| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | 212436 = | 61 (1.030) | 6 (0.110) | 3/94 | NT | 10.4% | coding (344/1359 nt) | mltD | predicted membrane‑bound lytic murein transglycosylase D |
| ? | minE | 212461 = | 47 (0.860) | coding (319/1359 nt) | mltD | predicted membrane‑bound lytic murein transglycosylase D | |||||
GGATCAAAAGCGCTCTCCACTATGGGTAGTAGTACCAGTTCCATAGGCATGTTACGTTTTTTAACTTGCCCTGCTATCCAGTACATATACGGCTCTGCCCGTAAAGTTACATCGTGGAGATAGCTCTTATTGCGTAAATA > minE/212391‑212530 | acgatgtaactttacgggcagagccgtatatgtactggatagcagGGCATGTTACGTTTTTTAACTTGccc > 1:168356‑M1/46‑71 (MQ=255)acgatgtaactttacgggcagagccgtatatgtactggatagcagGGCATGTTACGTTTTTTAACTTGccc > 1:2011219‑M1/46‑71 (MQ=255) gATCAAAAGCGCTCTCCACTATGGGTAGTAGTACCAGTTCCATAGGCATGTTACGTTTTTTAACTTGccc < 1:2216921/70‑1 (MQ=255) aaaaGCGCTCTCCACTATGGGTAGTAGTACCAGTTCCATAGGCATGTTACGTTTTTTAACTTGCCCTGCt < 1:773936/70‑1 (MQ=255) aaaaGCGCTCTCCACTATGGGTAGTAGTACCAGTTCCATAGGCATGTTACGTTTTTTAACTTGCCCTGCt < 1:2400225/70‑1 (MQ=255) aaaaGCGCTCTCCACTATGGGTAGTAGTACCAGTTCCATAGGCATGTTACGTTTTTTAACTTGCCCTGCTa < 1:1637956/71‑1 (MQ=255) aaGCGCTCTCCACTATGGGTAGTAGTACCAGTTCCATAGGCATGTTACGTTTTTTAACTTGCCCTGCTATc > 1:2441666/1‑71 (MQ=255) aaGCGCTCTCCACTATGGGTAGTAGTACCAGTTCCATAGGCATGTTACGTTTTTTAACTTGCCCTGCTATc > 1:2087331/1‑71 (MQ=255) aGCGCTCTCCACTATGGGTAGTAGTACCAGTTCCATAGGCATGTTACGTTTTTTAACTTGCCCTGCTATcc < 1:771929/71‑1 (MQ=255) gcTCTCCACTATGGGTAGTAGTACCAGTTCCATAGGCATGTTACGTTTTTTAACTTGCCCTGCTATCCAGt < 1:2862442/71‑1 (MQ=255) tcCACTATGGGTAGTAGTACCAGTTCCATAGGCATGTTACGTTTTTTAACTTGCCCTGCTATCCAGTACa > 1:766358/1‑70 (MQ=255) tcCACTATGGGTAGTAGTACCAGTTCCATAGGCATGTTACGTTTTTTAACTTGCCCTGCTATCCAGTACa > 1:2555883/1‑70 (MQ=255) ccACTATGGGTAGTAGTACCAGTTCCATAGGCATGTTACGTTTTTTAACTTGCCCTGCTATCCAGTACata > 1:3048599/1‑71 (MQ=255) ccACTATGGGTAGTAGTACCAGTTCCATAGGCATGTTACGTTTTTTAACTTGCCCTGCTATCCAGTACata > 1:302289/1‑71 (MQ=255) ccACTATGGGTAGTAGTACCAGTTCCATAGGCATGTTACGTTTTTTAACTTGCCCTGCTATCCAGTACat > 1:1142694/1‑70 (MQ=255) cACTATGGGTAGTAGTACCAGTTCCATAGGCATGTTACGTTTTTTAACTTGCCCTGCTATCCAGTACatat < 1:1152229/71‑1 (MQ=255) cACTATGGGTAGTAGTACCAGTTCCATAGGCATGTTACGTTTTTTAACTTGCCCTGCTATCCAGTACata > 1:2768791/1‑70 (MQ=255) aCTATGGGTAGTAGTACCAGTTCCATAGGCATGTTACGTTTTTTAACTTGCCCTGCTATCCAGTACAtata > 1:3160101/1‑71 (MQ=255) cTATGGGTAGTAGTACCAGTTCCATAGGCATGTTACGTTTTTTAACTTGCCCTGCTATCCAGTACATATAc > 1:961197/1‑71 (MQ=255) tGGGTAGTAGTACCAGTTCCATAGGCATGTTACGTTTTTTAACTTGCCCTGCTATCCAGTACATATACGGc < 1:829071/71‑1 (MQ=255) agtagtaCCAGTTCCATAGGCATGTTACGTTTTTTAACTTGCCCTGCTATCCAGTACATATACGGCTCTGc > 1:1962406/1‑71 (MQ=255) agtaCCAGTTCCATAGGCATGTTACGTTTTTTAACTTGCCCTGCTATCCAGTACATATACGGCTCTGCCCg > 1:2344213/1‑71 (MQ=255) taCCAGTTCCATAGGGATGTTACGTTTTTTAACTTGCCCTGCTATCCAGTACata < 1:1605167/55‑1 (MQ=255) taCCAGTTCCATAGGCATGTTACGTTTTTTAACTTGCCCTGCTATc < 1:75559/46‑1 (MQ=255) taCCAGTTCCATAGGCATGTTACGTTTTTTAACTTGCCCTGCTATCCAGTACata < 1:3606706/55‑1 (MQ=255) taCCAGTTCCATAGGCATGTTACGTTTTTTAACTTGCCCTGCTATCCAGTACata < 1:913775/55‑1 (MQ=255) aCCAGTTCCATAGGCATGTTACGTTTTTTAACTTGCCCTGCTATCCAGTACATATACGGCTCTg > 1:2814047/1‑64 (MQ=255) ccAGTTCCATAGGCATGTTACGTTTTTTAACTTGCCCTGCTATCCAGTACAtata > 1:2221408/1‑55 (MQ=255) ccAGTTCCATAGGCATGTTACGTTTTTTAACTTGCCCTGCTATCCAGTACAtata > 1:1883472/1‑55 (MQ=255) ccAGTTCCATAGGCATGTTACGTTTTTTAACTTGCACTGCTATCCAGTACatat > 1:81431/1‑54 (MQ=255) aGTTCCATAGGCATGTTACGTTTTTTAACTTGCCCTGCTATCCAGTACATATACGGCTCTGCCCGTAAAGt > 1:2356420/1‑71 (MQ=255) gTTCCATAGGCATGTTACGTTTTTTAACTTGCCCTGCTATCCAGTACATATACGGCTCTGccc > 1:1646312/1‑63 (MQ=255) gTTCCATAGGCATGTTACGTTTTTTAACTTGCCCTGCTATCCAGTACATATACGGCTCTGccc > 1:2586210/1‑63 (MQ=255) ttCCATAGGCATGTTACGTTTTTTAACTTGCCCTGCTATCCAGTACATATACgg < 1:1055790/54‑1 (MQ=255) tCCATAGGCATGTTACGTTTTTTAACTTGCCCTGCTATCCAGTACATATACGGCTCTGCCCGTa > 1:3359454/1‑64 (MQ=255) tCCATAGGCATGTTACGTTTTTTAACTTGCCCTGCTATACAGTACATATACGGctc > 1:428284/1‑56 (MQ=255) cATAGGCATGTTACGTTTTTTAACTTGCCCTGCTATCCAGTACATATACGGCTCTGCCCGTAAAGTTACa < 1:239695/70‑1 (MQ=255) cATAGGCATGTTACGTTTTTTAACTTGCCCTGCTATCCAGTACATATACGGCTCTGCCCGTAAAGTTACAt > 1:3735485/1‑71 (MQ=255) tAGGCATGTTACGTTTTTTAACTTGCCCTGCTATCCAGTACATATACGGCTCTGCCCGTAAAGTTACATCg < 1:2355812/71‑1 (MQ=255) tAGGCATGTTACGTTTTTTAACTTGCCCTGCTATCCAGTACATATACGGCTCTGCCCGTAAAGTTACATCg > 1:3044654/1‑71 (MQ=255) tAGGCATGTTACGTTTTTTAACTTGCCCTGCTATCCAGTACATATACGGCTCTGCCCGTAAAGTTACATCg < 1:2260136/71‑1 (MQ=255) gggcaagttaaaaaacgtaacatgccCTGCTATCCAGTACATATACGGCTCTGCCCGTAAAGTTACATCGt > 1:168356‑M2/27‑71 (MQ=255) gggcaagttaaaaaacgtaacatgccCTGCTATCCAGTACATATACGGCTCTGCCCGTAAAGTTACATCGt > 1:2011219‑M2/27‑71 (MQ=255) ggcaagttaaaaaacgtaacatgccCTGCTATCCAGTACATATACGGCTCTGCCCGTAAAGTTACATCGTg > 1:38559‑M2/26‑71 (MQ=255) GGCATGTTACGTTTTTTAACTTGCCCTGCTATCCAGTACATATACGGCTCTGCCCGTAAAGTTa < 1:875091‑M1/64‑1 (MQ=255) caagttaaaaaacgtaacatgccCTGCTATCCAGTACATATACGGCTCTGCCCGTAAAGTTACATCGTg > 1:2066741‑M2/24‑69 (MQ=255) caagttaaaaaacgtaacatgccCTGCTATCCAGTACATATACGGCTCTGCCCGTAAAGTTACATCGTg > 1:834647‑M2/24‑69 (MQ=255) caagttaaaaaacgtaacatgccCTGCTATCCAGTACATATACGGCTCTGCCCGTAAAGTTACATCGTg > 1:845756‑M2/24‑69 (MQ=255) tGTTACGTTTTTTAACTTGCCCTGCTATCCAGTACATATACGGCTCTGCCCGTAAAGTTACATCGTGgaga < 1:2211250/71‑1 (MQ=255) gTTACGTTTTTTAACTTGCCCTGCTATCCAGTACata < 1:2060367/37‑1 (MQ=255) aCGTTTTTTAACTTGCCCTGCTATCCAGTACATATACGGCTCTGCCCGTaaa > 1:586063/1‑52 (MQ=255) aCGTTTTTTAACTTGCCCTGCTATCCAGTACATATACGGCTCTGCCCGTaaa > 1:3118278/1‑52 (MQ=255) aCGTTTTTTAACTTGCCCTGCTATCCAGTACATATACGGCTCTGCCCGTaaa > 1:1538922/1‑52 (MQ=255) aCGTTTTTTAACTTGCCCTGCTATCCAGTACATATACGGCTCTGCCCGTAAAGt > 1:1636491/1‑54 (MQ=255) gTTTTTTAACTTGCCCTGCTATCCAGTACATATACGGCTCTGCCCGTAAAGTTACATCGTGGAGATAGctc > 1:1604660/1‑71 (MQ=255) ttttttAACTTGCCCTGCTATCCAGTACATATACGGCTCTGCCCGTAAAGTTACATCGTGGAGATAGctct < 1:1295576/71‑1 (MQ=255) ttttttAACTTGCCCTGCTATCCAGTACATATACGGCTCTGCCCGTAAAGTTACATCGTGGAGATAGctct < 1:2293317/71‑1 (MQ=255) ttttAACTTGCCCTGCTATCCAGTACATATACGGCTCTGCCCGTAAAGTTACATCGTGGATATAGCTCTTa > 1:3670062/1‑71 (MQ=255) ttttAACTTGCCCTGCTATCCAGTACATATACGGCTCTGCCCGTAAAGTTACATCGTGGAGATAGCTCtt < 1:1465841/70‑1 (MQ=255) aaCTTGCCCTGCTATCCAGTACATATACGGCTCTGCCCGTAAAGTTAc < 1:2641008/48‑1 (MQ=255) aaCTTGCCCTGCTATCCAGTACATATACGGCTCTGCCCGTAAAGTTAc < 1:2240880/48‑1 (MQ=255) tgccCTGCTATCCAGTACATATACGGCTCTGCCCGTAAAGTTACATCGTGGAGATAGCTCTTATTGCGt > 1:1466614‑M2/5‑69 (MQ=255) tgccCTGCTATCCAGTACATATACGGCTCTGCCCGTAAAGTTACATCGTGGAGATAGCTCTTATTGCGTa > 1:3337470‑M2/5‑70 (MQ=255) tgccCTGCTATCCAGTACATATACGGCTCTGCCCGTAAAGTTACATCGTGGAGATAGCTCTTATTGCGTa > 1:2886855‑M2/5‑70 (MQ=255) ccCTGCTATCCAGTACATATACGGCTCTGCCCGTaaa < 1:554417‑M2/35‑1 (MQ=255) cCTGCTATCCAGTACATATACGGCTCTGCCCGTAAAGTTACATCGTGGAGATAGCTCTTATTGCGTAAata > 1:736452‑M2/2‑71 (MQ=255) cTGCTATCCAGTACATATACGGCTCTGCCCGTAAAGt > 1:1893950/1‑37 (MQ=255) | GGATCAAAAGCGCTCTCCACTATGGGTAGTAGTACCAGTTCCATAGGCATGTTACGTTTTTTAACTTGCCCTGCTATCCAGTACATATACGGCTCTGCCCGTAAAGTTACATCGTGGAGATAGCTCTTATTGCGTAAATA > minE/212391‑212530 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |