| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | 2518040 = | 56 (0.950) | 6 (0.110) | 3/94 | NT | 10.6% | coding (1035/2109 nt) | spoT | bifunctional (p)ppGpp synthetase II and guanosine‑3',5'‑bis pyrophosphate 3'‑pyrophosphohydrolase |
| ? | minE | 2518070 = | 50 (0.920) | coding (1005/2109 nt) | spoT | bifunctional (p)ppGpp synthetase II and guanosine‑3',5'‑bis pyrophosphate 3'‑pyrophosphohydrolase | |||||
CTCTGTTGCAGCTCCAGCAGGCTTTGCATCCAGCGCTGGGCGCGGATTTGTGCGGTAGTACTGGTTTCGCCGTGCTCTTTATAAGCCCAGTGCGCGGCAACACCCATCTCCGCCATCTGGTCCATATCTTCGGTAC > minE/2517972‑2518107 | ctctGTTGCAGCTCCAGCAGGCTTTGCATCCAGCGCTGGTCGCGGATTTGTGCGGTAGTACTGGTTTCGcc < 1:3558769/71‑1 (MQ=255) gcacggtgtgccggttgaggtccagatccgtaccgaagatatggaccagatggcggagatgggtgttGCCg < 1:2844058‑M1/4‑1 (MQ=255) gcacggtgtgccggttgaggtccagatccgtaccgaagatatggaccagatggcggagatgggtgttGCCg > 1:655221‑M1/68‑71 (MQ=255) tGCAGCTCCAGCAGGCTTTGCATCCAGCGCTGGGCGCGGATTTGTGCGGTAGTACTGGTTTCGCCGTGctc > 1:1435939/1‑71 (MQ=255) gCAGCTCCAGCAGGCTTTGCATCCAGCGCTGGGCGCGGATTTGTGCGGTAGTACTGGTTTCGc < 1:3156548/63‑1 (MQ=255) cAGCTCCTGCAGGCTTTGCATCCAGCGCTGGGCGCGGATTTGTGCGGTAGTACTGGTTTCGCCGTGCTCtt < 1:235923/71‑1 (MQ=255) cAGCTCCAGCAGGCTTTGCATCCAGCGCTGGGCGCGGATTTGTGCGGTAGTACTGGTTTCGCCGTGctct < 1:18656/70‑1 (MQ=255) aGCTCCAGCAGGCTTTGCATCCAGCGCTGGGCGCGGATTTGTGCGGTAGTACTGGTTTCGCCGTGCTCtt > 1:3719587/1‑70 (MQ=255) aGCTCCAGCAGGCTTTGCATCCAGCGCTGGGCGCGGATTTGTGCGGTAGTACTGGTTTCGCCGTGCTCtt > 1:774716/1‑70 (MQ=255) gCTCCAGCAGGCTTTGCATCCAGCGCTGGGCGCGGATTTGTGCGGTAGTACTGGTTTCGCCGTGCTCTTta > 1:3604370/1‑71 (MQ=255) ccAGCAGGCTTTGCATCCAGCGCTGGGCGCGGATTTGTGCGGTAGTACTGGTTTCGcc < 1:3090458/58‑1 (MQ=255) cagcagGCTTTGCATCCAGCGCTGGGCGCGGATTTGTGCGGTAGTACTGGTTTCGCCGTGctc > 1:932173/1‑63 (MQ=255) cagcagGCTTTGCATCCAGCGCTGGGCGCGGATTTGTGCGGTAGTACTGGTTTCGCCGTGCTCTTtata < 1:417052/69‑1 (MQ=255) cagcagGCTTTGCATCCAGCGCTGGGCGCGGATTTGTGCGGTAGTACTGGTTTCGCCGTGCTCTTtata < 1:1704068/69‑1 (MQ=255) gcagGCTTTGCATCCAGCGCTGGGCGCGGATTTGTGCGGTAGTACTGGTTTCGCCGTGCTCTTTATAAGcc > 1:3539981/1‑71 (MQ=255) gcagGCTTTGCATCCAGCGCTGGGCGCGGATTTGTGCGGTAGTACTGGTTTCGCCGTGCTCTTTATAAGcc > 1:1083836/1‑71 (MQ=255) cTTTGCATCCAGCGCTGGGCGCGGATTTGTGCGGTAGTACTGGTTTCGCCGTGCTCTTTATAAGCCCAGTg < 1:1795592/71‑1 (MQ=255) tttGCATCCAGCGCTGGGCGCGGATTTGTGCGGTAGTACTGGTTTCGCCGTGCTCTTTATAAGCCCAg > 1:2893212/1‑68 (MQ=255) tttGCATCCAGCGCTGGGCGCGGATTTGTGCGGTAGTACTGGTTTCGCCGTGCTCTTTATAAGCCCAGTgc > 1:333229/1‑71 (MQ=255) ttGCATCCAGCGCTGGGCGCGGATTTGTGCGGTAGTACTGGTTTCGCCGTGCTCtt < 1:1573657/56‑1 (MQ=255) ttGCATCCAGCGCTGGGCGCGGATTTGTGCGGTAGTACTGGTTTCGCCGTGCTCtt < 1:444563/56‑1 (MQ=255) ttGCATCCAGCGCTGGGCGCGGATTTGTGCGGTAGTACTGGTTTCGCCGTGCTCtt < 1:2104254/56‑1 (MQ=255) ttGCATCCAGCGCTGGGCGCGGATTTGTGCGGTAGTACTGGTTTCGCCGTGCTCtt < 1:2566568/56‑1 (MQ=255) tGCATCCAGCGCTGGGCGCGGATTTGTGCGGTAGTACTGGTTTCGCCGTGCTCttt > 1:43230/1‑56 (MQ=255) gCATCCAGCGCTGGGCGCGGATTTGTGCGGTAGTACTGGTTTCGCCGTg < 1:1815036/49‑1 (MQ=255) gCATCCAGCGCTGGGCGCGGATTTGTGCGGTAGTACTGGTTTCGCCGTg < 1:810164/49‑1 (MQ=255) cATCCAGCGCTGGGCGCGGATTTGTGCGGTAGTACTGGTTTCGCCGTGCTCTTTATAAGCCCAGTGCGCgg < 1:2373851/71‑1 (MQ=255) atccgtaccgaagatatggaccagatggcggagatgggtgttGCCGTGCTCTTTATAAGCCCAGTGCGCgg > 1:2441865‑M1/43‑71 (MQ=255) aTCCAGCGCTGGGCGCGGATTTGTGCGGTAGTACTGGTTTCGCCGTGct < 1:452069/49‑1 (MQ=255) aTCCAGCGCTGGGCGCGGATTTGTGCGGTAGTACTGGTTTCGCCGTGct < 1:2183142/49‑1 (MQ=255) aTCCAGCGCTGGGCGCGGATTTGTGCGGTAGTACTGGTTTCGCCGTGCTCTTTATAAGCCCAGTGCGCGGc < 1:2647731/71‑1 (MQ=255) tCCAGCGCTGGGCGCGGATTTGTGCGGTAGTACTGGTTTCGCCGTGCTCTTTATAAGCCCAGTgc < 1:901870/65‑1 (MQ=255) cAGCGCTGGGCGCGGATTTGTGCGGTAGTACTGGTTTCGCCGTGCTCTTTATAAGCCCAGTGCGCgg > 1:769402/1‑67 (MQ=255) cAGCGCTGGGCGCGGATTTGTGCGGTAGTACTGGTTTCGCCGTGCTCTTTATAAGCCCAGTGCGCGGCaa > 1:348546/1‑70 (MQ=255) gcgcTGGGCGCGGATTTGTGCGGTAGTACTGGTTTCGCCGTGCTCTTTATAAGCCCAGTGCGCGGCAacac < 1:2424380/71‑1 (MQ=255) gcTGGGCGCGGATTTGTGCGGTAGTACTGGTTTCGCCGTGCTCTTTATAAGCCCAGTGCGCGGCAACAcc > 1:2526287/1‑70 (MQ=255) gaagatatggaccagatggcggagatgggtgttGCCGTGCTCTTTATAAGCCCAGTgcg > 1:2098841‑M1/34‑59 (MQ=255) cTGGGCGCGGATTTGTGCGGTAGTACTGGTTTCGCCGTGCTCTTTATAAGCCCAGTGCGCGGCAACACCCa > 1:2988950/1‑71 (MQ=255) tGGGCGCGGATTTGTGCGGTAGTACTGGTTTCGCCGTGct < 1:39309/40‑1 (MQ=255) gggCGCGGATTTGTGCGGTAGTACTGGTTTCGCCGTGCTCTTTATAAGCCCAGTGCGCGGCAACACCCAtc > 1:3321723/1‑71 (MQ=255) ggCGCGGATTTGTGCGGTAGTACTGGTTTCGCCGTGCTCTTTATAAGCCCAGTGCGCGGCAACACCCAtct > 1:257254/1‑71 (MQ=255) cgGATTTGTGCGGTAGTACTGGTTTCGCCGTGCTCTTTATAAGCCCAGTg < 1:2781071/50‑1 (MQ=255) ggATTTGCGCGGTAGTACTGGTTTCGCCGTGCTCTTTATAAGCCCAGTGCGCGGCAACACCCATCTCCGcc < 1:1924906/71‑1 (MQ=255) gATTTGTGCGGTAGTACTGGTTTCGCCGTGCTCTTTATAAGCCCAGTGCGCGGCAACACCCATCTCCGCCa > 1:380543/1‑71 (MQ=255) gATTTGTGCGGTAGTACTGGTTTCGCCGTGCTCTTTATAAGCCCAGTGCGCGGCAACACCCATCTCCGCCa > 1:3259616/1‑71 (MQ=255) gtttGTGCGGTAGTACTGGTTTCGCCGTGCTCTTta > 1:2586251/2‑36 (MQ=255) aTTTGTGCGGTAGTACTGGTTTCGCCGTGCTCTTta > 1:2892882/1‑36 (MQ=255) aTTTGTGCGGTAGTACTGGTTTCGCCGTGCTCTTta > 1:1053827/1‑36 (MQ=255) aTTTGTGCGGTAGTACTGGTTTCGCCGTGCTCTTta > 1:1162205/1‑36 (MQ=255) aTTTGTGCGGTAGTACTGGTTTCGCCGTGCTCTTTATAAGCCCAGTGCGCGGCAACACCCATCTCCGCCAt < 1:3282048/71‑1 (MQ=255) aTTTGTGCGGTAGTACTGGTTTCGCCGTGCTCTTTATAAGCCCAGTGCGCGGCAACACCCATCTCCGCCAt > 1:1114845/1‑71 (MQ=255) tttGTGCGGTAGTACTGGTTTCGCCGTGCTCTTTATAAGCCCAGTGCGCGGCAACACCCATCTCCGCCATc > 1:3203002/1‑71 (MQ=255) ttGTGCGGTAGTACTGGTTTCGCCGTGCTCTTTATAAGCCCAGTGCGCGGCAACACCCATCTCCGCCATCt > 1:310033/1‑71 (MQ=255) tgCGGTAGTACTGGTTTCGCCGTGCTCTTTATAAGCCCAGTGCGCGGCAACACCCAtct < 1:3364639/59‑1 (MQ=255) tgCGGTAGTACTGGTTTCGCCGTGCTCTTTATAAGCCCAGTGCGCGGCAACACCCAtct < 1:591852/59‑1 (MQ=255) tgCGGTAGTACTGGTTTCGCCGTGCTCTTTATAAGCCCAGTGCGCGGCAACACCCATCTCCGCCAt < 1:874897/66‑1 (MQ=255) tgCGGTAGTACTGGTTTCGCCGTGCTCTTTATAAGCCCAGTGCGCGGCAACACCCATCTCCGCCATCTGGt > 1:336789/1‑71 (MQ=255) cGGTAGTACTGGTTTCGCCGTGCTCTTTATAAGCCCAGTGCGCGGCAACACCCATCTCCGCCATCTGGTcc < 1:1204670/71‑1 (MQ=255) cGGTAGTACTGGTTTCGCCGTGCTCTTTATAAGCCCAGTGCGCGGCAACACCCATCTCCGCCATCTGGTcc < 1:429640/71‑1 (MQ=255) gcggagatgggtgttGCCGTGCTCTTTATAAGCCCAGt > 1:1657188‑M1/16‑38 (MQ=255) gcggagatgggtgttGCCGTGCTCTTTATAAGCCCAGt > 1:1130336‑M1/16‑38 (MQ=255) gcggagatgggtgttGCCGTGCTCTTTATAAGCCCAGt > 1:1404647‑M1/16‑38 (MQ=255) gcggagatgggtgttGCCGTGCTCTTTATAAGCCCAGt > 1:2857485‑M1/16‑38 (MQ=255) gtaCTGGTTTCGCCGTGCTCTTTATAAGCCCAGTGCGCGGCaa > 1:1012494/1‑43 (MQ=255) taCTGGTTTCGCCGTGCTCTTTATAAGCCCAGTGCGCGGCAACACCCATCTCCGCCATCTGGTCCATATCt < 1:1396441/71‑1 (MQ=255) cTGGTTTCGCCGTGCTCTTTATAAGCCCAGTGCGCGGCAACACCCATCTCCGCCATCTGGTCCATATCtt < 1:1536212/70‑1 (MQ=255) tGGTTTCGCCGTGCTCTTTATAAGCCCAGTGCGCGGCAACACCCATCTCCGCCAt > 1:2868456/1‑55 (MQ=255) tttCGCCGTGCTCTTTATAAGCCCAGTGCGCGGCAACACCCATCTCCGCCATCTGGTCCATATc < 1:2792251/64‑1 (MQ=255) tttCGCCGTGCTCTTTATAAGCCCAGTGCGCGGCAACACCCATCTCCGCCATCTGGTCCATATc < 1:1109796/64‑1 (MQ=255) ttCGCCGTGCTCTTTATAAGCCCAGTGCGCGGCAACACCCATCTCCGCCATCTGGTCCATATCTTCGGTa > 1:3567196/1‑70 (MQ=255) ttCGCCGTGCTCTTTATAAGCCCAGTGCGCGGCAACACCCATCTCCGCCATCTGGTCCATATCTTCGGTAc > 1:3321955/1‑71 (MQ=255) ttCGCCGTGCTCTTTATAAGCCCAGTGCGCGGCAACACCCATCTCCGCCATCTGGTCCATATCTTCGGTAc > 1:3305252/1‑71 (MQ=255) | CTCTGTTGCAGCTCCAGCAGGCTTTGCATCCAGCGCTGGGCGCGGATTTGTGCGGTAGTACTGGTTTCGCCGTGCTCTTTATAAGCCCAGTGCGCGGCAACACCCATCTCCGCCATCTGGTCCATATCTTCGGTAC > minE/2517972‑2518107 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |