| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | = 2753118 | 51 (0.860) | 8 (0.150) | 4/90 | NT | 12.9% | coding (224/426 nt) | zntR | DNA‑binding transcriptional activator |
| ? | minE | = 2753130 | 63 (1.210) | coding (236/426 nt) | zntR | DNA‑binding transcriptional activator | |||||
Only 100 of 123 total aligned reads displayed.
CGCCATGCCAGACAACTAGGTTTCAGTCTGGAGTCGATCCGCGAGTTGCTGTCGATCCGCATCGATCCTGAACACCATACCTGTCAGGAGTCAAAAGGCATTGTGCAGGAAAGATTGCAGGAAGTCGAAGCACGGATAGCC > minE/2753048‑2753188 | cGCCATGCCAGACAACTAGGTTTCAGTCTGGAGTCGATCCGCGAGTTGCTGTCGATCCGCATCGATCCTGA < 1:2977045‑M1/71‑1 (MQ=255) ccATGCCAGACAACTAGGTTTCAGTCTGGAGTCGATCCGCGAGTTGCTGTCGATCCGCATCGATCCTGaa > 1:3520285/1‑70 (MQ=255) cATGCCAGACAACTAGGTTTCAGTCTGGAGTCGATCCGCGAGTTGCTGTCGATCCGCATCGATCCTGAaca > 1:2843470/1‑71 (MQ=255) ccAGCCAACTAGGTTTCAGTCTGGAGTCGATCCGCGAGTTGCTGTCGATCCGCATCGATCCTGAACACCa > 1:2893248/1‑70 (MQ=255) ccAGACAACTAGGTTTCAGTCTGGAGTCGATCCGCGAGTTGCTGTCGATCCGCATCGATCCTGCACACCa < 1:482061/70‑1 (MQ=255) aGACAACTAGGTTTCAGTCTGGAGTCGATCCGCGAGTTGCTGTCGATCCGCATCGATCCTGAACACCATAc > 1:347488/1‑71 (MQ=255) cAACTAGGTTTCAGTCTGGAGTCGATCCGCGAGTTGCTGTCGATCCGCATCGATCCTGAACACCATACCt > 1:512943/1‑70 (MQ=255) aaCTAGGTTTCAGTCTGGAGTCGATCCGCGAGTTGCTGTCGATCCTCATCGATCCTGAACACCATACCTGt > 1:3041279‑M2/1‑70 (MQ=255) ggTTTCAGTCTGGAGTCGATCCGCGAGTTGCTGTCGATCCGCATCGATCCTGAACACCATACCTGtcag < 1:2953159‑M2/69‑5 (MQ=255) ggTTTCAGTCTGGAGTCGATCCGCGAGTTGCTGTCGATCCGCATCGATCCTGAACACCATACCTGtcag < 1:2739805‑M2/69‑5 (MQ=255) tCAGTCTGGAGTCGATCCGCGAGTTGCTGTCGATCCGCATCGATCCTGAACACCATACCTGTCAGGAGTc > 1:1237575/1‑70 (MQ=255) aGTCTGGAGTCGATCCGCGAGTTGCTGTCGATCCGCATCGATCCTGAACACCATACCTGtcag > 1:3008546‑M2/1‑59 (MQ=255) aGTCTGGAGTCGATCCGCGAGTTGCTGTCGATCCGCATCGATCCTGAACACCATACCTGtcag > 1:3485188‑M2/1‑59 (MQ=255) aGTCTGGAGTCGATCCGCGAGTTGCTGTCGATCCGCATCGATCCTGAACACCATACCTGtcag > 1:242871‑M2/1‑59 (MQ=255) aGTCTGGAGTCGATCCGCGAGTTGCTGTCGATCCGCATCGATCCTGAACACCATACCTGtcag > 1:366541‑M2/1‑59 (MQ=255) aGTCTGGAGTCGATCCGCGAGTTGCTGTCGATCCGCATCGATCCTGAACACCATACCTGtcag > 1:1513436‑M2/1‑59 (MQ=255) aGTCTGGAGTCGATCCGCGAGTTGCTGTCGATCCGCATCGATCCTGAACACCATACCTGTCAGGAGTCaa < 1:1998475/70‑1 (MQ=255) aGTCTGGAGTCGATCCGCGAGTTGCTGTCGATCCGCATCGATCCTGAACACAATACCTGTCAGGAGTCaa < 1:3722501/70‑1 (MQ=255) gTCTGGAGTCGATCCGCGAGTTGCTGTCGATCCGCATCGATCCTGAcaggtatggtgttc < 1:844245‑M1/60‑15 (MQ=255) gTCTGGAGTCGATCCGCGAGTTGCTGTCGATCCGCATCGATCCTGAACACCATACCTGTCAGGAGTCaa > 1:2420167/1‑69 (MQ=255) tCTGGAGTCGATCCGCGAGTTGCTGTCGATCCGCATCGATCCTGAACACCATACCTGTCAGGAGTCAAAAg > 1:1065341/1‑71 (MQ=255) cTGGAGTCGATCCGCGAGTTGCTGTCGATCCGCATCGATCCTGAACACCATACCTGTCAGGAGTCAAAAgg > 1:2708639/1‑71 (MQ=255) tGGAGTCGATCCGCGAGTTGCTGTCGATCCGCATCGATCCTGAacac > 1:3342083/1‑47 (MQ=255) tGGAGTCGATCCGCGAGTTGCTGTCGATCCGCATCGATCCTGAACACCATACCTGtcagga < 1:3152973‑M2/61‑7 (MQ=255) gAGTCGATCCGCGAGTTGCTGTCGATCCGCATCGATCCTGAACACCATACCTGTCAGGAGTCAAAAGGCAt < 1:1811849/71‑1 (MQ=255) aGTCGATCCGCGAGTTGCTGTCGATCCGCATCGATCCTGAcaggtatggtgttcaggat > 1:1124564‑M1/1‑40 (MQ=255) aGTCGATCCGCGAGTTGCTGTCGATCCGCATCGATCCTGAcaggtatggtgttcaggat > 1:426143‑M1/1‑40 (MQ=255) tCGATCCGCGAGTTGCTGTCGATCCGCATCGATCCTGAACACCATACCTGtca > 1:2717701‑M2/1‑50 (MQ=255) tCGATCCGCGAGTTGCTGTCGATCCGCATCGATCCTGAACACCATACCTGtca > 1:3641866‑M2/1‑50 (MQ=255) tCGATCCGCGAGTTGCTGTCGATCCGCATCGATACTGAACACCATACCTGTCAGGAGTCAAAAGGCATtgt > 1:1619257/1‑71 (MQ=255) gATCCGCGAGTTGCTGTCGATCCGCATCGATCCTGAACACCATACCTGTCAGGAGTCAAAAGGCATtgtg < 1:1592146/70‑1 (MQ=255) gATCCGCGAGTTGCTGTCGATCCGCATCGATCCTGAACACCATACCTGTCAGGAGTCAAAAGGCATTGTGc < 1:3077612/71‑1 (MQ=255) gATCCGCGAGTTGCTGTCGATCCGCATCGATCCTGAACACCATACCTGTCAGGAGTCAAAAGGCATTGTGc < 1:474748/71‑1 (MQ=255) tCCGCGAGTTGCTGTCGATCCGCATCGATCCTGAACACCATACCTGtcag > 1:2352689‑M2/1‑46 (MQ=255) ccGCGAGTTGCTGTCGATCCGCATCGATCCTGAACACCATACCTGTCAGGAGTCAAAAGGCAt > 1:2746676/1‑63 (MQ=255) cagcgAGTTGCTGTCGATCCGCATCGATCCTGAACACCATACCTGTCAGGAGTCAAAAGGCATTGTGCAg > 1:492941/3‑70 (MQ=255) cgcgAGTTGCTGTCGATCCGCATCGATCCTGAcaggtatggtgttcag < 1:484786‑M1/48‑17 (MQ=255) cgcgAGTTGCTGTCGATCCGCATCGATCCTGAcaggtatggtgttcag < 1:868994‑M1/48‑17 (MQ=255) cgAGTTGCTGTCGATCCGCATCGATCCTGAACACCATACCTGTCAGGAGTCAAAAGGCATTGTGCAGGa > 1:692400/1‑69 (MQ=255) gAGTTGCTGTCGATCCGCATCGATCCTGAACACCATACCTGTCAGGAGTCAAAAGGCATTGTGCAgg > 1:1238028/1‑67 (MQ=255) gAGTTGCTGTCGATCCGCATCGATCCTGAACACCATACCTGTCAGGAGTCAAAAGGCATTGTGCAGGa > 1:2041412/1‑68 (MQ=255) gAGTTGCTGTCGATCCGCATCGATCCTGAACACCATACCTGTCAGGAGTCAAAAGGCATTGTGCAGGa > 1:223248/1‑68 (MQ=255) aGTTGCTGTCGATCCGCATCGATCCTGAACACCATACCTGtca < 1:3581970‑M2/43‑4 (MQ=255) ttGCTGTCGATCCGCATCGATCCTGAACACCATACCTGt > 1:3650245‑M2/1‑38 (MQ=255) ttGCTGTCGATCCGCATCGATCCTGAACACCATACCTGt > 1:1901853‑M2/1‑38 (MQ=255) gTCGATCCGCATCGATCCTGAACACCATACCTGTCAGGAGTCAAAAGGCATTGTGCAGGaaa < 1:3058201/62‑1 (MQ=255) cGATCCGCATCGATCCTGAACACCATACCTGTCAGGAGTCAAAAgg > 1:2716803/1‑46 (MQ=255) cGATCCGCATCGATCCTGAACACCATACCTGTCAGGAGTCAAAAGGc > 1:1782979/1‑47 (MQ=255) gATCCGCATCGATCCTGAACACCATACCTGTCAGGAGTCAAAAGGCATTGTGCAGGAAAGATTGCAGGaa < 1:1346882/70‑1 (MQ=255) gATCCGCATCGATCCTGAACACCATACCTGTCAGGAGTCAAAAGGCATTGTGCAGGAAAGATTGCAGGAAg > 1:3105069/1‑71 (MQ=255) ccGCATCGATCCTGAACACCATACCTGTCAGGAGTCAAAAGGCATTGTGCAGGAAAGATTGCAGGAAGTc > 1:1511516/1‑70 (MQ=255) gCATCGATCCTGAACACCATACCTGTCAGGAGTCAAAAGGCATTGTGCAGGAAAGATTGCAGGAAGTCGaa < 1:1908650/71‑1 (MQ=255) gCATCGATCCTGAACACCATACCTGTCAGGAGTCAAAAGGCATTGTGCAGGAAAGATTGCAGGAAGTCGaa < 1:641761/71‑1 (MQ=255) gCATCGATCCTGAACACCATACCTGTCAGGAGTCAAAAGGCATTGTGCAGGAAAGATTGCAGGAAGTCGaa < 1:3202996/71‑1 (MQ=255) aTCGATCCTGAACACCATACCTGTCAGGAGTCAAAAGGCATTGTGCAGGAAAGATTGCAGGAAGTCg < 1:1280924/67‑1 (MQ=255) aTCGATCCTGAACACCATACCTGTCAGGAGTCAAAAGGCATTGTGCAGGAAAGATTGCAGGAAGTCg < 1:240314/67‑1 (MQ=255) aTCGATCCTGAACACCATACCTGTCAGGAGTCAAAAGGCATTGTGCAGGAAAGATTGCAGGAAGTCGAAGc < 1:322182/71‑1 (MQ=255) tCGATCCTGAACACCATACCTGTCAGGAGTCAAAAGGCATTGTGCa > 1:1236683/1‑46 (MQ=255) tCGATCCTGAACACCATACCTGTCAGGAGTCAAAAGGCATTGTGCAGGAAAGATTGCAGGAAGTc < 1:2262217/65‑1 (MQ=255) tCGATCCTGAACACCATACCTGTCAGGAGTCAAAAGGCATTGTGCAGGAAAGATTGCAGGAAGTc < 1:214495/65‑1 (MQ=255) gATCCTGAACACCATACCTGTCAGGAGTCAAAAGGCATTGTGCAGGAAAGATTGCa > 1:2674888/1‑56 (MQ=255) gATCCTGAACACCATACCTGTCAGGAGTCAAAAGGCATTGTGCAGGAAAGATTGCa > 1:1970189/1‑56 (MQ=255) gATCCTGAACACCATACCTGTCAGGAGTCAAAAGGCATTGTGCAGGAAAGATTGCAGGAAGTCGAAGCACg > 1:3351584/1‑71 (MQ=255) aTCCTGAACACCATACCTGtcaggatcgatgcggatcgacagcaactcgcggatcgact > 1:1124564‑M2/1‑19 (MQ=255) aTCCTGAACACCATACCTGtcaggatcgatgcggatcgacagcaactcgcggatcgact > 1:426143‑M2/1‑19 (MQ=255) tCCTGAcaggtatggtgttcaggatcgatgcggatcgacagcaactcgcggatcgactcca < 1:3152973‑M1/61‑56 (MQ=255) tCCTGAcaggtatggtgttcaggatcgatgcggatcgacagcaactcgcggatcgactcca < 1:2744369‑M1/61‑56 (MQ=255) ccTGAACACCATACCTGTCAGGAGTCAAAAGGCATTGTGCAGGAAAGATTGCAGGAAGTCGAAGCACGGa > 1:1224230/1‑70 (MQ=255) ccTGAACACCATACCTGTCAGGAGTCAAAAGGCATTGTGCAGGAAAGATTGCAGGAAGTCGAAGCACGGa > 1:797583/1‑70 (MQ=255) ccTGAACACCATACCTGTCAGGAGTCAAAAGGCATTGTGCAGGAAAGATTGCAGGAAGTCGAAGCACGGa > 1:631337/1‑70 (MQ=255) ccTGAACACCATACCTGTCAGGAGTCAAAAGGCATTGTGCAGGAAAGATTGCAGGAAGTCGAAGCACGGa > 1:1402677/1‑70 (MQ=255) cTGAcaggtatggtgttcaggatcgatgcggatcgacagcaactcgcggatcgactccagactgaaacc < 1:2953159‑M1/69‑66 (MQ=255) cTGAcaggtatggtgttcaggatcgatgcggatcgacagcaactcgcggatcgactccagactgaaacc < 1:2739805‑M1/69‑66 (MQ=255) cTGAcaggtatggtgttcaggatcgatgcggatcgacagcaactcgcggatcgactccagact > 1:366541‑M1/1‑4 (MQ=255) cTGAcaggtatggtgttcaggatcgatgcggatcgacagcaactcgcggatcgactccagact > 1:3485188‑M1/1‑4 (MQ=255) cTGAcaggtatggtgttcaggatcgatgcggatcgacagcaactcgcggatcgactccagact > 1:3008546‑M1/1‑4 (MQ=255) cTGAcaggtatggtgttcaggatcgatgcggatcgacagcaactcgcggatcgactccagact > 1:242871‑M1/1‑4 (MQ=255) cTGAcaggtatggtgttcaggatcgatgcggatcgacagcaactcgcggatcgactccagact > 1:1513436‑M1/1‑4 (MQ=255) cTGAcaggtatggtgttcaggatcgatgcggatcgacagcaactcgcgga > 1:2121120‑M1/1‑4 (MQ=255) cTGAACACCATACCTGtcaggatcgatgcggatcgacagcaactcgcg < 1:484786‑M2/48‑33 (MQ=255) cTGAACACCATACCTGtcaggatcgatgcggatcgacagcaactcgcg < 1:868994‑M2/48‑33 (MQ=255) cTGAACACCATACCTGtcaggatcgatgcggatcgacagcaactcgcg < 1:2663765‑M2/48‑33 (MQ=255) cTGAACACCATACCTGTCAGGAGTCAAAAGGCATTGTGCAGGAAAGATTGCAGGAAGt < 1:362652/58‑1 (MQ=255) cTGAACACCATACCTGTCAGGAGTCAAAAGGCATTGTGCAGGAAAGATTGCAGGAAGt < 1:409032/58‑1 (MQ=255) cTGAACACCATACCTGTCAGGAGTCAAAAGGCATTGTGCAGGAAAGATTGCAGGAAGt < 1:358338/58‑1 (MQ=255) cTGAACACCATACCTGTCAGGAGTCAAAAGGCATTGTGCAGGAAAGATTGCAGGAAGt < 1:1034605/58‑1 (MQ=255) cTGAACACCATACCTGTCAGGAGTCAAAAGGCATTGTGCAGGAAAGATTGCAGGAAGTCGAAGCACGGa > 1:2976682/1‑69 (MQ=255) tGAcaggtatggtgttcaggatcgatgcggatcgacagcaactcgcggatcga > 1:3641866‑M1/1‑3 (MQ=255) tGAACACCATACCTGTCAGGAGTCAAAAGGCATTGTGCAGGAAAGATTGCAGGAAGTCGAAGCACGGATAg > 1:1029536/1‑71 (MQ=255) gAACACCATACCTGtcaggatcgatgcggatcgacagcaactcgcggatcgactccagac < 1:844245‑M2/60‑47 (MQ=255) gAACACCATACCTGTCAGGAGTCAAAAGGCATTGTGCAGGAAAGATTGc < 1:2153645/49‑1 (MQ=255) gAACACCATACCTGTCAGGAGTCAAAAGGCATTGTGCAGGAAAGATTGc < 1:1279205/49‑1 (MQ=255) gAACACCATACCTGTCAGGAGTCAAAAGGCATTGTGCAGGAAAGATTGCAGGAAGTCGAAGCACGGATAGc > 1:1569893/1‑71 (MQ=255) acaggtatggtgttcaggatcgatgcggatcgacagcaactcgcggatcgactccagactgaaacctagtt > 1:1237028‑M1/1‑1 (MQ=255) acaggtatggtgttcaggatcgatgcggatcgacagcaa > 1:1901853‑M1/1‑1 (MQ=255) acaggtatggtgttcaggatcgatgaggatcgacagcaactcgcggatcgactccagactgaaacctagtt > 1:3041279‑M1/1‑1 (MQ=255) aaCACCATACCTGTCAGGAGTCAAAAGGCATTGTGCAGGAAAGATTGCAGGAAGTCGAAGCACGGATAg < 1:155903/69‑1 (MQ=255) aaCACCATACCTGTCAGGAGTCAAAAGGCATTGTGCAGGAAAGATTGCAGGAAGTCGAAGCACGGATAg < 1:1217083/69‑1 (MQ=255) aaCACCATACCTGTCAGGAGTCAAAAGGCATTGTGCAGGAAAGATTGCAGGAAGTCGAAGCACGGATAg < 1:3246642/69‑1 (MQ=255) aaCACCATACCTGTCAGGAGTCAAAAGGCATTGTGCAGGAAAGATTGCAGGAAGTCGAAGCACGGATAg < 1:3250763/69‑1 (MQ=255) | CGCCATGCCAGACAACTAGGTTTCAGTCTGGAGTCGATCCGCGAGTTGCTGTCGATCCGCATCGATCCTGAACACCATACCTGTCAGGAGTCAAAAGGCATTGTGCAGGAAAGATTGCAGGAAGTCGAAGCACGGATAGCC > minE/2753048‑2753188 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |