| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | = 2891261 | 62 (1.050) | 11 (0.220) | 3/88 | NT | 15.4% | intergenic (‑225/‑85) | ppa/ytfQ | inorganic pyrophosphatase/predicted sugar transporter subunit |
| ? | minE | = 2891268 | 67 (1.320) | intergenic (‑232/‑78) | ppa/ytfQ | inorganic pyrophosphatase/predicted sugar transporter subunit | |||||
Only 100 of 120 total aligned reads displayed.
TAGTGAGATGAAAGCGATTACAAACTTGTGATTAACGTTTTATTTACTTTTTTGAAGTGTGATGTAACGCAATCTGTTACATAACGAATTGTCTATAGTTTTTTCGCGAACATCTTTTAACCAATAATAACTACCCCG > minE/2891194‑2891331 | aGTGAGATGAAAGCGATTACAAACTTGTGATTAACGTTTTATTTACTTTTTTGAAGTGTGATGTAACGCaa > 1:2219837/1‑71 (MQ=255) gTGAGATGAAAGCGATTACAAACTTGTGATTAACGTTTTATTTACTTTTTTGAAGTGTGATGTAACGCAAt < 1:486600/71‑1 (MQ=255) agaTGAAAGCGATTACAAACTTGTGATTAACGTTTTATTTACTTTTTTGAAGTGTGATGTAACGCAATCt < 1:2095946/70‑1 (MQ=255) agaTGAAAGCGATTACAAACTTGTGATTAACGTTTTATTTACTTTTTTGAAGTGTGATGTAACGCAATCTg > 1:1541813‑M2/1‑70 (MQ=255) agaTGAAAGCGATTACAAACTTGTGATTAACGTTTTATTTACTTTTTTGAAGTGTGATGTAACGCAATCTg < 1:1664797‑M2/71‑2 (MQ=255) agaTGAAAGCGATTACAAACTTGTGATTAACGTTTTATTTACTTTTTTGAAGTGTGATGTAACGCAATCTg > 1:1748590‑M2/1‑70 (MQ=255) aTGAAAGCGATTACAAACTTGTGATTAACGTTTTATTTACTTTTTTGAAGTGTGATGTAACGCAATCTg > 1:2994661‑M2/1‑68 (MQ=255) gAAAGCGATTACAAACTTGTGATTAACGTTTTATTTACTTTTTTGAAGTGTGATGTAACGCAATCTgtta < 1:1429073‑M2/70‑5 (MQ=255) gAAAGCGATTACAAACTTGTGATTAACGTTTTATTTACTTTTTTGAAGTGTGATGTAACGCAATCTgtt < 1:491970‑M2/69‑4 (MQ=255) gATTACAAACTTGTGATTAACGTTTTATTTACTTTTTTGAAGTGTGATGTAACGCAATCTGTTACATaa > 1:1747370/1‑69 (MQ=255) gATTACAAACTTGTGATTAACGTTTTATTTACTTTTTTGAAGTGTGATGTAACGCAATCTGTTACATAAc > 1:1274458/1‑70 (MQ=255) gATTACAAACTTGTGATTAACGTTTTATTTACTTTTTTGAAGTGTGATGTAACGCAATCTGTTACATAAc > 1:3084020/1‑70 (MQ=255) aTTACAAACTTGTGATTAACGTTTTATTTACTTTTTTGAAGTGTGATGTAACagattgcgttacatcaca > 1:1892820‑M1/1‑52 (MQ=255) aTTACAAACTTGTGATTAACGTTTTATTTACTTTTTTGAAGTGTGATGTAACagattgcgttacatcaca > 1:1205323‑M1/1‑52 (MQ=255) aTTACAAACTTGTGATTAACGTTTTATTTACTTTTTTGAAGTGTGATGTAACagattgcgttacatcaca > 1:2832710‑M1/1‑52 (MQ=255) ttACAAACTTGTGATTAACGTTTTATTTACTTTTTTGAAGTGTGATGTAACGCAATCTGTTACATAACGaa > 1:960649/1‑71 (MQ=255) cAAACTTGTGATTAACGTTTTATTTACTTTTTTGAAGTGTGATGTAACGCAATCTGTTACATAACGAAtt > 1:513378/1‑70 (MQ=255) cAAACTTGTGATTAACGTTTTATTTACTTTTTTGAAGTGTGATGTAACGCAATCTGTTACATAACGAATTg > 1:3322940/1‑71 (MQ=255) aaaCTTGTGATTAACGTTTTATTTACTTTTTTGAAGTGTGATGTAACGCAATCTGTTACATAACGAATTGt < 1:457817/71‑1 (MQ=255) aCTTGTGATTAACGTTTTATTTACTTTTTTGAAGTGTGATGTAACGCAATCTGTTACATAACGAATTGTCt < 1:421296/71‑1 (MQ=255) gtgATTAACGTTTTATTTACTTTTTTGAAGTGTGATGTAACGCAATCTGTTACATAACGAATTGTCta > 1:2458333/1‑68 (MQ=255) aTTAACGTTTTATTTACTTTTTTGAAGTGTGATGTAACagattgcgtta < 1:96822‑M1/49‑12 (MQ=255) aTTAACGTTTTATTTACTTTTTTGAAGTGTGATGTAACagattgcgtta < 1:1724123‑M1/49‑12 (MQ=255) aTTAACGTTTTATTTACTTTTTTGAAGTGTGATGTAACagattgcgtta < 1:178010‑M1/49‑12 (MQ=255) aTTAACGTTTTATTTACTTTTTTGAAGTGTGATGTAACGCAATCTgttac > 1:3647520‑M2/1‑45 (MQ=255) aTTAACGTTTTATTTACTTTTTTGAAGTGTGATGTAACGCAATCTGTTACATAAc < 1:1272779/55‑1 (MQ=255) aTTAACGTTTTATTTACTTTTTTGAAGTGTGATGTAACGCAATCTGTTACATAAc < 1:840900/55‑1 (MQ=255) tAACGTTTTATTTACTTTTTTGAAGTGTGATGTAACagattgcgttac < 1:2688419‑M1/48‑13 (MQ=255) tAACGTTTTATTTACTTTTTTGAAGTGTGATGTAACagattgcgttac < 1:1086353‑M1/48‑13 (MQ=255) aCGTTTTATTTACTTTTTTGAAGTGTGATGTAACGCAATCTGTTACATAACGAATTGTCTATAGtttttt < 1:2364744/70‑1 (MQ=255) cGTTTTATTTACTTTTTTGAAGTGTGATGTAACGCAATCTGTTACATAACGAATTGTCTATAGTTTTTTcg > 1:2349654/1‑71 (MQ=255) gTTTTATTTACTTTTTTGAAGTGTGATGTAACGCAATCTGTTACATAACGAATTGTCTATAGTTTTTTc > 1:454192/1‑69 (MQ=255) ttttATTTACTTTTTTGAAGTGTGATGTAACGCAATCTgtt > 1:1296723‑M2/1‑38 (MQ=255) ttttATTTACTTTTTTGAAGTGTGATGTAACGCAATCTgtt > 1:2703824‑M2/1‑38 (MQ=255) ttttATTTACTTTTTTGAAGTGTGATGTAACGCAATCTGTTACATAACGAATTGTCTATAGTTTTTTcgcg < 1:3083759/71‑1 (MQ=255) ttttATTTACTTTTTTGAAGTGTGATGTAACGCAATCTGTTACATAACGAATTGTCTATAGTTTTTTcgcg < 1:2412219/71‑1 (MQ=255) ttttATTTACTTTTTTGAAGTGTGATGTAACGCAATCTGTTACATAACGAATTGTCTATAGTTTTTTcgc < 1:1412721/70‑1 (MQ=255) ttatttaCTTTTTTGAAGTGTGATGTAACGCAATCTgtta < 1:3411928‑M2/40‑5 (MQ=255) ttatttaCTTTTTTGAAGTGTGATGTAACGCAATCTgtta < 1:1192607‑M2/40‑5 (MQ=255) ttatttaCTTTTTTGAAGTGTGATGTAACGCAATCTgtta < 1:1953284‑M2/40‑5 (MQ=255) tatttaCTTTTTTGAAGTGTGATGTAACGCAATCTGTTACATAACGAATTGTCTATAGTTTTTTCGCGaa < 1:1981394/70‑1 (MQ=255) tttaCTTTTTTGAAGTGTGATGTAACGCAATCTGTTACATAACGAATTGTCta < 1:3056831/53‑1 (MQ=255) tttaCTTTTTTGAAGTGTGATGTAACGCAATCTGTTACATAACGAATTGTCTATAGTTTTTTcg < 1:1536152/64‑1 (MQ=255) tttaCTTTTTTGAAGTGTGATGTAACGCAATCTGTTACATAACGAATTGTCTATAGTTTTTTCGCGAACa < 1:585571/70‑1 (MQ=255) tttaCTTTTTTGAAGTGTGATGTAACGCAATCTGTTACATAACGAATTGTCTATAGTTTTTTCGCGAACa < 1:3421096/70‑1 (MQ=255) ttaCTTTTTTGAAGTGTGATGTAACGCAATCTGTTACATAACGAATTGTCTATAGTTTTTTCGCGAACATc > 1:2677284/1‑71 (MQ=255) ttaCTTTTTTGAAGTGTGATGTAACGCAATCTGTTACATAACGAATTGTCTATAGTTTTTTCGCGAACATc > 1:3110178/1‑71 (MQ=255) ttaCTTTTTTGAAGTGTGATGTAACGCAATCTGTTACATAACGAATTATCTATAGTTTTTTCGCGAACATc > 1:3166591/1‑71 (MQ=255) tcaCTTTTTTGAAGTGTGATGTAACGCAATCTGTTACATAACGAATTGTCta < 1:3617593/50‑1 (MQ=255) taCTTTTTTGAAGTGTGATGTAACGCAATCTGTTACATAACGAATTGTCt < 1:1322617/50‑1 (MQ=255) taCTTTTTTGAAGTGTGATGTAACGCAATCTGTTACATAACGAATTGTCTATAGTTTTTTCGCGAACATCt > 1:2128037/1‑71 (MQ=255) taCTTTTTTGAAGTGTGATGTAACGCAATCTGTTACATAACGAATTGTCTATAGTTTTTTCGCGAACATCt > 1:624593/1‑71 (MQ=255) taCTTTTTTGAAGTGTGATGTAACGCAATCTGTTACATAACGAATTGTCTATAGTTTTTTCGCGAACATCt > 1:1891450/1‑71 (MQ=255) aCTTTTTTGAAGTGTGATGTAACGCAATCTGTTACATAACGAATTGTCTATAGTTTTTTCGCGAACATCtt > 1:2570626/1‑71 (MQ=255) cTTTTTTGAAGTGTGATGTAACGCAATCTGTTACATAACGAATTGTCTATAGTTTTTTCGCGAACATCttt > 1:2449585/1‑71 (MQ=255) cTTTTTTGAAGTGTGATGTAACGCAATCTGTTACATAACGAATTGTCTATAGTTTTTTCGCGAACATCttt > 1:2408800/1‑71 (MQ=255) cTTTTTTGAAGTGTGATGTAACGCAATCTGTTACATAACGAATTGTCTATAGTTTTTTCGCGAACATCttt < 1:1858221/71‑1 (MQ=255) ttttGAAGTGTGATGTAACGCAATCTGTTACATAACGAATTGTCTATAGTTTTTTCGCTAACATCtttt < 1:1945358/69‑1 (MQ=255) ttttGAAGTGTGATGTAACGCAATCTGTTACATAACGAATTGTCTATAGTTTTTTCGCGAACATCTTTTa < 1:3228585/70‑1 (MQ=255) ttttGAAGTGTGATGTAACGCAATCTGTTACATAACGAATTGTCTATAGTTTTTTCGCGAACATCTTTTa < 1:862936/70‑1 (MQ=255) ttGAAGTGTGATGTAACGCAATCTGTTACATAACGAATTGTCTATAGTTTTTTCGCGAACATCTTTTAAc > 1:3471698/1‑70 (MQ=255) gAAGTGTGATGTAACGCAATCTGTTACATAACGAATTGTCTATAGTTTTTTCGCGAACATCTTTTAACCaa > 1:1691925/1‑71 (MQ=255) gAAGTGTGATGTAACGCAATCTGTTACATAACGAATTGTCTATAGTTTTTTCGCGAACATCTTTTAACCaa > 1:3141948/1‑71 (MQ=255) gAAGTGTGATGTAACGCAATCTGTTACATAACGAATTGTCTATAGTTTTTTCGCGAACATCTTTTAACCaa > 1:2295712/1‑71 (MQ=255) gAAGTGTGATGTAACGCAATCTGTTACATAACGAATTGTCTATAGTTTTTTCGCGAACATCTTTTAACCaa > 1:1418849/1‑71 (MQ=255) aaGTGTGATGTAACGCAATCTGTTACATAACGAATTGTCTATAGTTTTTTCGCGAACATCTTTTAACCaa < 1:1563788/70‑1 (MQ=255) aaGTGTGATGTAACGCAATCTGTTACATAACGAATTGTCTATAGTTTTTTCGCGAACATCTTCTAACCaa < 1:2975951/70‑1 (MQ=255) aGTGTGATGTAACGCAATCTGTTACATAACGAATTGTCTATAGtttttt > 1:3600762/1‑49 (MQ=255) gtgtGATGTAACGCAATCTGTTACATAACGAATTGTCTATAGTTTTTTCGCGAACATCTTTTAACCaataa < 1:1534496/71‑1 (MQ=255) tgtgATGTAACGCAATCTgttacatcacacttcaaaaaagtaaataaaacgttaatcacaagtttgtaat > 1:1892820‑M2/1‑18 (MQ=255) tgtgATGTAACGCAATCTgttacatcacacttcaaaaaagtaaataaaacgttaatcacaagtttgtaat > 1:2832710‑M2/1‑18 (MQ=255) tgtgATGTAACGCAATCTGTTACATAACGAATTGTCTATAGTTTTTTCGCGAACATCTTTTa < 1:3621830/62‑1 (MQ=255) tgtgATGTAACGCAATCTGTTACATAACGAATTGTCTATAGTTTTTTCGCGAACATCTTTTa < 1:248616/62‑1 (MQ=255) tgATGTAACGCAATCTGTTACATAACGAATTGTCTATAGTTTTTTCGCGAACAt < 1:3715733/54‑1 (MQ=255) tgATGTAACGCAATCTGTTACATAACGAATTGTCTATAGTTTTTTCGCGAACATCTTTTAAc > 1:67221/1‑62 (MQ=255) aTGTAACGCAATCTGTTACATAACGAATTGTCTATAGTTTTTTCGCGAACATCt > 1:2083829/1‑54 (MQ=255) gTAACagattgcgttacatcacacttcaaaaaagtaaataaaacgttaat > 1:3647520‑M1/1‑5 (MQ=255) gTAACGCAATCTgttacatcacacttcaaaaaagtaaataaaacgtta < 1:1086353‑M2/48‑37 (MQ=255) gTAACGCAATCTgttacatcacacttcaaaaaagtaaataaaacgtta < 1:1387206‑M2/48‑37 (MQ=255) gTAACGCAATCTgttacatcacacttcaaaaaagtaaataaaacgtta < 1:1632302‑M2/48‑37 (MQ=255) gTAACGCAATCTgttacatcacacttcaaaaaagtaaataaaacgtta < 1:2688419‑M2/48‑37 (MQ=255) gTAACGCAATCTgttacatcacacttcaaaaaagtaaataaaacgtta < 1:2532204‑M2/48‑37 (MQ=255) tAACagattgcgttacatcacacttcaaaaaagtaaataaaacgttaatcacaagtttgtaatcgctttc < 1:1429073‑M1/70‑67 (MQ=255) tAACagattgcgttacatcacacttcaaaaaagtaaataa < 1:3411928‑M1/40‑37 (MQ=255) tAACagattgcgttacatcacacttcaaaaaagtaaataa < 1:1192607‑M1/40‑37 (MQ=255) tAACGCAATCTgttacatcacacttcaaaaaagtaaataaaacgttaat < 1:178010‑M2/49‑39 (MQ=255) tAACGCAATCTgttacatcacacttcaaaaaagtaaataaaacgttaat < 1:96822‑M2/49‑39 (MQ=255) tAACGCAATCTGTTACATAACGAATTGTCTATAGt < 1:3036116/35‑1 (MQ=255) tAACGCAATCTGTTACATAACGAATTGTCTATAGTTTTTTCGCGAACATCTTTTAACCAATAATAACTAcc > 1:2846701/1‑71 (MQ=255) tAACGCAATCTGTTACATAACGAATTGTCTATAGTTTTTTCGCGAACATCTTTTAACCAATAATAACTAcc > 1:3657870/1‑71 (MQ=255) tAACGCAATCTGTTACATAACGAATTGTCTATAGTTTTTTCGCGAACATCTTTTAACCAATAATAACTAc < 1:48640/70‑1 (MQ=255) aaCagattgcgttacatcacacttcaaaaaagtaaataaaacgttaatcacaagtttgtaatcgctttc < 1:491970‑M1/69‑67 (MQ=255) aaCagattgcgttacatcacacttcaaaaaagtaaataaaa > 1:988031‑M1/1‑3 (MQ=255) aaCagattgcgttacatcacacttcaaaaaagtaaataaaa > 1:1296723‑M1/1‑3 (MQ=255) aaCGCAATCTGTTACATAACGAATTGTCTATAGTTTTTTCGCGAACATCTTTTAACCAATAATAACTAccc > 1:3408448/1‑71 (MQ=255) aCGCAATCTGTTACATAACGAATTGTCTATAGTTTTTTCGCGAACATCTTTTAACCAATAATAACTAcccc > 1:912911/1‑71 (MQ=255) aCGCAATCTGTTACATAACGAATTGTCTATAGTTTTTTCGCGAACATCTTTTAACCAATAATAACTAcccc > 1:2277889/1‑71 (MQ=255) cagattgcgttacatcacacttcaaaaaagtaaataaaacgttaatcacaagtttgtaatcgctttcatct > 1:1541813‑M1/1‑1 (MQ=255) cagattgcgttacatcacacttcaaaaaagtaaataaaacgttaatcacaagtttgtaatcgctttcatct < 1:1664797‑M1/71‑71 (MQ=255) cagattgcgttacatcacacttcaaaaaagtaaataaaacgttaatcacaagtttgtaatcgctttcatct > 1:1748590‑M1/1‑1 (MQ=255) | TAGTGAGATGAAAGCGATTACAAACTTGTGATTAACGTTTTATTTACTTTTTTGAAGTGTGATGTAACGCAATCTGTTACATAACGAATTGTCTATAGTTTTTTCGCGAACATCTTTTAACCAATAATAACTACCCCG > minE/2891194‑2891331 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |