| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | 438512 = | 29 (0.490) | 11 (0.310) +ACGTATGACAAACACAGAAT |
3/62 | NT | 33.1% | intergenic (+13/‑201) | pgm/ybfP | phosphoglucomutase/hypothetical protein |
| ? | minE | 2493639 = | 44 (0.750) | intergenic (+21/‑354) | gyrB/ibpA | DNA gyrase, subunit B/heat shock chaperone | |||||
GTGCGTTTATTGAAGAGAACGCCCTGAAAGCGGCGAATATCGATATTTAATGGCGCTAACCATGCGAGCGTGCCTGATGCGCTACGCTTATCAGGCCTACGAAAATCTTGCAATGTATTGAATTTTCATGATTTTGTAGGC > minE/2493569‑2493709 | gTGCGTTTATTGAAGAGAACGCCCTGAAAGCGGCGAATATCGATATTTAATGGCGCTAACCATGCGAGCGt < 1:1802506/71‑1 (MQ=255) cGTTTATTGAAGAGAACGCCCTGAAAGCGGCGAATATCGATATTTAATGGCGCTAACCATGCGAGCGTGc < 1:3502741/70‑1 (MQ=255) cGTTTATTGAAGAGAACGCCCTGAAAGCGGCGAATATCGATATTTAATGGCGCTAACCATGCGAGCGTGc < 1:2905610/70‑1 (MQ=255) gTTTATTGAAGAGAACGCCCTGAAAGCGGCGAATATCGATATTTAATGGCGCTAACCATGCGAGCGTGc > 1:1719577/1‑69 (MQ=255) gTTTATTGAAGAGAACGCCCTGAAAGCGGCGAATATCGATATTTAATGGCGCTAACCATGCGAGCGTGCCt < 1:197104/71‑1 (MQ=255) gTTTATTGAAGAGAACGCCCTGAAAGCGGCGAATATCGATATTTAATGGCGCTAACCATGCGAGCGTGCCt < 1:2196071/71‑1 (MQ=255) tttATTGAAGAGAACGCCCTGAAAGCGGCGAATATCGATATTTAATGGCGCTAACCATGCGAGCGTGCCTg < 1:106656/71‑1 (MQ=255) tATTGAAGAGAACGCCCTGAAAGCGGCGAATATCGATATTTAATGGCGCTAACCATGCGAGCGTGc > 1:457499/1‑66 (MQ=255) tATTGAAGAGAACGCCCTGAAAGCGGCGAATATCGATATTTAATGGCGCTAACCATGCGAGCGTGCCAGa > 1:659175/1‑70 (MQ=255) aTTGAAGAGAACGCCCTGAAAGCGGCGAATATCGATATTTAATGGCGCTAACCATGCGAGCGTGCCTGa > 1:1877333/1‑69 (MQ=255) ttGAAGAGAACGCCCTGAAAGCGGCGAATATCGATATTTAATGGCGCTAACCATGCGAGCGTGcc > 1:332544/1‑65 (MQ=255) ttGAAGAGAACGCCCTGAAAGCGGCGAATATCGATATTTAATGGCGCTAACCATGCGAGCGTGcc > 1:2609526/1‑65 (MQ=255) ttGAAGAGAACGCCCTGAAAGCGGCGAATATCGATATTTAATGGCGCTAACCATGCGAGCGTGcc > 1:2510992/1‑65 (MQ=255) ttGAAGAGAACGCCCTGAAAGCGGCGAATATCGATATTTAATGGCGCTAACCATGCGAGCGTGcc > 1:1230953/1‑65 (MQ=255) agagAACGCCCTGAAAGCGGCGAATATCGATATTTAATGGCGCTAACCATGCGAGCGTGCCTGATGCGCTa > 1:3069891/1‑71 (MQ=255) agagAACGCCCTGAAAGCGGCGAATATCGATATTTAATGGCGCTAACCATGCGAGCGTGCCTGATGCGCTa > 1:2101980/1‑71 (MQ=255) gagaACGCCCTGAAAGCGGCGAATATCGATATTTAATGGCGCTAACCATGCGAGCGTGCCTGATGCGCTAc > 1:3039688/1‑71 (MQ=255) gagaACGCCCTGAAAGCGGCGAATATCGATATTTAATGGCGCTAACCATGCGAGCGTGCCTGATGCGCTAc > 1:3331775/1‑71 (MQ=255) gagaACGCCCTGAAAGCGGCGAATATCGATATTTAATGGCGCTAACCATACGAGCGTGCCTGATGCGCTAc > 1:2451003/1‑71 (MQ=255) agaACGCCCTGAAAGCGGCGAATATCGATATTTAATGGCGCTAACCATGCGAGCGTGcca > 1:1247085/1‑59 (MQ=255) agaACGCCCTGAAAGCGGCGAATATCGATATTTAATGGCGCTAACCATGCGAGCGTGCCTGATGCGCTACg < 1:361700/71‑1 (MQ=255) gaACGCCCTGAAAGCGGCGAATATCGATATTTAATGGCGCTAACCATGCGAGCGTGCCTGATGCGCTACGc < 1:2902600/71‑1 (MQ=255) gaACGCCCTGAAAGCGGCGAATATCGATATTTAATGGCGCTAACCATGCGAGCGTGCCTGATGCGCTACGc < 1:2888130/71‑1 (MQ=255) aaCGCCCTGAAAGCGGCGAATATCGATATTTAATGGCGCTAACCATGCGAGCGTGCCTGATGCGCTACGc < 1:2250455/70‑1 (MQ=255) cGCCCTGAAAGCGGCGAATATCGATATTTAATGGCGCTAACCATGCGAGCGTGCCt > 1:2981915/1‑56 (MQ=255) gCCCTGAAAGCGGCGAATATCGATATTTAATGGCGCTAACCATGCGAGCGTGCCTGATGCGCTACGCTTAt < 1:753107/71‑1 (MQ=255) gCCCTGAAAGCGGCGAATATCGATATTTAATGGCGCTAACCATACGAGCGTGCCTGATGCGCTACGCTTAt < 1:847350/71‑1 (MQ=255) cccTGAAAGAGGCGAATATCGATATTTAATGGCGCTAACCATGCGAGCGTGCCTGATGCGCTACGCTTATc < 1:3686077/71‑1 (MQ=255) ccTGAAAGCGGCGAATATCGATATTTAATGGCGCTAACCATGCGAGCGTGCCTGATGCGCTACGCTTATCa < 1:1007771/71‑1 (MQ=255) cTGAAAGCGGCGAATATCGATATTTAATGGCGCTAACCATGCGAGCGt < 1:1109213/48‑1 (MQ=255) cTGAAAGCGGCGAATATCGATATTTAATGGCGCTAACCATGCGAGCGt < 1:1419332/48‑1 (MQ=255) cTGAAAGCGGCGAATATCGATATTTAATGGCGCTAACCATGCGAGCGt < 1:2637686/48‑1 (MQ=255) cTGAAAGCGGCGAATATCGATATTTAATGGCGCTAACCATGCGAGCGTGc > 1:3533115/1‑50 (MQ=255) gggcgatcttgcgaccgcccttttttacgtatgacaaacacagaatTGCCTGATGCGCTACGCTTATc < 1:2067473‑M2/22‑1 (MQ=255) gggcgatcttgcgaccgcccttttttacgtatgacaaacacagaatTGCCTGATGCGCTACGCTTATCAgg > 1:3201815‑M2/47‑71 (MQ=255) gAAAGCGGCGAATATCGATATTTAATGGCGCTAACCATGCGAGCGt > 1:3154472/1‑46 (MQ=255) gcgatcttgcgaccgcccttttttacgtatgacaaacacagaatTGCCTGATGCGCTACGCTTATCAg > 1:1767937‑M2/45‑68 (MQ=255) aaaGCGGCGAATATCGATATTTAATGGCGCTAACCATGCGAGCGTGCCTGATGCGCTACGCTTATCAGGcc < 1:1542993/71‑1 (MQ=255) aaaGCGGCGAATATCGATATTTAATGGCGCTAACCATGCGAGCGTGCCTGATGCGCTACGCTTATCAGGc < 1:3415616/70‑1 (MQ=255) aaGCGGCGAATATCGATATTTAATGGCGCTAACCATGCGAGCGTGCCTGATGCGCTACGCTTATCAGGcc < 1:3096062/70‑1 (MQ=255) aGCGGCGAATATCGATATTTAATGGCGCTAACCATGCGAGCGTg > 1:3254915/1‑44 (MQ=255) aGCGGCGAATATCGATATTTAATGGCGCTAACCATGCGAGCGTGc > 1:2858251/1‑45 (MQ=255) ggcgAATATCGATATTTAATGGCGCTAACCATGCGAGCGTGCCTGATGCGCTACGCTTATCAGGCCTACGa < 1:795754/71‑1 (MQ=255) gcgAATATCGATATTTAATGGCGCTAACCATGCGAGCGTGCCTGAttc > 1:291671/1‑46 (MQ=255) cgAATATCGATATTTAATGGCGCTAACCATGCGAGCGTGCCTGATGCGCTACGCTTATCAGGCCTACGaaa < 1:1180549/71‑1 (MQ=255) cgAATATCGATATTTAATGGCGCTAACCATGCGAGCGTGCCTGATGCGCTACGCTTATCAGGCCTACGaaa < 1:173930/71‑1 (MQ=255) gAATATCGATATTTAATGGCGCTAACCATGCGAGCGTGCCTGATGCGCTACGCTTATCAGGCCTACGaaaa > 1:3101198/1‑71 (MQ=255) gAATATCGATATTTAATGGCGCTAACCATGCGAGCGTGCCTGATGCGCTACGCTTATCAGGCCTACGaaaa < 1:2044062/71‑1 (MQ=255) aaTATCGATATTTAATGGCGCTAACCATGCGAGCGTGCCTGATGCGCTACGCTTATCAGGCCTACGaaaa > 1:3043600/1‑70 (MQ=255) atatCGATATTTAATGGCGCTAACCATGCGAGCGt > 1:3613893/1‑35 (MQ=255) atatCGATATTTAATGGCGCTAACCATGCGAGCGTGCCTGATGCGCTACGCTTa > 1:2255713/1‑54 (MQ=255) atatCGATATTTAATGGCGCTAACCATGCGAGCGTGCCTGATGCGCTACGCTTATCAGGCCTACGAAAATc < 1:2146469/71‑1 (MQ=255) cgcccttttttacgtatgacaaacacagaatTGCCTg > 1:1470009‑M2/32‑37 (MQ=255) cgcccttttttacgtatgacaaacacagaatTGCCTGATg > 1:1702326‑M2/32‑40 (MQ=255) gATATTTAATGGCGCTAACCATGCGAGCGTGCCTGATGCGCTACg > 1:1583356/1‑45 (MQ=255) cccttttttacgtatgacaaacacagaatTGCCTGATGCGCTACGCTTATc < 1:2718674‑M2/22‑1 (MQ=255) ccttttttacgtatgacaaacacagaatTGCCTGATGCGCTACGCTTATCAGGCCTACGa > 1:2829120‑M2/29‑60 (MQ=255) tatTTAATGGCGCTAACCATGCGAGCGTGCCTGATGCGCTACGCTTATCAGGCCTACGAAAATCTTGCAAt < 1:2484424/71‑1 (MQ=255) ttttttacgtatgacaaacacagaatTGCCTGATgcgc < 1:1297375‑M2/12‑1 (MQ=255) ttttttacgtatgacaaacacagaatTGCCTGATGCGCTACGCTTATc < 1:2955670‑M2/22‑1 (MQ=255) ttttttacgtatgacaaacacagaatTGCCTGATGCGCTACGCTTATc > 1:2580393‑M2/27‑48 (MQ=255) ttttttacgtatgacaaacacagaatTGCCTGATGCGCTACGCTTATc < 1:779219‑M2/22‑1 (MQ=255) tttAATGGCGCTAACCATGCGAGCGTGCCTGATGCGCTACGCTTAt < 1:3510942/46‑1 (MQ=255) tttAATGGCGCTAACCATGCGAGCGTGCCTGATGCGCTACGCTTATCAGGCCTACGAAAATCTTGCAATg < 1:1485518/70‑1 (MQ=255) ttAATGGCGCTAACCATGCGAGCGTGCCTGATgcg > 1:2031623/1‑35 (MQ=255) ttAATGGCGCTAACCATGCGAGCGTGCCTGATGCGCTACg < 1:3552598/40‑1 (MQ=255) tAATGGCGCTAACCATGCGAGCGTGCCTGATGCGCTACGCTTATCa > 1:721011/1‑46 (MQ=255) tAATGGCGCTAACCATGCGAGCGTGCCTGATGCGCTACGCTTATCa > 1:1194292/1‑46 (MQ=255) tAATGGCGCTAACCATGCGAGCGTGCCTGATGCGCTACGCTTATCAGGCCTACGAAAATCTTGc > 1:1621654/1‑64 (MQ=255) tGGCGCTAACCATGCGAGCGTGCCTGATGCGCTACGCTTATCAGGCCTACGAAAATCTTGCAATGTATTg > 1:3265286/1‑70 (MQ=255) acgtatgacaaacacagaatTGCCTGATGCGCTACGCTTATCAGGCCTa > 1:2255182‑M2/21‑49 (MQ=255) cgcTAACCATGCGAGCGTGCCTGATGCGCTACGCTTATCAGGCCTACGAAAATCTTGCAATGTATTGAAtt < 1:375326/71‑1 (MQ=255) gcTAACCATGCGAGCGTGCCTGATGCGCTACGCTTATCAGGCCTACGAAAATCTTACAATGTATTGAAtt < 1:1864569/70‑1 (MQ=255) tgacaaacacagaatTGCCTGATGCGCTACGCTTATc < 1:1157290‑M2/22‑1 (MQ=255) cTAACCATGCGAGCGTGCCTGATGCGCTACGCTTATCAGGCCTACGa < 1:428851/47‑1 (MQ=255) cATGCGAGCGTGCCTGCTGCGCTACGCGTATCAGGCCt > 1:340354/1‑38 (MQ=17) tGCGAGCGTGCCTGATGCGCTACGCTTATCAGGCCTACGAAAATCTTGCAATGTATTGAATTTTCATGAtt < 1:823331/71‑1 (MQ=255) cGAGCGTGCCTGATGCGCTACGCTTATCAGGCCTACGAAAATCTTGCAATGTATTGAATTTTCATGAtttt < 1:3652626/71‑1 (MQ=255) gAGCGTGCCTGATGCGCTACGCTTATCAGGCCTACGAAAATCTTGc < 1:3486128/46‑1 (MQ=255) gAGCGTGCCTGATGCGCTACGCTTATCAGGCCTACGAAAATCTTGc < 1:2781709/46‑1 (MQ=255) gAGCGTGCCTGATGCGCTACGCTTATCAGGCCTACGAAAATCTTGc < 1:2517947/46‑1 (MQ=255) gAGCGTGCCTGATGCGCTACGCTTATCAGGCCTACGAAAATCTTGc < 1:3490398/46‑1 (MQ=255) gAGCGTGCCTGATGCGCTACGCTTATCAGGCCTACGAAAATCTTGCAATGTATTGAATTTTCATGATTTTg < 1:3053869/71‑1 (MQ=255) aGCGTGCCTGATGCGCTACGCTTATCAGGCCTACGAAAATCTTGCAATGTATTGAATTTTCATGATTTTg < 1:3550501/70‑1 (MQ=255) aGCGTGCCTGATGCGCTACGCTTATCAGGCCTACGAAAATCTTGCAATGTATTGAATTTTCATGATTTTg < 1:1184413/70‑1 (MQ=255) cGTGCCTGATGCGCTACGCTTATCAGGCCTACGAAAATCTTGCAATGTATTGAATTTTCATGATTTTg > 1:573606/1‑68 (MQ=255) tGCCTGATGCGCTACGCTTATCAGGCCTACGAAAATCTTGCAATGTa < 1:691713/47‑1 (MQ=255) tGCCTGATGCGCTACGCTTATCAGGCCTACGAAAATCTTGCAATGTATTGAATTTTCATGATTTTGTAGGc < 1:3405286/71‑1 (MQ=255) tGCCTGATGCGCTACGCTTATCAGGCCTACGAAAATCTTGCAATGTATTGAATTTTCATGATTTTGTAGGc < 1:2972154/71‑1 (MQ=255) | GTGCGTTTATTGAAGAGAACGCCCTGAAAGCGGCGAATATCGATATTTAATGGCGCTAACCATGCGAGCGTGCCTGATGCGCTACGCTTATCAGGCCTACGAAAATCTTGCAATGTATTGAATTTTCATGATTTTGTAGGC > minE/2493569‑2493709 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |