACGGGTCAGCGCCGCGCCGCCGCCTTTGATCATTTGCATGTGGCCGTTGAttt < 1:382634/71‑1 (MQ=255) aaGCAATGATTTTTTCACGGGTCAGCGCCGCGCCGCCGCCTTTGATCATTTGCATGTGGCCGTTGATTTCa > 1:386053/1‑71 (MQ=255) aGCAATGATTTTTTCACGGGTCAGCGCCGCGCCGCCGCCTTTGATCATTTGCATGTGGCCGTTGAttt > 1:3233031/1‑68 (MQ=255) aaaagcctcggcattcacgtttttgatctcaacgaagtcgacagccttggcatctaCGtt > 1:186164‑M1/57‑60 (MQ=255) aaaagcctcggcattcacgtttttgatctcaacgaagtcgacagccttggcatctaCGtt > 1:2553660‑M1/57‑60 (MQ=255) tGATTTTTTCACGGGTCAGCGCCGCGCCGCCGCCTTTGATCATTTGCATGTGGCCGTTGATTTCATCTgcg > 1:3025625/1‑71 (MQ=255) gATTTTTTCACGGGTCAGCGCCGCGCCGCCGCCTTTGATCATTTGCATGTGGCCGTTGAttt > 1:925811/1‑62 (MQ=255) ttttCACGGGTCAGCGCCGCGCCGCCGCCTTTGATCATTTGCATGTGGCCGTTGATTTCATCTgcg > 1:251441/1‑66 (MQ=255) tttCACGGGTCAGCGCCGCGCCGCCGCCTTTGATCATTTGCATGTGGCCGTTGATTTCATCTGCGCCATc > 1:2406570/1‑70 (MQ=255) tttCACGGGTCAGCGCCGCGCCGCCGCCTTTGATCATTTGCATGTGGCCGTTGATTTCATCTGCGCCATc < 1:1315036/70‑1 (MQ=255) ttCACGGGTCAGCGCCGCGCCGCCGCCTTTGATCATTTGCATGTGGCCGTTGATTTCATCTGCGCCATCa < 1:3357182/70‑1 (MQ=255) ttCACGGGTCAGCGCCGCGCCGCCGCCTTTGATCATTTGCATGTGGCCGTTGATTTCATCTGCGCCATCa < 1:517497/70‑1 (MQ=255) ttCACGGGTCAGCGCCGCGCCGCCGCCTTTGATCATTTGCATGTGGCCGTTGATTTCATCTGCGCCATCa < 1:1569809/70‑1 (MQ=255) aCGGGTCAGCGCCGCGCCGCCGCCTTTGATCATTTGCATGTGGCCGTTGATTTCATCTGCGCCATCAACGt < 1:1654358/71‑1 (MQ=255) ttcacgtttttgatctcaacgaagtcgacagccttggcatctaCGtt > 1:1620545‑M1/44‑47 (MQ=255) ttcacgtttttgatctcaacgaagtcgacagccttggcatctaCGtt > 1:224481‑M1/44‑47 (MQ=255) ttcacgtttttgatctcaacgaagtcgacagccttggcatctaCGtt > 1:49374‑M1/44‑47 (MQ=255) tcacgtttttgatctcaacgaagtcgacagccttggcatctaCGtt > 1:2987766‑M1/43‑46 (MQ=255) gggTCAGCGCCGCGCCGCCGCCTTTGATCATTTGCATGTGGCCGTTGATTTCATCTGCGcc > 1:2027829/1‑61 (MQ=255) gggTCAGCGCCGCGCCGCCGCCTTTGATCATTTGCATGTGGCCGTTGATTTCATCTGCGCCATCAACGTAg < 1:2351410/71‑1 (MQ=255) gggTCAGCGCCGCGCAGCCGCCTTTGATCATTTGCATGTGGCCGTTGATTTCATCTGCGCCATCAAc > 1:993051/1‑67 (MQ=255) ggTCAGCGCCGCGCCGCCGCCTTTGATCATTTGCATGTGGCCGTTGATTTCATCt > 1:726172/1‑55 (MQ=255) ggTCAGCGCCGCGCCGCCGCCTTTGATCATTTGCATGTGGCCGTTGATTTCATCt > 1:2330551/1‑55 (MQ=255) cAGCGCCGCGCCGCCGCCTTTGATCATTTGCATGTGGCCGTTGATTTCATCt > 1:3368716/1‑52 (MQ=255) aGCGCCGCGCCGCCGCCTTTGATCATTTGCATGTGGCCg > 1:489854/1‑39 (MQ=255) tttgatctcaacgaagtcgacagccttggcatctaCGTTGAt > 1:3599923‑M1/36‑42 (MQ=255) ccgcgccgcCGCCTTTGATCATTTGCATGTGGCCGTTGATTTCATCTGCGCCATCAACGTAGATGCCAAgg < 1:541861/71‑1 (MQ=255) cgcgccgcCGCCTTTGATCATTTGCATGTGGCCGTTGATTTCATCTGCGCCATCAACGTAGATGCCAAgg < 1:431696/70‑1 (MQ=255) tctcaacgaagtcgacagccttggcatctaCGTTGATTTCATCTGCGCCATCAACg > 1:189154‑M1/31‑56 (MQ=255) tctcaacgaagtcgacagccttggcatctaCGTTGATTTCATCTGCGCCATCAACg > 1:2363629‑M1/31‑56 (MQ=255) cgccgccgcCTTTGATCATTTGCATGTGGCCGTTGATTTCATCTGCGCCATCAACGTa < 1:1250204/58‑1 (MQ=255) caacgaagtcgacagccttggcatctaCGTTGATTTCATCTGCGCCATCAAc > 1:3241749‑M1/28‑52 (MQ=255) caacgaagtcgacagccttggcatctaCGTTGATTTCATCTGCGCCATCAAc > 1:414468‑M1/28‑52 (MQ=255) caacgaagtcgacagccttggcatctaCGTTGATTTCATCTGCGCCATCAAc > 1:3095456‑M1/28‑52 (MQ=255) caacgaagtcgacagccttggcatctaCGTTGATTTCATCTGCGCCATCAAc > 1:2947986‑M1/28‑52 (MQ=255) caacgaagtcgacagccttggcatctaCGTTGATTTCATCTGCGCCATCAAc > 1:1458389‑M1/28‑52 (MQ=255) aacgaagtcgacagccttggcatctaCGTTGATTTCATCTGCGCCATCAACg < 1:561078‑M1/26‑1 (MQ=255) aacgaagtcgacagccttggcatctaCGTTGATTTCATCTGCGCCATCAACg < 1:626020‑M1/26‑1 (MQ=255) aacgaagtcgacagccttggcatctaCGTTGATTTCATCTGCGCCATCAACg < 1:3169761‑M1/26‑1 (MQ=255) aacgaagtcgacagccttggcatctaCGTTGATTTCATCTGCGCCATCAACg < 1:3475829‑M1/26‑1 (MQ=255) aacgaagtcgacagccttggcatctaCGTTGATTTCATCTGCGCCATCAACg < 1:1171004‑M1/26‑1 (MQ=255) aacgaagtcgacagccttggcatctaCGTTGATTTCATCTGCGCCATCAACg < 1:2500351‑M1/26‑1 (MQ=255) ccgccTTTGATCATTTGCATGTGGCCGTTGATTTCATCTGCGCCATCAACGTAGATGCCAAGGCTGTCGAc > 1:2127704/1‑71 (MQ=255) ccgccTTTGATCATTTGCATGTGGCCGTTGATTTCATCTGCGCCATCAACGTAGATGCCAAGGCTGTCGAc < 1:2234132/71‑1 (MQ=255) cgaagtcgacagccttggcatctaCGTTGATTTCATCTgcg > 1:2585140‑M1/25‑41 (MQ=255) cgaagtcgacacccttggcatctaCGTTGATTTCATCTgcg > 1:1531529‑M1/25‑41 (MQ=255) gccTTTGATCATTTGCATGTGGCCGTTGATTTCATCTGCGCCATCAACGTAGATGCCAAGGCTGTc > 1:731797/1‑66 (MQ=255) gccTTTGATCATTTGCATGTGGCCGTTGATTTCATCTGCGCCATCAACGTAGATGCCAAGGCTGTc > 1:3273184/1‑66 (MQ=255) gccTTTGATCATTTGCATGTGGCCGTTGATTTCATCTGCGCCATCAACGTAGATGCCAAGGCTGTc > 1:1895027/1‑66 (MQ=255) ccTTTGATCATTTGCATGTGGCCGTTGATTTCATCTGCGCCATCAACg > 1:691582/1‑48 (MQ=255) tttGATCATTTGCATGTGGCCGTTGATTTCATCTGCGCCATc < 1:1224513/42‑1 (MQ=255) tttGATCATTTGCATGTGGCCGTTGATTTCATCTGCGCCATc < 1:1322853/42‑1 (MQ=255) ttGATCATTTGCATGTGGCCGTTGATTTCATCTGCGCCATCAAcct > 1:570052/1‑44 (MQ=255) ttGATCATTTGCATGTGGCCGTTGATTTCATCTGCGCCATCAACGTAGATGCCAAGGCTGTCGACTTCGtt > 1:2300256/1‑71 (MQ=255) tGATCATTTGCATGTGGCCGTTGATTTCATCTGCGCCATCAACGTAg > 1:940882/1‑47 (MQ=255) tGATCATTTGCATGTGGCCGTTGATTTCATCTGCGCCATCAACGTAg > 1:3731823/1‑47 (MQ=255) gATCATTTGCATGTGGCCGTTGATTTCATCTGCGCCATCAACGTAGATGCCAAGGCTGTCGACTTCGtt > 1:1433037/1‑69 (MQ=255) aTCATTTGCATGTGGCCGTTGATTTCATCTGCGCCATCAACGTAGATGCCAAg > 1:589794/1‑53 (MQ=255) cATTTGCATGTGGCCGTTGATTTCATCTGCGCCATCAACGTAGATGCCAAGGCTGTCGACTTCGtt > 1:2942716/1‑66 (MQ=255) tttGCATGTGGCCGTTGATTTCATCTGCGCCATCAACGTAGATGCCAAGGCTGTCGACTTCGTTGAGATCa < 1:3313753/71‑1 (MQ=255) cATGTGGCCGTTGATTTCATCTGCGCCATCAACGTAGATGCCAAGGCTGTCGACTTCGTTGAGATCaaaa < 1:3519386/70‑1 (MQ=255) ccGTTGATTTCATCTGCGCCATCAACGTAGATGCCAAGGCTGTCGACTTCGTTGAGATCAAAAACGTGAAt < 1:3606225/71‑1 (MQ=255) CGTTGATTTCATCTGCGCCATCAACGTAGATGCCAAGGCTGTCGACTTCGTTGAGATCAAAAACGTGAATg < 1:1646427‑M1/71‑1 (MQ=255) CGTTGATTTCATCTGCGCCATCAACGTAGATGCCAAGGCTGTCGACTTCGTTGAGATCAAAAACGTGAATg < 1:3736180‑M1/71‑1 (MQ=255) | TCTGCAACCGAAGCAATGATTTTTTCACGGGTCAGCGCCGCGCCGCCGCCTTTGATCATTTGCATGTGGCCGTTGATTTCATCTGCGCCATCAACGTAGATGCCAAGGCTGTCGACTTCGTTGAGATCAAAAACGTGAATG > minE/1958262‑1958402 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |