| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | 812571 = | 41 (0.700) | 3 (0.060) | 3/94 | NT | 7.2% | coding (447/1680 nt) | ychM | predicted transporter |
| ? | minE | 812595 = | 39 (0.720) | coding (423/1680 nt) | ychM | predicted transporter | |||||
CGGGACATGGGCCATTTGCAGACCGAGAAAATCTTTAATCTGCATGGTACCGATGGTGATCCCGATACCCGAGGTGAAACCTAAGGTGACGGAAACCGGAATATACTCAATCAGGCGACCAAAGCGTGCCAGACCC > minE/812526‑812661 | cGGGACATGGGCCATTTGCAGACCGAGAAAATCTTTAATCTGCATGGTACCGATGGTGATCACGATAccc < 1:1019995/70‑1 (MQ=255) gggACATGGGCCATTTGCAGACCGAGAAAATCTTTAATCTGCATGGTACCGATGGTGATCCCGATACCCGa < 1:3076499/71‑1 (MQ=255) aCATGGGCCATTTGCAGACCGAGAAAATCTTTAATCTGCATGGTACCGATGGTGATCCCGATACCCGa > 1:891664/1‑68 (MQ=255) aCATGGGCCATTTGCAGACCGAGAAAATCTTTAATCTGCATGGTACCGATGGTGATCCCGATACCCGa > 1:816950/1‑68 (MQ=255) aCATGGGCCATTTGCAGACCGAGAAAATCTTTAATCTGCATGGTACCGATGGTGATCCCGATACCCGAGGt < 1:2611272/71‑1 (MQ=255) cATGGGCCATTTGCAGACCGAGAAAATCTTTAATCTGCATGGTACCGATGGTGATCCCGATACCCGAGGTg < 1:3009340/71‑1 (MQ=255) gtatattccggtttccgtcaccttaggtttcacctcgGGTACCGATGGTGATCCCGATACCCGa > 1:1686215‑M1/38‑64 (MQ=255) gCCATTTGCAGACCGAGAAAATCTTTAATCTGCATGGTACCGATGGTGATCCCGATACCCGAGGTGAAAcc < 1:2265150/71‑1 (MQ=255) atattccggtttccgtcaccttaggtttcacctcgGGTACCGATGGTGATCCCGATACCCGAgg < 1:3249160‑M1/29‑1 (MQ=255) ccATTTGCAGACCGAGAAAATCTTTAATCTGCATGGTACCGATGGTGATCCCGATACCCGAGGTGAAACCt < 1:913439/71‑1 (MQ=255) cATTTGCAGACCGAGAAAATCTTTAATCTGCATGGTACCGATGGTGATCCCGATACCCGAGGTGAAACCTa < 1:2125568/71‑1 (MQ=255) tttGCAGACCGAGAAAATCTTTAATCTGCATGGTACCGATGGTGATCCCGATACCCGAGGTGAAACCTAAg > 1:3568352/1‑71 (MQ=255) tttGCAGACCGAGAAAATCTTTAATCTGCATGGTACCGATGGTGATCCCGATACCCGAGGTGAAACCTAAg > 1:2694288/1‑71 (MQ=255) ttGCAGACCGAGAAAATCTTTAATCTGCATGGTACCGATGGTGATCCCGATACCCGAGGTGAAACCTAAgg > 1:3507893/1‑71 (MQ=255) tGCAGACCGAGAAAATCTTTAATCTGCATGGTACCGATGGTGATCCCGATACCCGAGGTGAAACCTa > 1:1874287/1‑67 (MQ=255) tGCAGACCGAGAAAATCTTTAATCTGCATGGTACCGATGGTGATCCCGATACCCGAGGTGAAACCTa > 1:1278458/1‑67 (MQ=255) gCAGACCGAGAAAATCTTTAATCTGCATGGTACCGATGGTGATCCCGATACCCGAGGTGAAACCTAAGGt < 1:3198210/70‑1 (MQ=255) gCAGACCGAGAAAATCTTTAATCTGCATGGTACCGATGGTGATCCCGATACCCGAGGTGAAACCTAAGGt < 1:2333908/70‑1 (MQ=255) cAGACCGAGAAAATCTTTAATCTGCATGGTACCGGTGGTGATCCCGATACCCGAGGTGAAACCTAAGGTGa < 1:595543/71‑1 (MQ=255) cAGACCGAGAAAATCTTTAATCTGCATGGTACCGATGGTGATCCCGATACCCGAGGTGAAACCTAAGGTg < 1:975202/70‑1 (MQ=255) cAGACCGAGAAAATCTTTAATCTGCATGGTACCGATGGTGATCCCGATACCCGAGGTGAAACCTAAGGTGa < 1:2992192/71‑1 (MQ=255) ccGAGAAAATCTTTAATCTGCATGGTACCGATGGTGATCCCGATACCCGAGGTGAAACCTAAGGTGACGGa < 1:924450/71‑1 (MQ=255) ccGAGAAAATCTTTAATCTGCATGGTACCGATGGTGATCCCGATACCCGAGGTGAAACCTAAGGTGACGGa < 1:3558038/71‑1 (MQ=255) cGAGAAAATCTTTAATCTGCATGGTACCGATGGTGATCCCGATACCCGAGGTGAAACCTAAg > 1:2255419/1‑62 (MQ=255) cGAGAAAATCTTTAATCTGCATGGTACCGATGGTGATCCCGATACCCGAGGTGAAACCTAAGGTGACGGa > 1:19212/1‑70 (MQ=255) aTCTTTAATCTGCATGGTACCGATGGTGATCCCGATACCCGAGGTGAAACCTAAGGTGACGGAAACCGGaa > 1:2740335/1‑71 (MQ=255) aTCTTTAATCTGCATGGTACCGATGGTGATCCCGATACCCGAGGTGAAACCTAAGGTGACGGAAACCGGa > 1:1046720/1‑70 (MQ=255) tCTTTAATCTGCATGGTACCGATGGTGATCCCGATACCCGAGGTGAAACCTAAGGTGACGGAAACCGGaa > 1:1939975/1‑70 (MQ=255) tCTGCATGGTACCGATGGTGGTCCCGATACCCGAGGTGAAACCTAAGGTGACGGAAACCGGAATATACTc > 1:1578796/1‑70 (MQ=255) tCTGCATGGTACCGATGGTGATCCCGATACCCGAGGTGAAACCTAAGGTGACGGAAACCGGAATATACTc > 1:2131331/1‑70 (MQ=255) tCTGCATGGTACCGATGGTGATCCCGATACCCGAGGTGAAACCTAAGGTGACGGAAACCGGAATATACTc > 1:83312/1‑70 (MQ=255) cctcgggtatcgggatcaccatcggtaccCGAGGTGAAACCTAAGGTGACGGAAACCGGAatat < 1:3249160‑M2/35‑1 (MQ=255) gCATGGTACCGATGGTGATCCCGATACCCGAGGTGAAACCTAAGGTGACGGAAACCGGAATATACTCAAt > 1:1047763/1‑70 (MQ=255) tcgggtatcgggatcaccatcggtaccCGAGGTGAAACCTAAGGTGACGGAAACCGGAATATAc > 1:1686215‑M2/28‑64 (MQ=255) cATGGTACCGATGGTGATCCCGATACCCGAGGTGAAACCTAAGGTGACGGAAACCGGAat < 1:233781/60‑1 (MQ=255) cATGGTACCGATGGTGATCCCGATACCCGAGGTGAAACCTAAGGTGACGGAAACCGGAat < 1:58935/60‑1 (MQ=255) cATGGTACCGATGGTGATCCCGATACCCGAGGTGAAACCTAAGGTGACGGAAACCGGAATATACTCa < 1:2764104/67‑1 (MQ=255) aTGGTACCGATGGTGATCCCGATACCCGAGGTGAAACCTAAGGTGACGGAAACCGGAATATACTCAATCAg < 1:2356624/71‑1 (MQ=255) atcgggatcaccatcggtaccCGAGGTGAAACCTAAGGTGACGGAAACCGGAATATACTCaa > 1:1942425‑M2/22‑62 (MQ=255) ACCGATGGTGATCCCGATACCCGAGGTGAAACCTAAGGTGACGGAAACCGGAATATACTCAATCAGGCGAc < 1:1626191‑M1/71‑1 (MQ=255) cGATGGTGATCCCGATACCCGAGGTGAAACCTAAGGTGACGGAAACCGGAatat < 1:391818/54‑1 (MQ=255) aTGGTGATCCCGATACCCGAGGTGAAACCTAAGGTGa > 1:2900842/1‑37 (MQ=255) aTGGTGATCCCGATACCCGAGGTGAAACCTAAGGTGACGGAAACCGGAATATACTCAATCAGGCGACCaaa < 1:1179296/71‑1 (MQ=255) tGGTGATCCCGATACCCGAGGTGAAACCTAAGGTGACGGAAACCGGAATATACTCAATCAGGCGACCAAAg < 1:2661382/71‑1 (MQ=255) gTGATCCCGATACCCGAGGTGAAACCTAAGGTGACGGAAACCGGAATATACTCAATCAGGCGACCAAAGc < 1:398731/70‑1 (MQ=255) tGATCCCGATACCCGAGGTGAAACCTAAGGTGACGGAAACCGGAATATACTCAATCAGGCGACCAAAGCGt > 1:533433/1‑71 (MQ=255) gATCCCGATACCCGAGGTGAAACCTAAGGTGACGGAAACCGGAATATACTCAATCAGGCGACCAAAGCGTg > 1:31907/1‑71 (MQ=255) aTCCCGATACCCGAGGTGAAACCTAAGGTGACGGAAACCGGAATATACTCAATCAGGCGAcc < 1:1736972/62‑1 (MQ=255) tCCCGATACCCGAGGTGAAACCTAAGGTGACGGAAACCGGAATATACTCTATCAGGCGACCAAAGCGTGcc < 1:625588/71‑1 (MQ=255) ccGATACCCGAGGTGAAACCTAAGGTGACGGAAACCGGAata < 1:1595073/42‑1 (MQ=255) cGATACCCGAGGTGAAACCTAAGGTGACGGAAACCGGAATATACTCAATCATGCGACCAAAg > 1:211500/1‑62 (MQ=255) gATACCCGAGGTGAAACCTAAGGTGACGGAAACCGGAATATACTCAATCAGGCGACCAAAGCGTGCCAGAc < 1:2656808/71‑1 (MQ=255) gATACCCGAGGTGAAACCTAAGGTGACGGAAACCGGAATATACTCAATCAGGCGACCAAAGCGTGCCAGAc < 1:3281074/71‑1 (MQ=255) gATACCCGAGGTGAAACCTAAGGTGACGGAAACCGGAATATACTCAATCAGGCGACCAAAGCGTGCCAGAc > 1:802254/1‑71 (MQ=255) taccCGAGGTGAAACCTAAGGGGACGGAAACCGGAATATACTCAATCAgg > 1:1821255‑M2/5‑50 (MQ=255) cCGAGGTGAAACCTAAGGTGACGGAAACCGGAATATACTCAATCAGGCGACCAAAGCGTGCCAGAccc < 1:2078227‑M2/67‑1 (MQ=255) | CGGGACATGGGCCATTTGCAGACCGAGAAAATCTTTAATCTGCATGGTACCGATGGTGATCCCGATACCCGAGGTGAAACCTAAGGTGACGGAAACCGGAATATACTCAATCAGGCGACCAAAGCGTGCCAGACCC > minE/812526‑812661 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |