| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | = 969609 | 52 (0.880) | 3 (0.060) | 3/84 | NT | 6.4% | intergenic (‑193/‑56) | ydeW/ego | predicted DNA‑binding transcriptional regulator/fused AI2 transporter subunits and ATP‑binding components of ABC superfamily |
| ? | minE | = 969624 | 45 (0.930) | intergenic (‑208/‑41) | ydeW/ego | predicted DNA‑binding transcriptional regulator/fused AI2 transporter subunits and ATP‑binding components of ABC superfamily | |||||
ATTGTGATCTATTCGTCGGAAATATGTGCAATGTCCACCTAAGGTTATGAACAAATTAAAAGCAGAAATACATTTGTTCAAAACTCACCTGCAAAACTGAACGGGGGAAATATGCAAACGAGTGATACCCGCGCGTTAC > minE/969554‑969692 | aTTGTGATCTATTCGTCGGAAATATGTGCAATGTCCACCTAAGGTTATGAACAAATTAAAAGCAGAAATAc < 1:384940/71‑1 (MQ=255) gtgATCTATTCGTCGGAAATATGTGCAATGTCCACCTAAGGTTATGAACAAATTAAAAGCATAAATACat > 1:3330375‑M2/1‑68 (MQ=255) gtgATCTATTCGTCGGAAATATGTGCAATGTCCACCTAAGGTTATGAACAAATTAAAAGCAGAAATACatt < 1:3651756‑M2/71‑4 (MQ=255) aTCTATTCGTCGGAAATATGTGCAATGTCCACCTAAGGTTATGAACAAATTAAAAGCAGAAATACatttg > 1:613090‑M2/1‑65 (MQ=255) ttCGTCGGAAATATGTGCAATGTCCACCTAAGGTTATGAACAAATTAAAAGCAGAAATACatttgttca > 1:2279742‑M2/1‑60 (MQ=255) ttCGTCGGAAATATGTGCAATGTCCACCTAAGGTTATGAACAAATTAAAAGCAGAAATACatttgttc > 1:434334‑M2/1‑60 (MQ=255) ttCGTCGGAAATATGTGCAATGTCCACCTAAGGTTATGAACAAATTAAAAGCAGAAATACatttgtt > 1:1153639‑M2/1‑60 (MQ=255) ttCGTCGGAAATATGTGCAATGTCCACCTAAGGTTATGAACAAATTAAAAGCAGAAATACATTTGTTCaa < 1:633377/70‑1 (MQ=255) ttCGTCGGAAATATGTGCAATGTCCACCTAAGGTTATGAACAAATTAAAAGCAGAAATACATTTGTTCaa < 1:1191082/70‑1 (MQ=255) ttCGTCGGAAATATGTGCAATGTCCACCTAAGGTTATGAACAAATTAAAAGCAGAAATACATTTGTTCaa < 1:3703977/70‑1 (MQ=255) ttCGTCGGAAATATGTGCAATGTCCACCTAAGGTTATGAACAAATTAAAAGCAGAAATACATTTGTTCaa > 1:2013980/1‑70 (MQ=255) tcgGAAATATGTGCAATGTCCACCTAAGGTTATGAACAAATTAAAAGCAGAAATACATTTGTTCAAAACt < 1:1691597/70‑1 (MQ=255) ggAAATATGTGCAATGTCCACCTAAGGTTATGAACAAATTAAAAGCAGAAATACATTTGTTCAAAACTCa < 1:2652139/70‑1 (MQ=255) ggAAATATGTGCAATGTCCACCTAAGGTTATGAACAAATTAAAAGCAGAAATACATTTGTTCAAAACTCAc < 1:100109/71‑1 (MQ=255) ggAAATATGTGCAATGTCCACCTAAGGTTATGAACAAATTAAAAGCAGAAATACATTTGTTCAAAACTCAc < 1:1608630/71‑1 (MQ=255) aaaTATGTGCAATGTCCACCTAAGGTTATGAACAAATTAAAAGCAGAAATACattt > 1:1847175‑M2/1‑52 (MQ=255) aaaTATGTGCAATGTCCACCTAAGGTTATGAACAAATTAAAAGCAGAAATACattt > 1:2202611‑M2/1‑52 (MQ=255) aaTATGTGCAATGTCCACCTAAGGTTATGAACAAATTAAAAGCAGAAATACATTTGTTCAAAACTCACCt > 1:2591439/1‑70 (MQ=255) aaTATGTGCAATGTCCACCTAAGGTTATGAACAAATTAAAAGCAGAAATACATTTGTTCAAAACTCACCTg > 1:3015619/1‑71 (MQ=255) atatGTGCAATGTCCACCTAAGGTTATGAACAAATTAAAAGCAGAAATACATTTGTTCAAAACTCACCTGc < 1:2796712/71‑1 (MQ=255) gtgCAATGTCCACCTAAGGTTATGAACAAATTAAAAGCAGAAATACatttgt < 1:1187161‑M2/52‑7 (MQ=255) tgCAATGTCCACCTAATGTTATGAACAAATTAAAAGCAGAAATACATTTGTTCAAAACTCACCTGCaaaa < 1:440899/70‑1 (MQ=255) tgCAATGTCCACCTAAGGTTATGAACAAATTAAAAGCAGAAATACATTTGTTCAAAACTCACCTGCaaaa < 1:100082/70‑1 (MQ=255) tgCAATGTCCACCTAAGGTTATGAACAAATTAAAAGCAGAAATACATTTGTTCAAAACTCACCTGCAAAAc < 1:3323216/71‑1 (MQ=255) gCAATGTCCACCTAAGGTTATGAACAAATTAAAAGCAGAAATACATTTGTTCaa < 1:366655/54‑1 (MQ=255) cAATGTCCACCTAAGGTTATGAACAAATTAAAAGCAGAAATACATTTGTTCaa > 1:2422789/1‑53 (MQ=255) aaTGTCCACCTAAGGTTATGAACAAATTAAAAGCAGAAATACATTTGTTCAAAACTCACCTGCAAAACTg > 1:479826/1‑70 (MQ=255) aTGTCCACCTAAGGTTATGAACAAATTAAAAGCAGAAATACATTTGTTCAAAACTCACCTGCAAAACTGaa > 1:3071551/1‑71 (MQ=255) aTGTCCACCTAAGGTTATGAACAAATTAAAAGCAGAAATACATTTGTTCAAAACTCACCTGCAAAACTGaa > 1:1298065/1‑71 (MQ=255) ccACCTAAGGTTATGAACAAATTAAAAGCAGAAATACATTTGTTCaaaa > 1:2568208/1‑49 (MQ=255) cACCTAAGGTTATGAACAAATTAAAAGCAGAAATACATTTGTTCaa < 1:2616470/46‑1 (MQ=255) aCCTAAGGTTATGAACAAATTAAAAGCAGAAATACATTTGTTCAAAACTCAc < 1:2070319/52‑1 (MQ=255) aCCTAAGGTTATGAACAAATTAAAAGCAGAAATACATTTGTTCAAAACTCAc < 1:2626203/52‑1 (MQ=255) aCCTAAGGTTATGAACAAATTAAAAGCAGAAATACATTTGTTCAAAACTCAc < 1:2585554/52‑1 (MQ=255) aCCTAAGGTTATGAACAAATTAAAAGCAGAAATACATTTGTTCAAAACTCAc < 1:3520947/52‑1 (MQ=255) aCCTAAGGTTATGAACAAATTAAAAGCAGAAATACATTTGTTCAAAACTCACCTGCAAAACTGAACgggg > 1:684494/1‑70 (MQ=255) ccTAAGGTTATGAACAAATTAAAAGCAGAAATACatttgtt > 1:3059929‑M2/1‑34 (MQ=255) ccTAAGGTTATGAACAAATTAAAAGCAGAAATACATTTGTTCaaaa > 1:3643134/1‑46 (MQ=255) ccTAAGGTTATGAACAAATTAAAAGCAGAAATACATTTGTTCAAAACTCACCTGCAAAACTGAACggggg > 1:1977062/1‑70 (MQ=255) ccTAAGGTTATGAACAAATTAAAAGCAGAAATACATTTGTTCAAAACTCACCTGCAAAACTGAACGGGGGa < 1:2229069/71‑1 (MQ=255) cTAAGGTTATGAACAAATTAAAAGCAGAAATACATTTGTTCAAAACTCACCTGCAAAACTGAACGGGGGa > 1:2697796/1‑70 (MQ=255) tAAGGTTATGAACAAATTAAAAGCAGAAATACATTTGTTCAAAACTCAc > 1:2909679/1‑49 (MQ=255) tAAGGTTATGAACAAATTAAAAGCAGAAATACATTTGTTCAAAACTCACCTGCAAAACTGAACGGGGGaaa > 1:3083314/1‑71 (MQ=255) tAAGGTTATGAACAAATTAAAAGCAGAAATACATTTGTTCAAAACTCACCTGCAAAACTGAACGGGGGaaa > 1:2835550/1‑71 (MQ=255) aGGTTATGAACAAATTAAAAGCAGAAATACATTTGTTCAAAACTCACCTGCAAAACCGAACGGGGGaaa < 1:1804486/69‑1 (MQ=255) ggTTATGAACAAATTAAAAGCAGAAATACATTTGTTCAAAACTCACCTGCaa < 1:3194734/52‑1 (MQ=255) ttATGAACAAATTAAAAGCAGAAATACatttgttca > 1:667206‑M2/1‑27 (MQ=255) ttATGAACAAATTAAAAGCAGAAATACATTTGTTCAAAACTCACCTGCAAAACTGAACGGGGGAAATATg > 1:442934/1‑70 (MQ=255) ttATGAACAAATTAAAAGCAGAAATACATTTGTTCAAAACTCACCTGCAAAACTGAACGGGGGAAATATg > 1:138914/1‑70 (MQ=255) aTGAACAAATTAAAAACAGAAATACATTTGTTCAAAACTCACCTGCAAAACTGAACGGGGGAAATATGCa < 1:1060898/70‑1 (MQ=255) tGAACAAATTAAAAGCAGAAATACATTTGTTCAAAACTCACCTGCAAAACTGAACGGGGGAAata > 1:281953/1‑65 (MQ=255) tGAACAAATTAAAAGCAGAAATACATTTGTTCAAAACTCACCTGCAAAACTGAACGGGGGAAATATg < 1:893997/67‑1 (MQ=255) tGAACAAATTAAAAGCAGAAATACATTTGTTCAAAACTCACCTGCAAAACTGAACGGGGGAAATATGCaa < 1:756346/70‑1 (MQ=255) tGAACAAATTAAAAGCAGAAATACATTTGTTCAAAACTCACCTGCAAAACTGAACGGGGGAAATATGCaa < 1:2032339/70‑1 (MQ=255) aaCAAATTAAAAGCAGAAATACATTTGTTCAAAACTCACCTGCAAAACTGAACGGGGGAAATATGCAAACg < 1:2206119/71‑1 (MQ=255) aCAAATTAAAAGCAGAAATACATTTGTTCAAAACTCAcc < 1:402208/39‑1 (MQ=255) aCAAATTAAAAGCAGAAATACATTTGTTCAAAACTCAcc < 1:253527/39‑1 (MQ=255) aCAAATTAAAAGCAGAAATACATTTGTTCAAAACTCAcc < 1:1267908/39‑1 (MQ=255) cAAATTAAAAGCAGAAATACATTTGTTCAAAACTCACCTGCAAAAc > 1:2601231/1‑46 (MQ=255) cAAATTAAAAGCAGAAATACATTAGTTCAAAACTCACCTGCAAAACTGAACGGGGGAAATATGCAAACGAg > 1:3255449/1‑71 (MQ=255) aTTAAAAGCAGAAATACATTTGTTCAAAACTCACCTGCAAAACTGAACGGGGGAAATATGCAAACGAGTGa < 1:3437041/71‑1 (MQ=255) aTTAAAAGCAGAAATACATTTGTTCAAAACTCACCTGCAAAACTGAACGGGGGAAATATGCAAACGAGTGa < 1:250496/71‑1 (MQ=255) tAAAAGCAGAAATACATTTGTTCAAAACTCACCTGCAAAACTGAACgggg > 1:1618768/1‑50 (MQ=255) tAAAAGCAGAAATACATTTGTTCAAAACTCACCTGCAAAACTGAACGGGGGAAATATGCAAACGAGTGAt > 1:1041888/1‑70 (MQ=255) tAAAAGCAGAAATACATTTGTTCAAAACTCACCTGCAAAACTGAACGGGGGAAATATGCAAACGAGTGAt < 1:2753845/70‑1 (MQ=255) tAAAAGCAGAAATACATTTGTTCAAAACTCACCTGCAAAACTGAACGGGGGAAATATGCAAACGAGTGATa > 1:1976154/1‑71 (MQ=255) aaaaGCAGAAATACatttgttcataaccttaggtgg > 1:3040116‑M2/1‑14 (MQ=255) aaGCAGAAATACatttgttcataaccttaggtggac < 1:3295586‑M2/36‑25 (MQ=255) aGCAGAAATACatttgttcataaccttaggtggacattgcac < 1:1248222‑M2/42‑32 (MQ=255) aGAAATACATTTGTTCAAAACTCACCTGCAAAACTGAACg < 1:1671614/40‑1 (MQ=255) aaTACATTTGTTCAAAACTCACCTGCAAAACTGAACGGGGGAAATATGCAAACGAGTGATACCCGCGCGt < 1:3363948/70‑1 (MQ=255) aTACATTTGTTCAAAACTCACCTGCAAAACTGAACGGGGGAAATATGCAAACGAGTGATACCCGCGCGttt < 1:3319442/71‑2 (MQ=255) tACATTTGTTCAAAACTCACCTGCAAAACTGAACGGGGGa < 1:972580/40‑1 (MQ=255) tACATTTGTTCAAAACTCACCTGCAAAACTGAACGGGGGa < 1:2680299/40‑1 (MQ=255) tACATTTGTTCAAAACTCACCTGCAAAACTGAACGGGGGa < 1:1599350/40‑1 (MQ=255) tACATTTGTTCAAAACTCACCTGCAAAACTGAACGGGGGAAATATGCAAACGAGTGATACCCGCGCGTTAc < 1:1631964/71‑1 (MQ=255) aCATTTGTTCAAAACTCACCTGCAAAACTGAACGGGGGAAATATGCaaa > 1:2934998/1‑49 (MQ=255) aCATTTGTTCAAAACTCACCTGCAAAACTGAACGGGGGAAATATGCAAACGAGTGATACCCGCGCGTTAc > 1:2338061/1‑70 (MQ=255) | ATTGTGATCTATTCGTCGGAAATATGTGCAATGTCCACCTAAGGTTATGAACAAATTAAAAGCAGAAATACATTTGTTCAAAACTCACCTGCAAAACTGAACGGGGGAAATATGCAAACGAGTGATACCCGCGCGTTAC > minE/969554‑969692 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |