| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | = 2346582 | 53 (0.900) | 5 (0.090) | 3/96 | NT | 10.7% | intergenic (‑14/+175) | hemN/yihI | coproporphyrinogen III oxidase, SAM and NAD(P)H dependent, oxygen‑independent/conserved hypothetical protein |
| ? | minE | = 2346601 | 34 (0.610) | intergenic (‑33/+156) | hemN/yihI | coproporphyrinogen III oxidase, SAM and NAD(P)H dependent, oxygen‑independent/conserved hypothetical protein | |||||
GGAATAGTTATATTTCTGGATCAGGGCCAGATCCCAGTCGATTTGCTGTACAGACATGCTCACTCCTTCCGATGGCGTCTCTGGCGGCTACGGCGTACCGGCGGATGCCCGTTTCGGGTCATCAGCCGGTTGCGCAGCCAC > minE/2346512‑2346652 | ggAATAGTTATATTTCTGGATCAGGGCCAGATCCCAGTCGATTTGCTGTACAGACATGCTCACTCCTTCCG < 1:2564031‑M1/71‑1 (MQ=255) aTAGTTATATTTCTGGATCAGGGCCAGATCCCAGTCGATTTGCTGTACAGACATGCTCACTCCTTCCGATg > 1:2159545/1‑71 (MQ=255) gTTATATTTCTGGATCAGGGCCAGATCCCAGTCGATTTGCTGTACAGACATGCTCACTCCTTCCGATGGCg > 1:2110631/1‑71 (MQ=255) ttATATTTCTGGATCAGGGCCAGATCCCAGTCGATTTGCTGTACAGACATGCTCACTCCTTCCGATGGCGt < 1:3461180/71‑1 (MQ=255) atatTTCTGGATCAGGGCCAGATCCCAGTCGATTTGCTGTACAGACATGCTCACTCCTTCCGATGGCGtct > 1:1222439/1‑71 (MQ=255) atTTCTGGATCAGGGCCAGATCCCAGTCGATTTGCTGTACAGACATGCTCACTCCTTCCGATGGCGTctct > 1:2940802/1‑71 (MQ=255) atTTCTGGATCAGGGCCAGATCCCAGTCGATTTGCTGTACAGACATGCTCACTCCTTCCGATGGCGTctct > 1:800115/1‑71 (MQ=255) tttCTGGATCAGGGCCAGATCCCAGTCGATTTGCTGTACAGACATGCTCACTCCTTCCGATgg > 1:1812341/1‑63 (MQ=255) tttCTGGATCAGGGCCAGATCCCAGTCGATTTGCTGTACAGACATGCTCACTCCTTCCGATGGCGTCTCTg < 1:2657877/71‑1 (MQ=255) tttCTGGATCAGGGCCAGATCCCAGTCGATTTGCTGTACAGACATGCTCACTCCTTCCGATGGCGTCTCTg < 1:2972970/71‑1 (MQ=255) tCTGGATCAGGGCCAGATCCCAGTCGATTTGCTGTACAGACATGCTCACTCCTTCCGATGGCGTCTCTggc > 1:3189293/1‑71 (MQ=255) tCTGGATCAGGGCCAGATCCCAGTCGATTTGCTGTACAGACATGCTCACTCCTTCCGATGGCGTCTCTggc > 1:3193654/1‑71 (MQ=255) tGGATCAGGGCCAGATCCCAGTCGATTTGCTGTACAGACATGCTCACTCCTTCCGATGGCGTCTCTggcgg > 1:569705/1‑71 (MQ=255) tGGATCAGGGCCAGATCCCAGTCGATTTGCTGTACAGACATGCTCACTCCTTCCGATGGCGTCTCTggcgg > 1:1566537/1‑71 (MQ=255) ggATCAGGGCCAGATCCCAGTCGATTTGCTGTACAGACATGCTCACTCCTTCCGATGGCGtctc < 1:3606081/64‑1 (MQ=255) ggATCAGGGCCAGATCCCAGTCGATTTGCTGTACAGACATGCTCACTCCTTCCGATGGCGtctc < 1:165871/64‑1 (MQ=255) gATCAGGGCCAGATCCCAGTCGATTTGCTGTACAGACATGCTCACTCCTTCCGATGGCGTCTCTggcggc < 1:2339528/70‑1 (MQ=255) tCAGGGCCAGATCCCAGTCGATTTGCTGTACAGACATGCTCACTCCTTCCGATGGCGTCTCTGGCGGCTAc > 1:3290811‑M2/1‑70 (MQ=255) gCCAGATCCCAGTCGATTTGCTGTACAGACATTCTCACTCCTTCCGtagccgccagagacgccatcggaag < 1:2087740‑M1/71‑26 (MQ=255) ccAGATCCCAGTCGATTTGCTGTACAGACATGCTCACTCCTTCCGtagccgccagagacgccatcggaagg < 1:2369015‑M1/71‑27 (MQ=255) ccAGATCCCAGTCGATTTGCTGTACAGACATGCTCACTCCTTCCGtagccgccagagacgccatcggaagg < 1:2133819‑M1/71‑27 (MQ=255) ccAGATCCCAGTCGATTTGCTGTACAGACATGCTCACTCCTTCCGATGGCGTCTCTGGCGGCTACGGCGTa < 1:911380/71‑1 (MQ=255) ccAGATCCCAGTCGATTTGCTGTACAGACATGCTCACTCCTTCCGATGGCGTCTCTGGCGGCTACGGCGTa < 1:1825306/71‑1 (MQ=255) aGATCCCAGTCGATTTGCTGTACAGACATGCTCACTCCTTCCGATGGCGTCTCTggcg > 1:2304106/1‑58 (MQ=255) gATCCCAGTCGATTTGCTGTACAGACATGCTCACTCCTTCCGtagccgccagagacgccatcggaaggagt < 1:2684922‑M1/71‑30 (MQ=255) gATCCCAGTCGATTTGCTGTACAGACATGCTCACTCCTTCCGtagccgccagagacgccatcggaaggagt < 1:1368163‑M1/71‑30 (MQ=255) gATCCCAGTCGATTTGCTGTACAGACATGCTCACTCCTTCCGATGGCGTCTCTGGCGGCTACGGCGt < 1:2071726/67‑1 (MQ=255) gATCCCAGTCGATTTGCTGTACAGACATGCTCACTCCTTCCGATGGCGTCTCTGGCGGCTACGGCGt < 1:2289077/67‑1 (MQ=255) aTCCCAGTCGATTTGCTGTACAGACATGCTCACTCCTTCCGATGGCGTCTCTGGCGGCTACGGCGTACcgg < 1:2956968/71‑1 (MQ=255) ccAGTCGATTTGCTGTACAGACATGCTCACTCCTTCCGATGGCGTCTCTGGCGGCTACGGCGTACcggcgg < 1:1992273/71‑1 (MQ=255) cAGTCGATTTGCTGTACAGACATGCTCACTCCTTCCGATGGCGTCTCTGGCGGCTACGGCGTACCGGCGGa < 1:271852/71‑1 (MQ=255) aGTCGATTTGCTGTACAGACATGCTCACTCCTTCCGATGGCGTCTCTGGCGGCTACGGCGTACcggcg < 1:598100/68‑1 (MQ=255) aGTCGATTTGCTGTACAGACATGCTCACTCCTTCCGATGGCGTCTCTGGCGGCTACGGCGTACcggcg < 1:2430925/68‑1 (MQ=255) tttGCTGTACAGACATGCTCACTCCTTCCGATGGCGtct < 1:2978515/39‑1 (MQ=255) tttGCTGTACAGACATGCTCACTCCTTCCGATGGCGtct < 1:3418472/39‑1 (MQ=255) tttGCTGTACAGACATGCTCACTCCTTCCGATGGCGTctct < 1:2853868/41‑1 (MQ=255) tttGCTGTACAGACATGCTCACTCCTTCCGATGGCGTctct < 1:2883881/41‑1 (MQ=255) tGCTGTACAGACATGCTCACTCCTTCCGATGGCGTCTCTGGCGGCTACGGCGTACCGGCGGATGCCCGttt > 1:811484/1‑71 (MQ=255) cTGTACAGACATGCTCACTCCTTCCGATGGCGTCTCTGGCGGCTACGGCGTACCGGCGGATGCCAGTTTCg < 1:1607/71‑1 (MQ=255) aCAGACATGCTCACTCCTTCCGATGGCGTCTCTGGCGGCTACGGc > 1:1031534/1‑45 (MQ=255) aCAGACATGCTCACTCCTTCCGATGGCGTCTCTGGCGGCTACGGc > 1:113017/1‑45 (MQ=255) aCAGACATGCTCACTCCTTCCGATGGCGTCTCTGGCGGCTACGGc > 1:474321/1‑45 (MQ=255) cAGACATGCTCACTCCTTCCGATGGCGTCTCTGGCGGCTACGGCGTACCGGCGGATGCCCGTTTCGGGtca > 1:348211/1‑71 (MQ=255) aGACATGCTCACTCCTTCCGATGGCGTCTCTGGCGGCTACGGCGTACCGGCGGAt < 1:2742422/55‑1 (MQ=255) aGACATGCTCACTCCTTCCGATGGCGTCTCTGGCGGCTACGGCGTACCGGCGGATGCCCGTTTCGGGtcat < 1:2465571/71‑1 (MQ=255) aGACATGCTCACTCCTTCCGATGGCGTCTCTGGCGGCTACGGCGTACCGGCGGATGCCCGTTTCGGGtcat < 1:1840882/71‑1 (MQ=255) gACATGCTCACTCCTTCCGATGGCGTCTCTGGCGGCTACGGCGTACcg > 1:541839/1‑48 (MQ=255) gACATGCTCACTCCTTCCGATGGCGTCTCTGGCGGCTACGGCGTACcg > 1:147997/1‑48 (MQ=255) gACATGCTCACTCCTTCCGATGGCGTCTCTGGCGGCTACGGCGTACcg > 1:2813046/1‑48 (MQ=255) gACATGCTCACTCCTTCCGATGGCGTCTCTGGCGGCTACGGCGTACCGGCGGATGCCCGTTTCGGGtcat > 1:3047612/1‑70 (MQ=255) gACATGCTCACTCCTTCCGATGGCGGCTCTGGCGGCTAcg > 1:1354339‑M2/1‑38 (MQ=255) aCATGCTCACTCCTTCCGATGGCGTCTCTGGCGGCTACGGCGTACCGGCGGATGCCCGTTTc < 1:2568225/62‑1 (MQ=255) aCATGCTCACTCCTTCCGATGGCGTCTCTGGCGGCTACGGCGTACCGGCGGATGCCCGTTTCGGGtcat > 1:1597300/1‑69 (MQ=255) aTGCTCACTCCTTCCGATGGCGTCTCTGGCGGCTACGGCGTACCGGCGGATGCCCGTTTCGGGTCATCAGc < 1:3445470/71‑1 (MQ=255) tGCTCACTCCTTCCGATGGCGTCTCTGGCGGCTACGGCGTACCGGCGGATGCCCGTTTCGGGTCATCAGcc < 1:2295674/71‑1 (MQ=255) cACTCCTTCCGATGGCGTCTCTGGCGGCTACGGCGTACCGGCGGATGCCCGTTTCGGGTCATCAGcc < 1:1088255/67‑1 (MQ=255) cACTCCTTCCGATGGCGTCTCTGGCGGCTACGGCGTACCGGCGGATGCCCGTTTCGGGTCATCAGcc < 1:1067621/67‑1 (MQ=255) aCTCCTTCCGATGGCGTCTCTGGCGGCTAcggaaggagtgagcatgtctgtacagcaaatcgactgggatc < 1:1368163‑M2/71‑43 (MQ=255) aCTCCTTCCGATGGCGTCTCTGGCGGCTAcggaaggagtgagcatgtctgtacagcaaatcgactgggatc < 1:2684922‑M2/71‑43 (MQ=255) cTCCTTCCGATGGCGTCTCTGGCGGCTACGGCGTACCGGCGGATGCCCGTTTCGGGTCATCAGCCgg > 1:1040289/1‑67 (MQ=255) cTCCTTCCGATGGCGTCTCTGGCGGCTACGGCGTACCGGCGGATGCCCGTTTCGGGTCATCAGCCgg > 1:1170199/1‑67 (MQ=255) ccTTCCGATGGCGTCTCTGGCGGCTAcggaaggagtgagcatgtctgtacagcaaatcgactgggatctgg < 1:2369015‑M2/71‑46 (MQ=255) ccTTCCGATGGCGTCTCTGGCGGCTAcggaaggagtgagcatgtctgtacagcaaatcgactgggatctgg < 1:2133819‑M2/71‑46 (MQ=255) ccTTCCGATGGCGTCTCTGGCGGCTACGGCGTACCGGCGGATGCCCGttt > 1:3415261/1‑50 (MQ=255) ccTTCCGATGGCGTCTCTGGCGGCTACGGCGTACCGGCGGATGCCCGttt > 1:3122222/1‑50 (MQ=255) cTTCCTATGGCGTCTCTGGCGGCTACGGCGTACCGGCGGATGCCCGTTTCGGGTCATCAGCCGGTTgcg < 1:2950257/69‑1 (MQ=255) cTTCCGATGGCGTCTCTGGCGGCTAcggaaggagtgagaatgtctgtacagcaaatcgactgggatctggc < 1:2087740‑M2/71‑47 (MQ=255) cTTCCGATGGCGTCTCTGGCGGCTACGGCGTACCGGCGGATGCCCGTTTCGGGTCATCAGCCGGTTgcgc < 1:1337057/70‑1 (MQ=255) ttCCGATGGCGTCTCTGGCGGCTACGGCGTACCGGCGGATGCCCGTTTCGGGt < 1:971840/53‑1 (MQ=255) cGtagccgccagagccgccatcggaaggagtgagcatgtc > 1:1354339‑M1/1‑2 (MQ=255) cGATGGCGTCTCTGGCGGCTACGGCGTACCGGCGGATGCCCGTTTCGGGtca < 1:3001603/52‑1 (MQ=255) gtagccgccagagacgccatcggaaggagtgagcatgtctgtacagcaaatcgactgggatctggccctga > 1:3290811‑M1/1‑1 (MQ=255) | GGAATAGTTATATTTCTGGATCAGGGCCAGATCCCAGTCGATTTGCTGTACAGACATGCTCACTCCTTCCGATGGCGTCTCTGGCGGCTACGGCGTACCGGCGGATGCCCGTTTCGGGTCATCAGCCGGTTGCGCAGCCAC > minE/2346512‑2346652 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |