| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | = 2834189 | 85 (1.440) | 12 (0.220) | 4/96 | NT | 12.1% | coding (1503/1647 nt) | groL | Cpn60 chaperonin GroEL, large subunit of GroESL |
| ? | minE | = 2834202 | 94 (1.690) | coding (1516/1647 nt) | groL | Cpn60 chaperonin GroEL, large subunit of GroESL | |||||
Only 100 of 147 total aligned reads displayed.
ACAACGCAGCAACCGAAGAATACGGCAACATGATCGACATGGGTATCCTGGATCCAACCAAAGTAACTCGTTCTGCTCTGCAGTACGCAGCTTCTGTGGCTGGCCTGATGATCACCACCGAATGCATGGTTACCGACCTGC > minE/2834119‑2834259 | aCAACGCAGCAACCGAAGAATACGGCAACATGATCGACATGGGTATCCTGGATCCAACCAAAGTAACTCGT > 1:1264747‑M1/1‑71 (MQ=255)aCAACGCAGCAACCGAAGAATACGGCAACATGATCGACATGGGTATCCTGGATCCAACCAAAGTAACTCGT > 1:232372‑M1/1‑71 (MQ=255)aCAACGCAGCAACCGAAGAATACGGCAACATGATCGACATGGGTATCCTGGATCCAACCAAAGTAACTCGT > 1:2134264‑M1/1‑71 (MQ=255) aaCGCAGCAACCGAAGAATACGGCAACATGATCGACATGGGTATCCTGGATCCAACCAAAGTAACTCGTtc < 1:1613601/71‑1 (MQ=255) aCGCAGCAACCGAAGAATACGGCAACATGATCGACATGGGTATCCTGGATCCAACCAAAGTAACTCGTtc < 1:897501/70‑1 (MQ=255) cGCAGCAACCGAAGAATACGGCAACATGATCGACATGGGTATCCTGGATCCAACCAAAGTAACTCGTtctg < 1:456721/71‑1 (MQ=255) cGCAGCAACCGAAGAATACGGCAACATGATCGACATGGGTATCCTGGATCCAACCAAAGTAACTCGTtctg < 1:2442364/71‑1 (MQ=255) gcagcaACCGAAGAATACGGCAACATGATCGACATGGGTATCCTGGATCCAACCAAAGTAACTCGTtctgc < 1:1656003/71‑1 (MQ=255) gcagcaACCGAAGAATACGGCAACATGATCGACATGGGTATCCTGGATCCAACCAAAGTAACTCGTtctgc < 1:2028874/71‑1 (MQ=255) gcagcaACCGAAGAATACGGCAACATGATCGACATGGGTATCCTGGATCCAACCAAAGTAACTCGTtctgc < 1:1813467/71‑1 (MQ=255) cagcaACCGAAGAATACGGCAACATGATCGACATGGGTATCCTGGATCCAACCAAAGTAACTCGTtctgct > 1:263583/1‑71 (MQ=255) gcaACCGAAGAATACGGCAACATGATCGACATGGGTATCCTGGATCCAACCAAAGTAACTCGTtctgctct > 1:3459246/1‑71 (MQ=255) aaCCGAAGAATACGGCAACATGATCGACATGGGTATCCTGGATCCAACCAAAGTAACTCGTtctgctctg < 1:2481478/70‑1 (MQ=255) aagaaTACGGCAACATGATCGACATGGGTATCCTGGATCCAACCAAAGTAACTCGTtct > 1:677648/1‑59 (MQ=255) aagaaTACGGCAACATGATCGACATGGGTATCCTGGATCCAACCAAAGTAACTCGTactgcagagcagaac < 1:378339‑M1/71‑16 (MQ=255) aagaaTACGGCAACATGATCGACATGGGTATCCTGGATCCAACCAAAGTAACTCGTTCTGCTCTGCAGTac < 1:2183240‑M2/71‑3 (MQ=255) agaaTACGGCAACATGATCGACATGGGTATCCTGGATCCAACCAAAGTAACTCGTTCTGCTCTGCAGTacg < 1:3087849‑M2/71‑4 (MQ=255) gaaTACGGCAACATGATCGACATGGGTATCCTGGATCCAACCAAAGTAACTCGTtctg < 1:3056754/58‑1 (MQ=255) gaaTACGGCAACATGATCGACATGGGTATCCTGGATCCAACCAAAGTAACTCGTTCTGCTCTGCAGTACGc < 1:1740804/71‑1 (MQ=255) aaTACGGCAACATGATCGACATGGGTATCCTGGATCCAACCAAAGTAACTCGTTCTGCTCTGCAGTacg > 1:3584087‑M2/1‑66 (MQ=255) aTACGGCAACATGATCGACATGGGTATCCTGGATCCAACCAAAGTAACTCGTtctgct > 1:2155099/1‑58 (MQ=255) tACGGCAACATGATCGACATGGGTATCCTGGATCCAACCAAAGTAACTCGTTCTGCTCTGCAGTACGCAGc > 1:3678378/1‑71 (MQ=255) aCGGCAACATGATCGACATGGGTATCCTGGATCCAACCAAAGTAACTCGTTCTGCTCTGCAGTACGc < 1:806949/67‑1 (MQ=255) ggCAACATGATCGACATGGGTATCCTGGATCCAACCAAAGTAACTCGTTCTGCTCTGCAGTACGCAGCTTc < 1:3105230/71‑1 (MQ=255) ggCAACATGATCGACATGGGTATCCTGGATCCAACCAAAGTAACTCGTTCTGCTCTGCAGTACGCAGCTTc > 1:874828/1‑71 (MQ=255) gCAACATGATCGACATGGGTATCCTGGATCCAACCAAAGTAACTCGTTCTGCTCTGCAGTACGCAGCTTCt < 1:643698/71‑1 (MQ=255) cAACATGATCGACATGGGTATCCTGGATCCAACCAAAGTAACTCGTTCTGCTCTGCAGTACGCAGCTTCtg > 1:2878161/1‑71 (MQ=255) aaCATGATCGACATGGGTATCCTGGATCCAACCAAATTAACTCGTTCTGCTCTGCAGTACGCAGCTTCt < 1:3689454/69‑1 (MQ=255) aaCATGATCGACATGGGTATCCTGGATCCAACCAAAGTAACTCGTTCTGCTCTGCAGTACGCAGCTTCtgt < 1:624671/71‑1 (MQ=255) aaCATGATCGACATGGGTATCCTGGATCCAACCAAAGTAACTCGTTCTGCTCTGCAGTACGCAGCTTCtgt < 1:558829/71‑1 (MQ=255) aCATGATCGACATGGGTATCCTGGATCCAACCAAAGTAACTCGTTCTGCTCTGCAGTACGCAGCTTCtgtg > 1:2709754/1‑71 (MQ=255) aCATGATCGACATGGGTATCCTGGATCCAACCAAAGTAACTCGTTCTGCTCTGCAGTACGCAGCTTCtgtg > 1:1320608/1‑71 (MQ=255) aCATGATCGACATGGGTATCCTGGATCCAACCAAAGTAACTCGTTCTGCTCTGCAGTACGCAGCTTCtgtg > 1:3234720/1‑71 (MQ=255) aCATGATCGACATGGGTATCCTGGATCCAACCAAAGTAACTCGTTCTGCTCTGCAGTACGCAGCTTCtgtg > 1:712290/1‑71 (MQ=255) aTGATCGACATGGGTATCCTGGATCCAACCAAAGTAACTCGTTCTGCTCTGCAGTACGCAGCTTCTGtggc > 1:3227891/1‑71 (MQ=255) aTGATCGACATGGGTATCCTGGATCCAACCAAAGTAACTCGTTCTGCTCTGCAGTACGCAGCTTCTGtggc > 1:147536/1‑71 (MQ=255) aTGATCGACATGGGTATCCTGGATCCAACCAAAGTAACTCGTTCTGCTCTGCAGTACGCAGCTTCTGtggc > 1:1127478/1‑71 (MQ=255) tCGACATGGGTATCCTGGATCCAACCAAAGTAACTCGTTCTGCTCTGCAGTACGCAGCTTCTGtggctggc < 1:2388752/71‑1 (MQ=255) cATGGGTATCCTGGATCCAACCAAAGTAACTCGTTCTGCTCTGCAGTACGCAGCTTCTGTGGCTGGCCtga > 1:96462/1‑71 (MQ=255) cATGGGTATCCTGGATCCAACCAAAGTAACTCGTTCTGCTCTGCAGTACGCAGCTTCTGTGGCTGGCCtga < 1:1367225/71‑1 (MQ=255) cATGGGTATCCTGGATCCAACCAAAGTAACTCGTTCTGCTCTGCAGTACGCAGCTTCTGTGGCTGGCCtga < 1:1573278/71‑1 (MQ=255) aTGGGTATCCTGGATCCAACCAAAGTAACTCGTTCTGCTCTGCAGTACGc < 1:2058858/50‑1 (MQ=255) aTGGGTATCCTGGATCCAACCAAAGTAACTCGTTCTGCTCTGCAGTACGCAGCTTCTGTGGCTGGCCtgat < 1:1787451/71‑1 (MQ=255) tGGGTATCCTGGATCCAACCAAAGTAACTCGTTCTGCTCTGCAGTACGCAGCTTCTGTGGCTGGCCtgatg < 1:2455338/71‑1 (MQ=255) tGGGTATCCTGGATCCAACCAAAGTAACTCGTTCTGCTCTGCAGTACGCAGCTTCTGTGGCTGGCCtgatg < 1:1646081/71‑1 (MQ=255) ggTATCCTGGATCCAACCAAAGTAACTCGTTCTGCTCTGCAGTACGCAGCTTCTGTGGCTGGCCtgatga < 1:2936249/70‑1 (MQ=255) gTATCCTGGATCCAACCAAAGTAACTCGTactgcagagcagaa < 1:3383651‑M1/43‑15 (MQ=255) gTATCCTGGATCCAACCAAAGTAACTCGTactgcagagcagaa < 1:3504793‑M1/43‑15 (MQ=255) gTATCCTGGATCCAACCAAAGTAACTCGTactgcagagcagaa < 1:1870975‑M1/43‑15 (MQ=255) aTCCTGGATCCAACCAAAGTAACTCGTactgcagagcagaacg > 1:3322574‑M1/1‑27 (MQ=255) aTCCTGGATCCAACCAAAGTAACTCGTactgcagagcagaacg > 1:346934‑M1/1‑27 (MQ=255) aTCCTGGATCCAACCAAAGTAACTCGTactgcagagcagaacg > 1:1027325‑M1/1‑27 (MQ=255) tCCTGGATCCAACCAAAGTAACTCGTTCTGCTCTGCAGTACGCAGCTTCTGTGGCTGGCCTGATGATcac < 1:1022573/70‑1 (MQ=255) tCCTGGATCCAACCAAAGTAACTCGTTCTGCTCTGCAGTACGCAGCTTCTGTGGCTGGCCTGATGATcac < 1:404198/70‑1 (MQ=255) tCCTGGATCCAACCAAAGTAACTCGTTCTGCTCTGCAGTACGCAGCTTCTGTGGCTGGCCTGATGATcac < 1:2988290/70‑1 (MQ=255) tCCTGGATCCAACCAAAGTAACTCGTTCTGCTCTGCAGTACGCAGCTTCTGTGGCTGGCCTGATGATcac < 1:3159963/70‑1 (MQ=255) tCCTGGATCCAACCAAAGTAACTCGTTCTGCTCTGCAGTACGCAGCTTCTGTGGCTGGCCTGATGATcac < 1:2710642/70‑1 (MQ=255) cTGGATCCAACCAAAGTAACTCGTTCTGCTCTGCAGTACGCAg > 1:3147832/1‑43 (MQ=255) ggATCCAACCAAAGTAACTCGTactgcagagcagaac > 1:1848873‑M1/1‑22 (MQ=255) ggATCCAACCAAAGTAACTCGTactgcagagcagaac > 1:717497‑M1/1‑22 (MQ=255) ggATCCAACCAAAGTAACTCGTactgcagagcagaac > 1:575962‑M1/1‑22 (MQ=255) ggATCCAACCAAAGTAACTCGTactgcagagcagaac > 1:2310054‑M1/1‑22 (MQ=255) ggATCCAACCAAAGTAACTCGTactgcagagcagaac > 1:2940597‑M1/1‑22 (MQ=255) ggATCCAACCAAAGTAACTCGTTCTGCTCTGCAGTACGCAGCTTCTGTGGCTGGCCTGATGATCaccacc > 1:3009128/1‑70 (MQ=255) ggATCCAACCAAAGTAACTCGTTCTGCTCTGCAGTACGCAGCTTCTGTGGCTGGCCTGATGATCaccacc > 1:1768920/1‑70 (MQ=255) ccaaccaaAGTAACTAGTTCTCCTATGCAGTACGc > 1:1614499/1‑35 (MQ=255) caaccaaAGTAACTCGTTCTGCTCTGCAGTACGCAGCTTCTGTGGCTGGCCtga > 1:3449927/1‑54 (MQ=255) aaccaaAGTAACTCGTTCTGCTCTGCAGTACGCAGCTTCTGTGGCTGGCCTGATGATCACCACCGAATGc < 1:918239/70‑1 (MQ=255) accaaAGTAACTCGTTCTGCTCTGCAGTACGCAGCTTCTGTGGCTGGCCTGATGATCACCACCGAATGCAt < 1:1607645/71‑1 (MQ=255) accaaAGTAACTCGTTCTGCTCTGCAGTACGCAGCTTCTGTGGCTGGCCTGATGATCACCACCGAATGCAt < 1:3513317/71‑1 (MQ=255) caaAGT‑ACTCGTTCTGCTCTGCAGTACGCAGCTTCTGTGGCTGGCCTGATGATCACCACCGAATGCATGGt < 1:673367/71‑1 (MQ=255) aaaGTAACTCGTTCTGCTCTGCAGTACGCAGCTTCTGtgg < 1:56908/40‑1 (MQ=255) aaGTAACTCGTTCTGCTCTGCAGTACGCAGCTTCTGTGGCTGGCCTGATGATCACCACCGAATg < 1:2470605/64‑1 (MQ=255) aaGTAACTCGTTCTGCTCTGCAGTACGCAGCTTCTGTGGCTGGCCTGATGATCACCACCGAATg < 1:172487/64‑1 (MQ=255) aaGTAACTCGTTCTGCTCTGCAGTACGCAGCTTCTGTGGCTGGCCTGATGATCACCACCGAATGCATGGtt < 1:414656/71‑1 (MQ=255) aGTAACTCGTTCTGCTCTGCAGTACGCAGCTTCTGTGGCTGGCCTgatgat > 1:957531/1‑51 (MQ=255) gTAACTCGTTCTGCTCTGCAGTACGCAGCTTCTGTGGCTGGCCGGATGATc > 1:3368024/1‑51 (MQ=255) tAACTCGTTCTGCTCTGCAGTACGCAGCTTCTGTGGCTGGCCTGATGATCACCACCGAATGCATGGTTAcc < 1:3552555/71‑1 (MQ=255) tAACTCGTTCTGCTCTGCAGTACGCAGCTTCTGTGGCTGGCCTGATGATCACCACCGAATGCATGGTTAcc < 1:1351087/71‑1 (MQ=255) tAACTCGTTCTGCTCTGCAGTACGCAGCTTCTGTGGCTGGCCTGATGATCACCACCGAATGCATGGTTAcc < 1:2616577/71‑1 (MQ=255) aCTCGTTCTGCTCTGCAGTACGCAGCTTCTGTGGCTGGCCTGATGATCACCACCGAATGCATGGTTAGCGa > 1:78840/1‑71 (MQ=255) aCTCGTTCTGCTCTGCAGTACGCAGCTTCTGTGGCTGGCCTGATGATCACCACCGAATGCATGGTTACCg < 1:1672513/70‑1 (MQ=255) aCTCGTTCTGCTCTGCAGTACGCAGCTTCTGTGGCTGGCCTGATGATCACCACCGAATGCATGGTTACCGa > 1:3500586/1‑71 (MQ=255) cTCGTTCTGCTCTGCAGTACGCAGCTTCTGTGGCTGGCCtga > 1:1852656/1‑42 (MQ=255) cTCGTTCTGCTCTGCAGTACGCAGCTTCTGTGGCTGGCCtga > 1:308709/1‑42 (MQ=255) tCGTTCTGCTCTGCAGTACGCAGCTTCTGTGGCTGGCCtgatg > 1:1541144/1‑43 (MQ=255) cGTactgcagagcagaacgagttactttggttggatccaggatacccatgtcgatcatgttgccgtattct < 1:1739996‑M1/71‑69 (MQ=255) cGTactgcagagcagaacgagttactttggttggatccaggatacccatgtcgatcatgttgccgtatt > 1:3584087‑M1/1‑3 (MQ=255) cGTactgcagagcagaacgagttactttggttggatccaggatacccatgtcgatcatgttgccgtatt < 1:944547‑M1/69‑67 (MQ=255) cGTTCTGCTCTGCAGTacgagttactttggttggatccaggat > 1:1027325‑M2/1‑16 (MQ=255) cGTTCTGCTCTGCAGTacgagttactttggttggatccaggat > 1:3322574‑M2/1‑16 (MQ=255) gTactgcagagcagaacgagttactttggttggatccaggatacccatgtcgatcatgttgccgtattctt < 1:2183240‑M1/71‑70 (MQ=255) gTTCTGCTCTGCAGTacgagttactttggttggatccaggatacccatgtcgatcatgttgccgtattctt < 1:378339‑M2/71‑57 (MQ=255) gTTCTGCTCTGCAGTacgagttactttggttggatcc > 1:1848873‑M2/1‑15 (MQ=255) gTTCTGCTCTGCAGTacgagttactttggttggatcc > 1:2940597‑M2/1‑15 (MQ=255) gTTCTGCTCTGCAGTacgagttactttggttggatcc > 1:2310054‑M2/1‑15 (MQ=255) gTTCTGCTCTGCAGTACGCAGCTTCTGTGGCTGGCCTGATGATca > 1:493390/1‑45 (MQ=255) gTTCTGCTCTGCAGTACGCAGCTTCTGTGGCTGGCCTGATGATCACCACCGAATGCATGGTTACCGAcc < 1:212646/69‑1 (MQ=255) gTTCTGCTCTGCAGTACGCAGCTTCTGTGGCTGGCCTGATGATCACCACCGAATGCATGGTTACCGACCTg < 1:1327167/71‑1 (MQ=255) tactgcagagcagaacgagttactttggttggatccaggatacccatgtcgatcatgttgccgtattcttc > 1:2884426‑M1/1‑1 (MQ=255) | ACAACGCAGCAACCGAAGAATACGGCAACATGATCGACATGGGTATCCTGGATCCAACCAAAGTAACTCGTTCTGCTCTGCAGTACGCAGCTTCTGTGGCTGGCCTGATGATCACCACCGAATGCATGGTTACCGACCTGC > minE/2834119‑2834259 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |