| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | 2659853 = | 51 (0.860) | 9 (0.180) | 3/86 | NT | 18.6% | coding (211/831 nt) | glpG | predicted intramembrane serine protease |
| ? | minE | 2659878 = | 36 (0.720) | coding (236/831 nt) | glpG | predicted intramembrane serine protease | |||||
CGTACGGGCGGAGCTGGCGCGTTTTCTCGAAAACCCGGCAGATCCGCGTTATCTGGCGGCGAGCTGGCAGGCAGGCCATACCGGCAGTGGCCTGCATTATCGCCGTTATCCTTTCTTTGCCGCCTTGCGTGAACGCGCAGG > minE/2659783‑2659923 | atcatcatcacccaggttaccggacctgcgcgttcacgcaaggcggcaaagaaaggataacggcgataatg > 1:1339223‑M1/71‑71 (MQ=255) tcatcatcacccaggttaccggacctgcgcgttcacgcaaggcggcaaagaaaggataacggcgataatg < 1:2677682‑M1/1‑1 (MQ=255) tcatcatcacccaggttaccggacctgcgcgttcacgcaaggcggcaaagaaaggataacggcgataatGc > 1:1196049‑M1/70‑71 (MQ=255) catcatcacccaggttaccggacctgcgcgttcacgcaaggcggcaaagaaaggataacggcgataatg < 1:3439473‑M1/1‑1 (MQ=255) atcatcacccaggttaccggacctgcgcgttcacgcaaggcggcaaagaaaggataacggcgataatGCAg > 1:995721‑M1/68‑71 (MQ=255) atcatcacccaggttaccggacctgcgcgttcacgcaaggcggcaaagaaaggataacggcgataatGCAg > 1:3518548‑M1/68‑71 (MQ=255) aCGGGCGGAGCTGGCGCGTTTTCTCGAAAACCCGGCAGATCCGCGTTATCTGGCGGCGAGCTGgcaggcag > 1:3705828/1‑71 (MQ=255) tcatcacccaggttaccggacctgcgcgttcacgcaaggcggcaaagaaaggataacggcgataatGCAgg > 1:1251964‑M1/67‑71 (MQ=255) atcacccaggttaccggacctgcgcgttcacgcaaggcggcaaagaaaggataacggcgataatGCAGGcc > 1:1351814‑M1/65‑71 (MQ=255) atcacccaggttaccggacctgcgcgttcacgcaaggcggcaaagaaaggataacggcgataatGCAGGc > 1:22590‑M1/65‑70 (MQ=255) cGGAGCTGGCGCGTTTTCTCGAAAACCCGGCAGATCCGCGTTATCTGGCGGCGAGCTGGCAGGCAGGCCAt < 1:2278189/71‑1 (MQ=255) gCTGGCGCGTTTTCTCGAAAACCCGGCAGATCCGCGTTATCTGTCGGCGAGCTGGCAGGCAGGCCATACCg < 1:967107/71‑1 (MQ=255) caggttaccggacctgcgcgttcacgcaaggcggcaaagaaaggataacggcgataatGCAGGcc > 1:3117216‑M1/59‑65 (MQ=255) caggttaccggacctgcgcgttcacgcaaggcggcaaagaaaggataacggcgataatGCAGGcc > 1:2124549‑M1/59‑65 (MQ=255) cTGGCGCGTTTTCTCGAAAACCCGGCAGATCCGCGTTATCTGGCGGCGAGCTGGCAGGCAGGCCATACCgg > 1:2650235/1‑71 (MQ=255) cTGGCGCGTTTTCTCGAAAACCCGGCAGATCCGCGTTATCTGGCGGCGAGCTGGCAGGCAGGCCATACCgg > 1:718199/1‑71 (MQ=255) gcgcGTTTTCTCGAAAACCCGGCAGATCCGCGTTATCTGGCGGCGAGCTGGCAGGCAGGCCATACCGGc < 1:1565075/69‑1 (MQ=255) gcgTTTTCTCGAAAACCCGGCAGATCCGCGTTATCTGGCGGCGAGCTGGCAGGCAGGCCATACCGGCAGTg > 1:1546564/1‑71 (MQ=255) gcgTTTTCTCGAAAACCCGGCAGATCCGCGTTATCTGGCGGCGAGCTGGCAGGCAGGCCATACCGGCAGTg < 1:2053322/71‑1 (MQ=255) gTTTTCTCGAAAACCCGGCAGATCCGCGTTATCTGGCGGCGAGCTGGCAGGCAGGCCAt < 1:861370/59‑1 (MQ=255) tttCTCGAAAACCCGGCAGATCCGCGTTATCTGGCGGCGAGCTGgcaggcag < 1:782797/52‑1 (MQ=255) tttCTCGAAAACCCGGCAGATCCGCGTTATCTGG‑GGCGAGCTGGCAGGCAGGCCATACCGGCAGTGGCCTg > 1:941136/1‑71 (MQ=255) ttCTCGAAAACCCGGCAGATCCGCGTTATCTGGCGGCGAGCTGGCAGGCAGGCCATACCGGCAGTGGCCTg > 1:2793595/1‑71 (MQ=255) ttCTCGAAAACCCGGCAGATCCGCGTTATCTGGCGGCGAGCTGGCAGGCAGGCCATACCGGCAGTGGCCTg > 1:822178/1‑71 (MQ=255) tctcGAAAACCCGGCAGATCCGCGTTATCTGGCGGCGAGCTGGCaggcaggc > 1:1933075/1‑52 (MQ=255) cctgcgcgttcacgcaaggcggcaaagaaaggataacggcgataatGCAg > 1:1618014‑M1/47‑50 (MQ=255) gAAAACCCGGCAGATCCGCGTTATCTGGCGGCGAGCTGGCAGGCAGGCCATACCGGCAGTGGCCTGCa < 1:1986562/68‑1 (MQ=255) gAAAACCCGGCAGATCCGCGTTATCTGGCGGCGAGCTGGCAGGCAGGCCATACCGGCAGTGGCCTGCATTa > 1:2424166/1‑71 (MQ=255) aaaaCCCGGCAGATCCGCGTTATCTGGCGGCGAGCTGGCaggcaggc < 1:2357827/47‑1 (MQ=255) aaaaCCCGGCAGATCCGCGTTATCTGGCGGCGAGCTGGCaggcaggc < 1:2023637/47‑1 (MQ=255) aaaaCCCGGCAGATCCGCGTTATCTGGCGGCGAGCTGGCaggcaggc < 1:3188231/47‑1 (MQ=255) cgttcacgcaaggcggcaaagaaaggataacggcgataatGCAGGCCATACCGGCAGTGGCCTg > 1:1892888‑M1/41‑64 (MQ=255) cgttcacgcaaggcggcaaagaaaggataacggcgataatGCAGGCCATACCGGCAGTGGCCTg > 1:919189‑M1/41‑64 (MQ=255) aaCCCGGCAGATCCGCGTTATCTGGCGGCGAGCTGGCaggcaggc > 1:1567272/1‑45 (MQ=255) aaCCCGGCAGATCCGCGTTATCTGGCGGCGAGCTGGCAGGCAGGCCATACCGGCAGTGGCCTGCATTATCg > 1:3225177/1‑71 (MQ=255) aaCCCGGCAGATCCGCGTTATCTGGCGGCGAGCTGGCAGGCAGGCCATACCGGCAGTGGCCTGCATTATCg > 1:3643368/1‑71 (MQ=255) tcacgcaaggcggcaaagaaaggataacggctataatGCAg > 1:3388546‑M1/38‑41 (MQ=255) tcacgcaaggcggcaaagaaaggataacggcgataatGCAg > 1:1287294‑M1/38‑41 (MQ=255) tcacgcaaggcggcaaagaaaggataacggcgataatGCAg > 1:2265055‑M1/38‑41 (MQ=255) tcacgcaaggcggcaaagaaaggataacggcgataatGCAg > 1:3451364‑M1/38‑41 (MQ=255) tcacgcaaggcggcaaagaaaggataacggcgataatGCAg > 1:2784908‑M1/38‑41 (MQ=255) tcacgcaaggcggcaaagaaaggataacggcgataatGCAg > 1:3668859‑M1/38‑41 (MQ=255) tcacgcaaggcggcaaagaaaggataacggcgataatGCAg > 1:2610929‑M1/38‑41 (MQ=255) tcacgcaaggcggcaaagaaaggataacggcgataatGCAGGCCATACCGGCAGTGGCCt > 1:1584393‑M1/38‑60 (MQ=255) tcacgcaaggcggcaaagaaaggataacggcgataatGCAGGCCATACCGGCAGTGGCCt > 1:2882318‑M1/38‑60 (MQ=255) tcacgcaaggcggcaaagaaaggataacggcgataatGCAGGCCATACCGGCAGTGGCCt > 1:382740‑M1/38‑60 (MQ=255) tcacgcaaggcggcaaagaaaggataacggcgataatGCAGGCCATACCGGCAGTGGCCt > 1:2583716‑M1/38‑60 (MQ=255) acgcaaggcggcaaagacaggataacggcgataatGCAGGCCATACCGGCAGTGGCCTGc < 1:1138289‑M1/25‑1 (MQ=255) acgcaaggcggcaaagaaaggataacggcgataatGCAGGCCATACCGGCAGTGGCCTGc < 1:3087850‑M1/25‑1 (MQ=255) acgcaaggcggcaaagaaaggataacggcgataatGCAGGCCATACCGGCAGTGGCCTGc < 1:2416855‑M1/25‑1 (MQ=255) ggCAGATCCGCGTTATCTGGCGGCGAGCTGGCAGGCAGGCCAt > 1:1676022/1‑43 (MQ=255) gCAGATCCGCGTTATCTGGCGGCGAGCTGGCAGGCAGGCCATACCGGCAGTGGCCTGCATTATCGCCGTTa < 1:1128908/71‑1 (MQ=255) cAGATCCGCGTTATCTGGCGGCGAGCTGGCAGGCAGGCCATACCGGCAGTGGCCTGCATTATCGCCGTTa > 1:137070/1‑70 (MQ=255) cAGATCCGCGTTATCTGGCGGCGAGCTGGCAGGCAGGCCATACCGGCAGTGGCCTGCATTATCGCCGTTAt > 1:1824861/1‑71 (MQ=255) aGATCCGCGTTATCTGGCGGCGAGCTGGCAGGCAGGCCATACCGGCAGTGGCCTGCATTATCGCCGtt < 1:2800707/68‑1 (MQ=255) aGATCCGCGTTATCTGGCGGCGAGCTGGCAGGCAGGCCATACCGGCAGTGGCCTGCATTATCGCCGtt < 1:3429460/68‑1 (MQ=255) aGATCCGCGTTATCTGGCGGCGAGCTGGCAGGCAGGCCATACCGGCAGTGGCCTGCATTATCGCCGTTATc < 1:1624556/71‑1 (MQ=255) tCCGCGTTATCTGGCGGCGAGCTGGCAGGCAGGCCa > 1:716672/1‑36 (MQ=255) tCCGCGTTATCTGGCGGCGAGCTGGCAGGCAGGCCATACCGGCAGTGGCCTGCAtt > 1:3025787/1‑56 (MQ=255) tCCGCGTTATCTGGCGGCGAGCTGGCAGGCAGGCCATACCGGCAGTGGCCTGCAt > 1:1064146/1‑55 (MQ=255) tCCGCGTTATCTGGCGGCGAGCTGGCAGGCAGGCCATACCGGCAGTGGCCTGCATTATCGCCGTTATCctt < 1:2189033/71‑1 (MQ=255) tCCGCGTTATCTGGCGGCGAGCTGGCAGGCAGGCCATACCGGCAGTGGCCTGCATTATCGCCGTTATCctt < 1:56392/71‑1 (MQ=255) gcgTTATCTGGCGGCGAGCTGGCAGGCAGGCCATACCGGCAGTGGCCTGCATTATCGCCGTTATCctttct < 1:2544599/71‑1 (MQ=255) gcgTTATCTGGCGGCGAGCTGGCAGGCAGGCCATACCGGCAGTGGCCTGCATTATCGCCGTTATCctttct < 1:988381/71‑1 (MQ=255) gcgTTATCTGGCGGCGAGCTGGCAGGCAGGCCATACCGGCAGTGGCCTGCATTATCGCCGTTATCctttct < 1:816045/71‑1 (MQ=255) gcgTTATCTGGCGGCGAGCTGGCAGGCAGGCCATACCGGCAGTGGCCTGCATTATCGCCGTTATCctttct < 1:2244300/71‑1 (MQ=255) gcgTTATCTGGCGGCGAGCTGGCAGGCAGGCCATACCGGCAGTGGCCTGCATTATCGCCGTTATCctttct < 1:3158600/71‑1 (MQ=255) cgTTATCTGGCGGCGAGCTGGCAGGCAGGCCATACCGGCAGTGGCCTGCATTATCGCCGTTATCctttctt > 1:871640/1‑71 (MQ=255) gTTATCTGGCGGCGAGCTGGCAGGCAGGCCATACCGGCAGTGGCCTGCATTATCGCCGTTATCctttcttt < 1:1198631/71‑1 (MQ=255) ttATCTGGCGGCGAGCTGGCAGGCAGGCCATACCGGCAGTGGCCTGCATTATCGCCGTTATCCTTTCTTTg > 1:292194/1‑71 (MQ=255) tCTGGCGGCGAGCTGGCAGGCAGGCCATACCGGCAGTGGCCTGCATTATCGCCGTTATCCTTTCTTTgccg > 1:1462116/1‑71 (MQ=255) cTGGCGGCGAGCTGGCAGGCAGGCCATACCGGCAGTGGCCTGCATTATCGCCGTTATCCTTTCTTTgccgc > 1:1274144/1‑71 (MQ=255) ggcggcGAGCTGGCAGGCAGGCCATACCGGCAGTGGCCTGCATTATCGCCGTTATCCTTTCTTTGCCGCCt > 1:766353/1‑71 (MQ=255) ggcggcGAGCTGGCAGGCAGGCCATACCGGCAGTGGCCTGCATTATCGCCGTTATCCTTTCTTTGCCGCCt > 1:2237600/1‑71 (MQ=255) gcggcgAGCTGGCAGGCAGGCCATACCGGCAGTGGCCTGCATTATCGCCGTTATCCTTTCTTTgccgcc < 1:2233895/69‑1 (MQ=255) gcggcgAGCTGGCAGGCAGGCCATACCGGCAGTGGCCTGCATTATCGCCGTTATCCTTTCTTTGCCGCCtt > 1:2221365/1‑71 (MQ=255) gAGCTGGCAGGCAGGCCATACCGGCAGTGGCCTGCATTATCGCCGTTATCCTTTCTTTGCCGCCTTGCGt < 1:1819752/70‑1 (MQ=255) gAGCTGGCAGGCAGGCCATACCGGCAGTGGCCTGCATTATCGCCGTTATCCTTTCTTTGCCGCCTTGCGt > 1:1437554/1‑70 (MQ=255) gCTGGCAGGCAGGCCATACCGGCAGTGGCCTGCATTATCGCCGTTATCCTTTCTTTGCCGCCTTGCGTGaa < 1:1799073/71‑1 (MQ=255) gCTGGCAGGCAGGCCATACCGGCAGTGGCCTGCATTATCGCCGTTATCCTTTCTTTGCCGCCTTGCGTGaa > 1:1686622/1‑71 (MQ=255) cTGGCAGGCAGGCCATACCGGCAGTGGCCTGCATTATCGCCGTTATCCTTTCTTTGCCGCCTTGCGTGAAc < 1:1506796/71‑1 (MQ=255) ggcaggcaGGCCATACCGGCAGTGGCCTGCATTATCGCCGTTATCCTTTCTTTGCCGCCTTGCGTGAAcgc > 1:239780/1‑71 (MQ=255) gcaggcagGCCATACCGGCAGTGGCCTGCATTATCGCCGTTATCCTTTCTTTGCCGCCTTGCGTGAAcgcg > 1:3368666/1‑71 (MQ=255) caggcaggCCATACCGGCAGTGGCCTGCATTATCGCCGTTATCctt < 1:75156/46‑1 (MQ=255) caggcaggCCATACCGGCAGTGGCCTGCATTATCGCCGTTATCCTTTCTTTGCCGCCTTGCGTGAAcgcg > 1:130201/1‑70 (MQ=255) caggcaggCCATACCGGCAGTGGCCTGCATTATCGCCGTTATCCTTTCTTTGCCGCCTTGCGTGAAcgcg > 1:114117/1‑70 (MQ=255) caggcaggCCATACCGGCAGTGGCCTGCATTATCGCCGTTATCCTTTCTTTGCCGCCTTGCGTGAAcgcg > 1:3118201/1‑70 (MQ=255) GCAGGCCATACCGGCAGTGGCCTGCATTATCGCCGTTATCCTTTCTTTGCCGCCTTGCGTGa > 1:2009627‑M1/1‑62 (MQ=255) GCAGGCCATACCGGCAGTGGCCTGCATTATCGCCGTTATCCTTTCTTTGCCGCCTTGCGTGAACGCGCAgg < 1:2839757‑M1/71‑1 (MQ=255) | CGTACGGGCGGAGCTGGCGCGTTTTCTCGAAAACCCGGCAGATCCGCGTTATCTGGCGGCGAGCTGGCAGGCAGGCCATACCGGCAGTGGCCTGCATTATCGCCGTTATCCTTTCTTTGCCGCCTTGCGTGAACGCGCAGG > minE/2659783‑2659923 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |