| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | = 589625 | 23 (0.390) | 4 (0.080) | 3/88 | NT | 14.1% | coding (332/495 nt) | lrp | DNA‑binding transcriptional dual regulator, leucine‑binding |
| ? | minE | = 589656 | 29 (0.570) | coding (363/495 nt) | lrp | DNA‑binding transcriptional dual regulator, leucine‑binding | |||||
ACTTGAAGAAATTCAGGAGTGTCATTTAGTATCCGGTGATTTCGACTACCTGTTGAAAACACGCGTGCCGGATATGTCAGCCTACCGTAAGTTGCTGGGGGAAACCCTGCTGCGTCTGCCTGGCGTCAATGACAC > minE/589590‑589724 | aCTTGAAGAAATTCAGGAGTGTCATTTAGTATCCGGTGATTTCGACTACCTGTTGAAAACACGCGTGccgg > 1:2326715‑M2/1‑67 (MQ=255) agaaATTCAGGAGTGTCATTTAGTATCCGGTGATTTCGTCTACCTGTTGAAAACACGCGTGCCGGATATGt < 1:3567198/71‑1 (MQ=255) gaaATTCAGGAGTGTCATTTAGTATCCGGTGATTTCGACTACCTGTTGAAAACACGCGTGCCGGATATGt > 1:1950868/1‑70 (MQ=255) gaaATTCAGGAGTGTCATTTAGTATCCGGTGATTTCGACTACCTGTTGAAAACACGCGTGCCGGATATGt > 1:1542465/1‑70 (MQ=255) aTTCAGGAGTGTCATTTAGTATCCGGTGATTTCGACTACCTGTTGAAAACACGCGTGccg > 1:1433019‑M2/1‑57 (MQ=255) aTTCAGGAGTGTCATTTAGTATCCGGTGATTTCGACTACCTGTTGAAAACACGCGTGccg > 1:3236774‑M2/1‑57 (MQ=255) cAGGAGTGTCATTTAGTATCCGGTGATTTCGACTACCTGTTGAAAACACGCGTGCCGGATATGTCAGCCTa > 1:146326/1‑71 (MQ=255) cAGGAGTGTCATTTAGTATCCGGTGATTTCGACTACCTGTTGAAAACACGCGTGCCGGATATGTCAGCCTa > 1:1663952/1‑71 (MQ=255) aGGAGTGTCATTTAGTATCCGGTGATTTCGACTACCTGTTGAAAACACGCGTGCCGGATATGTCAGCCTa < 1:142703/70‑1 (MQ=255) aGTGTCATTTAGTATCCGGTGATTTCGACTACCTGTTGAAAACACGCGTGCCGGATATGTCAGCCTACCGt < 1:381525/71‑1 (MQ=255) gtgtCATTTAGTATCCGGTGATTTCGACTACCTGTTGAAAACACGCGTGCCGGATATGTCAGCCTACCGTa < 1:3085289/71‑1 (MQ=255) tCATTTAGTATCCGGTGATTTCGACTACCTGTTGTAAACACGCGTGCCGGATATGTCAGCCTACCGTAAGt < 1:1350649/71‑1 (MQ=255) tttAGTATCCGGTGATTTCGACTACCTGTTGAAAACACGCGTGCCGGATATGTCAGCCTACCGTAAGTTGc < 1:88176/71‑1 (MQ=255) tAGTATCCGGTGATTTCGACTACCTGTTGAAAACACGCGTGccggatactaaatgacactcctgaatttct < 1:3003100‑M2/71‑31 (MQ=255) tAGTATCCGGTGATTTCGACTACCTGTTGAAAACACGCGTGccggatactaaatgacactcctgaatttct < 1:2800021‑M2/71‑31 (MQ=255) tAGTATCCGGTGATTTCGACTACCTGTTGAAAACACGCGTGCCGGATATGTCAGCCTACCGTAAGTTGCt < 1:307957/70‑1 (MQ=255) tATCCGGTGATTTCGACTACCTGTTGAAAACACGCGTGCCGGATATGTCAGCCTACCGTAAGTTGCTgggg < 1:865876/71‑1 (MQ=255) cGGTGATTTCGACTACCTGTTGAAAACACGCGTGCCGGATATGTc < 1:790851/45‑1 (MQ=255) cGGTGATTTCGACTACCTGTTGAAAACACGCGTGCCGGATATGTCa > 1:1256519/1‑46 (MQ=255) cGGTGATTTCGACTACCTGTTGAAAACACGCGTGCCGGATATGTCa > 1:39480/1‑46 (MQ=255) cGGTGATTTCGACTACCTGTTGAAAACACGCGTGCCGGATATGTCa > 1:440830/1‑46 (MQ=255) cGGTGATTTCGACTACCTGTTGAAAACACGCGTGCCGGATATGTCAGCCTACCGTAAGTTGCTGGGGGaaa < 1:310106/71‑1 (MQ=255) cGGTGATTTCGACTACCTGTTGAAAACACGCGTGCCGGATATGTCAGCCTACCGTAAGTTGCTGGGGGaa < 1:2278591/70‑1 (MQ=255) gTGATTTCGACTACCTGTTGAAAACACGCGTGCCGGATATGTCAGCCTACCGTAAGTTGCTGGGGGAAAcc < 1:1340865/71‑1 (MQ=255) aTTTCGACTACCTGTTGAAAACACGCGTGCCGGATATGTCAGCCTACCGTAAGTTGCTGGGGGaa < 1:1626561/65‑1 (MQ=255) aTTTCGACTACCTGTTGAAAACACGAGTGCCGGATATGTCAGCCTACCGTAAGTTGCTGGGGGAAACCct < 1:1579297/70‑1 (MQ=255) tCGACTACCTGTTGAAAACACGCGTGCCGGATATGTCAGCCTACCGTAAGTTGCTGGGGGAAACCctgctg > 1:1714456/1‑71 (MQ=255) aCTACCTGTTGAAAACACGCGTGCCGGATATGTCAGCCTACCGTAAGTTGc < 1:2053036/51‑1 (MQ=255) aCTACCTGTTGAAAACACGAGTGCCGGATATGTCAGCCTACCGTAAGTTGCTGGGGGAAACCCTGCTGCGt < 1:3401904/71‑1 (MQ=255) cTACCTGTTGAAAACACGCGTGCCGGATATGTCAGCCTACCGTAAGTTGCTGGGGGAAACCCTGCTGCGTc > 1:1801281/1‑71 (MQ=255) tACCTGTTGAAAACACGCGTGccggatactaaatgacac > 1:3361529‑M2/1‑21 (MQ=255) tACCTGTTGAAAACACGCGTGCCGGATATGTCAGCCTACCGTAAGTTGCTGGGGGAAACCCTGCTGCGTCt > 1:2109470/1‑71 (MQ=255) tACCTGTTGAAAACACGCGTGCCGGATATGTCAGCCTACCGTAAGTTGCTGGGGGAAACCCTGCTGCGTCt > 1:2063503/1‑71 (MQ=255) ccTGTTGAAAACAAGCGTGccggatactaaatgacactc < 1:1595782‑M2/39‑21 (MQ=255) cTGTTGAAAACACGCGTGCCGGATATGTCAGCCTACCGTAAGTTGCTgg > 1:2469716/1‑49 (MQ=255) gTTGAAAACACGCGTGCCGGATATGTCAGCCTACCGTAAGt > 1:116104/1‑41 (MQ=255) ttGTAAACACGCGTGCCGGATATGTCAGCCTACCGTAAGTTGCTgg < 1:1441847/46‑1 (MQ=255) ttGAAAACACGCGTGCCGGATATGTCAGCCTACCGTAAGTTGCTGGGGGAAACCCTGCTGCGTCTGCCt < 1:2251438/69‑1 (MQ=255) gAAAACACGCGTGCCGGATATGTCAGCCTACCGTAAGTTGCTGGGGGAAACCCTGCTGCGTCTGCCTGGCg > 1:725994/1‑71 (MQ=255) aaaCACGCGTGCCGGATATGTCAGCCTACCGTAAGTTGCTGGGGGAAAccc > 1:2589955/1‑51 (MQ=255) cacGCGTGCCGGATATGTCAGCCTACCGTAAGTTGCTGGGGGAAACCCTGCTGCGTCTGCCTGGCGTCAAt < 1:832558/71‑1 (MQ=255) acGCGTGCCGGATATGTCAGCCTACCGTAAGTTGCTGGGGGAAACCCTGCTGCGTCTGCCTGGCGTCa < 1:557228/68‑1 (MQ=255) acGCGTGCCGGATATGTCAGCCTACCGTAAGTTGCTGGGGGAAACCCTGCTGCGTCTGCCTGGCGTCa < 1:996446/68‑1 (MQ=255) gcgTGCCGGATATGTCAGCCTACCGTAAGTTGCTGGGGGAAACCCTGCTGCGTCTGCCTGGCGTCAATGa > 1:3598422/1‑70 (MQ=255) gcgTGCCGGATATGTCAGCCTACCGTAAGTTGCTGGGGGAAACCCTGCTGCGTCTGCCTGGCGTCAATGa > 1:3509718/1‑70 (MQ=255) gcgTGCCGGATATGTCAGCCTACCGTAAGTTGCTGGGGGAAACCCTGCTGCGTCTGCCTGGCGTCAATGa > 1:2303879/1‑70 (MQ=255) gTGCCGGATATGTCAGCCTACCGTAAGTTGCTGGGGGAAACCCTGCTGCGTCTGCCTGGCGTCAATGacac < 1:960385/71‑1 (MQ=255) | ACTTGAAGAAATTCAGGAGTGTCATTTAGTATCCGGTGATTTCGACTACCTGTTGAAAACACGCGTGCCGGATATGTCAGCCTACCGTAAGTTGCTGGGGGAAACCCTGCTGCGTCTGCCTGGCGTCAATGACAC > minE/589590‑589724 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |