| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | = 723645 | 82 (1.390) | 5 (0.090) | 3/94 | NT | 6.1% | intergenic (‑23/‑112) | rne/yceQ | fused ribonucleaseE endoribonuclease and scaffold for formation of degradosome/hypothetical protein |
| ? | minE | = 723669 | 79 (1.450) | intergenic (‑47/‑88) | rne/yceQ | fused ribonucleaseE endoribonuclease and scaffold for formation of degradosome/hypothetical protein | |||||
TTGATTAACATTCTTTTCATCGTAACTTACTCATTATTCTTACATTGACGACTAAGCTGCGGGCAAAGTAACGCCTTTCCGGGTGTGAACCGATGGCCTCGTGTCTAGTCGCGTCGCCAACCTCACGGTTATCGT > minE/723603‑723737 | ttGATTAACATTCTTTTCATCGTAACTTACTCATTATTCTTACATTGACGACTAAGCTGCGGGCAAAgta > 1:417750‑M2/1‑67 (MQ=255) gATTAACATTCTTTTCATCGTAACTTACTCATTATTCTTACATTGACGACTAAGCTGCGGGCAAAGTAAc < 1:1881740/70‑1 (MQ=255) gATTAACATTCTTTTCATCGTAACTTACTCATTATTCTTACATTGACGACTAAGCTGCGGGCAAAGTAAc < 1:1298421/70‑1 (MQ=255) gATTAACATTCTTTTCATCGTAACTTACTCATTATTCTTACATTGACGACTAAGCTGCGGGCAAAGTAACg > 1:1242590/1‑71 (MQ=255) aTTAACATTCTTTTCATCGTAACTTACTCATTATTCTTACATTGACGACTAAGCTGCGGGCAAAGTAACGc > 1:239219/1‑71 (MQ=255) tAACATTCTTTTCATCGTAACTTACTCATTATTCTTACATTGACGACTAAGCTGCGGGCAAAGTAACGCCt > 1:2319700/1‑71 (MQ=255) aCATTCTTTTCATCGTAACTTACTCATTATTCTTACATTGACGACTAAGCTGCGGGCAAAGTAACGCCttt > 1:558352/1‑71 (MQ=255) cATTCTTTTCATCGTAACTTACTCATTATTCTTACATTGACGACTAAGCTGCGGGCAAAGTAACGCCTTTc < 1:2211826/71‑1 (MQ=255) ttCTTTTCATCGTAACTTACTCATTATTCTTACATTGACGACTAAGCTGCGGGCAAAGTAACGCCTTTCCg > 1:1904565/1‑71 (MQ=255) ttCTTTTCATCGTAACTTACTCATTATTCTTACATTGACGACTAAGCTGCGGGCAAAGTAACGCCTATCCg > 1:166722/1‑71 (MQ=255) tCTTTTCATCGTAACTTACTCATTATTCTTACATTGACGACTAAGCTGCGGGCAAAgt > 1:542052‑M2/1‑56 (MQ=255) cTTTTCATCGTAACTTACTCATTATTCTTACATTGACGACTAAGCTGCGGGCAAAGTAACGCCTTTCCgg < 1:2257983/70‑1 (MQ=255) cTTTTCATCGTAACTTACTCATTATTCTTACATTGACGACTAAGCTGCGGGCAAAGTAACGCCTTTCCgg < 1:2986854/70‑1 (MQ=255) cTTTTCATCGTAACTTACTCATTATTCTTACATTGACGACTAAGCTGCGGGCAAAGTAAAGCCTTTCCgg < 1:2097159/70‑1 (MQ=255) ttttCATCGTAACTTACTCATTATTCTTACATTGACGACTAAGCTGCGGGCAAAgtaa < 1:2742170‑M2/58‑5 (MQ=255) ttttCATCGTAACTTACTCATTATTCTTACATTGACGACTAAGCTGCGGGCAAAgtaa < 1:3663952‑M2/58‑5 (MQ=255) ttCATCGTAACTTACTCATTATTCTTACATTGACGACTAAGCTGCGGGCAAAGTAACGCCTTTCCggg < 1:878158/68‑1 (MQ=255) tCATCGTAACTTACTCATTATTCTTACATTGACGACTAAGCTGCGGGCAAAGTAACGCCTTTCCGGgtgt < 1:586254/70‑1 (MQ=255) cATCGTAACTTACTCATTATTCTTACATTGACGACTAAGCTTCGGGCAAAgt > 1:2970995‑M2/1‑50 (MQ=255) cATCGTAACTTACTCATTATTCTTACATTGACGACTAAGCTGCGGGCAAAGTAACGCCTTTCCGGGtgtg < 1:1739372/70‑1 (MQ=255) cATCGTAACTTACTCATTATTCTTACATTGACGACTAAGCTGCGGGCAAAGTAACGCCTTTCCGGGtgtg < 1:3658913/70‑1 (MQ=255) tCGTAACTTACTCATTATTCTTACATTGACGACTAAGCTGCGGGCAAAGTAACGCCTTTCCGGGTGTGAAc > 1:2563427/1‑71 (MQ=255) gTAACTTACTCATTATTCTTGCATTGACGACTAAGCTGCGGGCAAAGTAACGCCTTTCCGGgt > 1:3322672/1‑63 (MQ=255) gTAACTTACTCATTATTCTTACATTGACGACTAAGCTGCGGGCAAAGTAACGCCTTTCCgg < 1:3595882/61‑1 (MQ=255) gTAACTTACTCATTATTCTTACATTGACGACTAAGCTGCGGGCAAAGTAACGCCTTTCCGGgt > 1:3312923/1‑63 (MQ=255) gTAACTTACTCATTATTCTTACATTGACGACTAAGCTGCGGGCAAAGTAACGCCTTTCCGGgt > 1:1243194/1‑63 (MQ=255) gTAACTTACTCATTATTCTTACATTGACGACTAAGCTGCGGGCAAAGTAACGCCTTTCCGGGTGTGAAcc > 1:579577/1‑70 (MQ=255) gTAACTTACTCATTATTCTTACATTGACGACTAAGCTGCGGGCAAAGTAACGCCTTTCCGGGTGTGAAcc > 1:2256628/1‑70 (MQ=255) gTAACTTACTCATTATTCTTACATTGACGACTAAGCTGCGGGCAAAGTAACGCCTTTCCGGGTGTGAAcc > 1:641406/1‑70 (MQ=255) gTAACTTACTCATTATTCTTACATTGACGACTAAGCTGCGGGCAAAGTAACGCCTTTCCGGGTGTGAACCg < 1:3718314/71‑1 (MQ=255) tAACTTACTCATTATTCTTACATTGACGACTAAGCTGCGGGCAAAGTAACGCCTTTCCGGGTGTGAACCGa < 1:2865852/71‑1 (MQ=255) aCTTACTCATTATTCTTACATTGACGACTAAGCTGCGGGCAAAGTAACGCCTTTCCGGGTGTGAACCGAt < 1:3091915/70‑1 (MQ=255) cTTACTCATTATTCTTACATTGACGACTAAGCTGCGGGCAAAGTAACGCCTTTCCGGGTGTGAACCGAt < 1:3140049/69‑1 (MQ=255) ttACTCATTATTCTTACATTGACGACTAAGCTGCGGGCAAAGTAACGCCTTTCCGGGTGTGAACCGATg < 1:2851167/69‑1 (MQ=255) ttACTCATTATTCTTACATTGACGACTAAGCTGCGGGCAAAGTAACGCCTTTCCGGGTGTGAACCGATg < 1:1114966/69‑1 (MQ=255) ttACTCATTATTCTTACATTGACGACTAAGCTGCGGGCAAAGTAACGCCTTTCCGGGTGTGAACCGATg < 1:2280505/69‑1 (MQ=255) tACTCATTATTCTTACATTGACGACTAAGCTGCGGGCAAAGTAACGCCTTTCCGGGTGTGAACCGa > 1:1340210/1‑66 (MQ=255) tACTCATTATTCTTACATTGACGACTAAGCTGCGGGCAAAGTAACGCCTTTCCGGGTGTGAACCGa > 1:148975/1‑66 (MQ=255) tACTCATTATTCTTACATTGACGACTAAGCTGCGGGCAAAGTAACGCCTTTCCGGGTGTGAACCGa > 1:2100508/1‑66 (MQ=255) tACTCATTATTCTTACATTGACGACTAAGCTGCGGGCAAAGTAACGCCTTTCCGGGTGTGAACCGa > 1:3211687/1‑66 (MQ=255) aCTCATTATTCTTACATTGACGACTAAGCTGCGGGCAAAGTAACGcc > 1:1801815/1‑47 (MQ=255) aCTCATTATTCTTACATTGACGACTAAGCTGCGGGCAAAGTAACGCCTTTCCGGGTGTGAACCg > 1:321288/1‑64 (MQ=255) aCTCATTATTCTTACATTGACGACTAAGCTGCGGGCAAAGTAACGCCTTTCCGGGTGTGAACCg > 1:1293137/1‑64 (MQ=255) aCTCATTATTCTTACATTGACGACTAAGCTGCGGGCAAAGTAACGCCTTTCCGGGTGTGAACCGATTGcc < 1:3199042/70‑1 (MQ=255) cTCATTATTCTTACATTGACGACTAAGCTGCGGGCAAAGTAACGCCTTTCCGGGTGTGAACCGATGGCCTc < 1:1679289/71‑1 (MQ=255) tCATTATTCTTACATTGACGACTAAGCTGCGGGCAAAGTAACGCCTTTCCGGGTGTGAACCGATGGCCTCg > 1:3616514/1‑71 (MQ=255) attattCTTACATTGACGACTAAGCTGCGGGCAAAGTAACGCCTTTCCGGGTGTGAACCg < 1:2967458/60‑1 (MQ=255) attattCTTACATTGACGACTAAGCTGCGGGCAAAGTAACGCCTTTCCGGGTGTGAACCg < 1:2679907/60‑1 (MQ=255) attattCTTACATTGACGACTAAGCTGCGGGCAAAGTAACGCCTTTCCGGGTGTGAACCg < 1:2271469/60‑1 (MQ=255) attattCTTACATTGACGACTAAGCTGCGGGCAAAGTAACGCCTTTCCGGGTGTGAACCGATGGCCTCgtg > 1:757991/1‑71 (MQ=255) ttattCTTACATTGACGACTAAGCTGCGGGCAAAGTAACGCCTTTCCGGGTGTGAACCg < 1:1771130/59‑1 (MQ=255) tCTTACATTGACGACTAAGCTGCGGGCAAAGTAACGCCTTTCCggg < 1:3118244/46‑1 (MQ=255) tCTTACATTGACGACTAAGCTGCGGGCAAAGTAACGCCTTTCCggg < 1:2658456/46‑1 (MQ=255) cTTACATTGACGACTAAGCTGCGGGCAAAGTAACGCCTTTCCGGGTGTGAACCGATGGCCTCGTGTCTAgt > 1:3414107/1‑71 (MQ=255) ttACATTGACGACTAAGCTGCGGGCAAAGTAACGCCTTTCCGGGTGTGAAcc < 1:943174/52‑1 (MQ=255) ttACATTGACGACTAAGCTGCGGGCAAAGTAACGCCTTTCCGGGTGTGAAcc < 1:2168640/52‑1 (MQ=255) ttACATTGACGACTAAGCTGCGGGCAAAGTAACGCCTTTCCGGGTGTGAAcc < 1:2517090/52‑1 (MQ=255) tACATTGACGACTAAGCTGCGGGCAAAGTAACGCCTTTCCGGGTGTGAACCg < 1:2579780/52‑1 (MQ=255) aCATTGACGACTAAGCTGCGGGCAAAgtaagaataatgagtaagttacgatgaaaagaatgttaatcaac < 1:1041160‑M2/70‑45 (MQ=255) aCATTGACGACTAAGCTGCGGGCAAAGTAACGCCTTTCCGGgtgt > 1:3360222/1‑45 (MQ=255) aCATTGACGACTAAGCTGCGGGCAAAGTAACGCCTTTCCGGGTGTGAACCGATGGCCTCGTGTCTAgtcgc > 1:1211677/1‑71 (MQ=255) aCATTGACGACTAAGCTGCGGGCAAAGTAACGCCTTTCCGGGTGTGAACCGATGGCCTCGTGTCTAgtc < 1:2815518/69‑1 (MQ=255) aCATTGACGACTAAGCTGCGGGCAAAGTAACGCCTTTCCGGGTGTGAACCGATGGCCTCGTGTCTAgtc < 1:242953/69‑1 (MQ=255) cATTGACGACTAAGCTGCGGGCAACGTAACGCCTTTCCGGGTGTGAACCGATGGCCTCGTGTCTAgtcgc < 1:3541863/70‑1 (MQ=255) cATTGACGACTAAGCTGCGGGCAAAgtaagaataatgagtaagttacgatgaaaagaatgttaatcaacg < 1:3480870‑M2/70‑46 (MQ=255) ttGACGACTAAGCTGCGGGCAAAgtaagaataatgagtaagttacgatgaaaagaatgtta > 1:2563164‑M2/1‑23 (MQ=255) ttGACGACTAAGCTGCGGGCAAAgtaagaataatgagtaagttacgatgaaaagaatgtta > 1:654543‑M2/1‑23 (MQ=255) ttGACGACTAAGCTGCGGGCAAAgtaagaataatgagtaagttacgatgaaaagaatgtta > 1:3713554‑M2/1‑23 (MQ=255) ttGACGACTAAGCTGCGGGCAAAGTAACGCCTTTCCGGGTGTGAACCGATGGCCTCGTGTCTAgtcgcgtc < 1:1567390/71‑1 (MQ=255) ttGACGACTAAGCTGCGGGCAAAGTAACGCCTTTCCGGGTGTGAACCGATGGCCTCGTGTCTAgtcgcgtc < 1:3474870/71‑1 (MQ=255) acgacTAAGCTGCGGGCAAAGTAACGCCTTTCCGGGTGTGAACCGATGGCCTCTTGTc < 1:336966/58‑1 (MQ=255) acgacTAAGCTGCGGGCAAAGTAACGCCTTTCCGGGTGTGAACCGATGGCCTCGTGTCTAgtcgcgtcgc < 1:1974410/70‑1 (MQ=255) acgacTAAGCTGCGGGCAAAGTAACGCCTTTCCGGGTGTGAACCGATGGCCTCGTGTCTAgtcgcgtcgc < 1:842390/70‑1 (MQ=255) acgacTAAGCTGCGGGCAAAGTAACGCCTTTCCGGGTGTGAACCGATGGCCTCGTGTCTAgtcgcgtcgc < 1:785578/70‑1 (MQ=255) acgacTAAGCTGCGGGCAAAGTAACGCCTTTCCGGGTGTGAACCGATGGCCTCGTGTCTAGTCGCGTCGcc < 1:2856446/71‑1 (MQ=255) acgacTAAGCTGCGGGCAAAGTAACGCCTTTCCGGGTGTGAACCGATGGCCTCGTGTCTAGTCGCGTCGcc < 1:3723176/71‑1 (MQ=255) acgacTAAGCTGCGGGCAAAGTAACGCCTTTCCGGGTGTGAACCGATGGCCTCGTGTCTAGTCGAGTCGcc < 1:1685893/71‑1 (MQ=255) gacTAAGCTGCGGGCAAAGTAACGCCTTTCCGGGTGTGAACCGATgg < 1:1296725/47‑1 (MQ=255) gacTAAGCTGCGGGCAAAGTAACGCCTTTCCGGGTGTGAACCGATGGCCTCGTGTCt < 1:2330559/57‑1 (MQ=255) tAAGCTGCGGGCAAAGTAACGCCTTTCCGGGTGTGa < 1:3268322/36‑1 (MQ=255) aaGCTGCGGGCAAAGTAACGCCTTTCCGGGTGTGAACCGATGGCCTCGTGTCTAGTCGCGTCGCCAACCt > 1:931353/1‑70 (MQ=255) aaGCTGCGGGCAAAGTAACGCCTTTCCGGGTGTGAACCGATGGCCTCGTGTCTAGTCGCGTCGCCAACCt > 1:2133490/1‑70 (MQ=255) aaGCTGCGGGCAAAGTAACGCCTTTCCGGGTGTGAACCGATGGCCTCGTGTCTAGTCGCGTCGCCAACCt > 1:1784335/1‑70 (MQ=255) atcTGCGGGCAAAGTAACGCCTTTCCGGGTGTGAACCGATGGCCTCGTGTCTAGTCGCGTCGCCAACCTCa < 1:234863/69‑1 (MQ=255) aGCTGCGGGCAAAGTAACGCCTTTCCGGGTGTGAACCGATGGCCTCGTGTc < 1:1575031/51‑1 (MQ=255) aGCTGCGGGCAAAGTAACGCCTTTCCGGGTGTGAACCGATGGCCTCGTGTCTAGTCGCGTCGCCAACCt < 1:669913/69‑1 (MQ=255) aGCTGCGGGCAAAGTAACGCCTTTCCGGGTGTGAACCGATGGCCTCGTGTCTAGTCGCGTCGCCAACCTCa < 1:2856749/71‑1 (MQ=255) aGCTGCGGGCAAAGTAACGCCTTTCCGGGTGTGAACCGATGGCCTCGTGTCTAGTCGCGTCGCCAACCTCa < 1:1317484/71‑1 (MQ=255) tGCGGGCAAAGTAACGCCTTTCCGGGTGTGAACCGATGGCCTCGTGTCTAGTCGCGTCGCCAACCTCACgg > 1:2630664/1‑71 (MQ=255) cGGGCAAAGTAACGCCTTTCCGGGTGTGAACCGATGGCCTCGTGTCTAGTCGCGTCGCCAAc > 1:3714429/1‑62 (MQ=255) cGGGCAAAGTAACGCCTTTCCGGGTGTGAACCGATGGCCTCGTGTCTAGTCGCGTCGCCAACCTCACGGtt < 1:3693478/71‑1 (MQ=255) cGGGCAAAGTAACGCCTTTCCGGGTGTGAACCGATGGCCTCGTGTCTAGTCGCGTCGCCAACCTCACGGtt < 1:2346492/71‑1 (MQ=255) gggCAAAGTAACGCCTTTCCGGGTGTGAACCGATGGCCTCGTGTCTAGTCGCGTCGCCAACCTCACGGTTa > 1:1751441/1‑71 (MQ=255) ggCAAAGTAACGCCTTTCCGGGTGTGAACCGATGGCCTCGTGTCTAGTCGCGTCGCCAACCTCACGGTTAt < 1:3022814/71‑1 (MQ=255) ggCAAAGTAACGCCTTTCCGGGTGTGAACCGATGGCCTCGTGTCTAGTCGCGTCGCCAACCTCACGGTTAt < 1:2282662/71‑1 (MQ=255) cAAAGTAACGCCTTTCCGGGTGTGAACCGATGGCCTCGTGTCTAg < 1:3208597/45‑1 (MQ=255) aaaGTAACGCCTTTCCGGGTGTGAACCGATGGCCTCGTGTCTAGTCGCGTCGCCAACCTCACGGTTATCg > 1:1563972/1‑70 (MQ=255) aGTAACGCCTTTCCGGGTGTGAACCGATGGCCTCGTGTCTAGTCGCGTCGCCAACCTCACGGTTATCGt > 1:3160005/1‑69 (MQ=255) aGTAACGCCTTTCCGGGTGTGAACCGATGGCCTCGTGTCTAGTCGCGTCGCCAACCTCACGGTTATCGt > 1:3155651/1‑69 (MQ=255) | TTGATTAACATTCTTTTCATCGTAACTTACTCATTATTCTTACATTGACGACTAAGCTGCGGGCAAAGTAACGCCTTTCCGGGTGTGAACCGATGGCCTCGTGTCTAGTCGCGTCGCCAACCTCACGGTTATCGT > minE/723603‑723737 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |