| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | 981092 = | 48 (0.810) | 5 (0.090) | 3/94 | NT | 8.8% | coding (73/498 nt) | ydfP | conserved hypothetical protein |
| ? | minE | 981138 = | 60 (1.100) | coding (27/498 nt) | ydfP | conserved hypothetical protein | |||||
TTCCGCCCATTTTTTTTGCCATCCTCGGTCGCTCCAGACATTTCCGACGATAAATCCTGACAACACGAGAAAAATCACCATGAATATCTGATTCACTGTTCTATCCCCCAGCAGGTTAATGCGCTCTCCTGGTCACGAC > minE/981069‑981207 | ttCCGCCCATTTTTTTTGCCATCCTCGGTCGCTCCAGACATTTCCGACGATAAATCCTGACAACACGAGaa < 1:1462417/71‑1 (MQ=255)atcagatattcatggtgatttttCTCGGTCGCTCCAGACATTTCCGACGATAAATCCTGACAACACGAGaa > 1:3596181‑M1/24‑71 (MQ=255) tCCGCCCATTTTTTTTGCCATCCTCGGTCGCTCCAGACATTTCCGACGATAAATCCTGACAACACGAGaa > 1:2000442/1‑70 (MQ=255) cGCCCATTTTTTTTGCCATCCTCTGTCGCTCCAGACATTTCCGACGATAAATCCTGACAACACGAGaaaa < 1:2671699/70‑1 (MQ=255) cGCCCATTTTTTTTGCCATCCTCGGTCGCTCCAGACATTTCCGACGATAAATCCTGACAACACGAGaaaa < 1:1874746/70‑1 (MQ=255) cGCCCATTTTTTTTGCCATCCTCGGTCGCTCCAGACATTTCCGACGATAAATCCTGACAACACGAGaaaa < 1:2248817/70‑1 (MQ=255) cGCCCATTTTTTTTGCCATCCTCGGTCGCTCCAGACATTTCCGACGATAAATCCTGACAACACGAGaaaa < 1:248632/70‑1 (MQ=255) gCCCATTTTTTTTGCCATCCTCGGTCGCTCCAGACATTTCCGACGATAAATCCTGACAACACGAGAAAAAt > 1:3134856/1‑71 (MQ=255) ttttttttGCCATCCTCGGTCGCTCCAGACATTTCCGACGATAAATCCTGACAACACGAGAAAAATCACCa > 1:1083803/1‑71 (MQ=255) tttttttGCCATCCTCGGTCGCTCCAGACATTTCCGACGATAAATCCTGACAACACGAGAAAAATCACCAt > 1:1678690/1‑71 (MQ=255) tttttGCCATCCTCGGTCGCTCCAGACATTTCCGACGATAAATCCTGACAACACGAGAAAAATCACCATg < 1:1410348/70‑1 (MQ=255) ttttGCCATCCTCGGTCGCTCCAGACATTTCCGACGATAAATCCTGACAACACGAGaa < 1:1092847/58‑1 (MQ=255) ttttGCCATCCTCGGTCGCTCCAGACATTTCCGACGATAAATCCTGACAACACGAGaa < 1:588349/58‑1 (MQ=255) ttttGCCATCCTCGGTCGCTCCAGACATTTCCGACGATAAATCCTGACAACACGAGAAAAATCACCATGaa > 1:2310941/1‑71 (MQ=255) ccATCCTCGGTCGCTCCAGACATTTCCGACGATAAATCCTGACAACACGAGAAAAATCACCATGAATATc < 1:1870512/70‑1 (MQ=255) ccATCCTCGGTCGCTCCAGACATTTCCGACGATAAATCCTGACAACACGAGAAAAATCACCATGAATATCt < 1:1358877/71‑1 (MQ=255) ccATCCTCGGTCGCTCCAGACATTTCCGACGATAAATCCTGACAACACGAGAAAAATCACCATGAATATCt < 1:2273636/71‑1 (MQ=255) cATCCTCGGTCGCTCCAGACATTTCCGACGATAAATCCTGACAACCCGAGAAAAATCACCATGAATATc > 1:3361284/1‑69 (MQ=255) cATCCTCGGTCGCTCCAGACATTTCCGACGATAAATCCTGACAACACGAGAAAAATCAcc < 1:1085615/60‑1 (MQ=255) aTCCTCGGTCGCTCCAGACATTTCCGACGATAAATCCTGACAACACGAGAAAAATCACCATGAATATCTGa > 1:263979/1‑71 (MQ=255) ttctcgtgttgtcaggatttatcgtcggaaatgtctggagcgaccgagAAAAATCACCATGAATATCTGAt > 1:3596181‑M2/49‑71 (MQ=255) tCCTCGGTCGCTCCAGACATTTCCGACGATAAATCCTGACAACACGAGAAAAATCACCATGAATATCTGAt > 1:1401466/1‑71 (MQ=255) tCCTCGGTCGCTCCAGACATTTCCGACGATAAATCCTGACAACACGAGAAAAATCACCATGAATATCTGAt > 1:3998/1‑71 (MQ=255) tCCTCGGTCGCTCCAGACATTTCCGACGATAAATCCTGACAACACGAGAAAAATCACCATGAATATCTGAt > 1:2986086/1‑71 (MQ=255) tCCTCGGTCGCTCCAGACATTTCCGACGATAAATCCTGACAACACGAGAAAAATCACCATGAATATCTGAt > 1:1864361/1‑71 (MQ=255) tCCTCGGTCGCTCCAGACATTTCCGACGATAAATCCTGACAACACGAGAAAAATCACCATGAATATCTGAt > 1:1785626/1‑71 (MQ=255) ccTCGGTCGCTCCAGACATTTCCGACGATAAATCCTGACAACACGAGaaa < 1:3142595/50‑1 (MQ=255) CTCGGTCGCTCCAGACATTTCCGACGATAAATCCTGACAACACGAGAAAAATCAc < 1:2789889‑M1/55‑1 (MQ=255) CTCGGTCGCTCCAGACATTTCCGACGATAAATCCTGACAACACGAGAAAAATCAc < 1:2470449‑M1/55‑1 (MQ=255) CTCGGTCGCTCCAGACATTTCCGACGATAAATCCTGACAACACGAGAAAAATCAc < 1:1689826‑M1/55‑1 (MQ=255) CTCGGTCGCTCCAGACATTTCCGACGATAAATCCTGACAACACGAGAAAAATCAc < 1:1601444‑M1/55‑1 (MQ=255) CTCGGTCGCTCCAGACATTTCCGACGATAAATCCTGACAACACGAGAAAAATCACCATGaa < 1:2928355‑M1/61‑1 (MQ=255) CTCGGTCGCTCCAGACATTTCCGACGATAAATCCTGACAACACGAGAAAAATCACCATGa < 1:1911062‑M1/60‑1 (MQ=255) CTCGGTCGCTCCAGACATTTCCGACGATAAATCCTGACAACACGAGAAAAATCACCATGAATATCTGAtt < 1:2256795‑M1/70‑1 (MQ=255) TCGGTCGCTCCAGACATTTCCGACGATAAATCCTGACAACACGAGAAAAAt < 1:725568‑M1/51‑1 (MQ=255) GGTCGCTCCAGACATTTCCGACGATAAATCCTGACAACACGAGAAAAATCACCATg < 1:3474291‑M1/56‑1 (MQ=255) gTCGCTCCAGACATTTCCGACGATAAATCCTGACAACACGAGAAAAATCACCATGAATATCTGATTCACTg > 1:2859105/1‑71 (MQ=255) gTCGCTCCAGACATTTCCGACGATAAATCCTGACAACACGAGAAAAATCACCATGAATATCTGATTCACTg < 1:2084087/71‑1 (MQ=255) gTCGCTCCAGACATTTCCGACGATAAATCCTGACAACACGAGAAAAATCACCATGAATATCTGATTCACTg < 1:2934513/71‑1 (MQ=255) tCGCTCCAGACATTTCCGACGATAAATCCTGACAACACGAGAAAAATCACCAt < 1:1849479/53‑1 (MQ=255) tCGCTCCAGACATTTCCGACGATAAATCCTGACAACACGAGAAAAATCACCAt < 1:568295/53‑1 (MQ=255) tCGCTCCAGACATTTCCGACGATAAATCCTGACAACACGAGAAAAATCACCAt < 1:41897/53‑1 (MQ=255) tCGCTCCAGACATTTCCGACGATAAATCCTGACAACACGAGAAAAATCACCAt < 1:378037/53‑1 (MQ=255) tCGCTCCAGACATTTCCGACGATAAATCCTGACAACACGAGAAAAATCACCAt < 1:1702331/53‑1 (MQ=255) gttgtcaggatttatcgtcggaaatgtctggagcgaccgagAAAAATCACCATGAATATCTGATTCACTGt > 1:3077313‑M2/42‑71 (MQ=255) cGCTCCAGACATTTCCGACGATAAATCCTGACAACACGAGAAAAAt < 1:388841/46‑1 (MQ=255) gCTCCAGACATTTCCGACGATAAATCCTGACAACACGAGAAAAATCACCATGAATATCTGATTCACTGtt < 1:1575184/70‑1 (MQ=255) gtcaggatttatcgtcggaaatgtctggagcgaccgagAAAAATCACCATGAATATCTGATTCACTGTTc < 1:1378772‑M2/32‑1 (MQ=255) gtcaggatttatcgtcggaaatgtctggagcgaccgagAAAAATCACCATGAATATCTGATTCACTGTTc < 1:2876417‑M2/32‑1 (MQ=255) gtcaggatttatcgtcggaaatgtctggagcgaccgagAAAAATCACCATGAATATCTGATTCACTGTTc < 1:1755046‑M2/32‑1 (MQ=255) cTCCAGACATTTCCGACGATAAATCCTGACAACACGAGAAAAATCACCATGAATATCTGATTCACTGTTCt < 1:226050/71‑1 (MQ=255) tCCAGACATTTCCGACTATAAATCCTGACAACACGAGAAAAATCACCAt < 1:3586425/49‑1 (MQ=255) tCCAGACATTTCCGACGATAAATCCTGACAACACGAGAAAAATCACCAt < 1:1380598/49‑1 (MQ=255) ccAGACATTTCCGACGATAAATCCTGACAACACGAGAAAAATCACAAt < 1:2537230/48‑1 (MQ=255) cAGACATTTCCGACGATAAATCCTGACAACACGAGAAAAATCACCATGAATATCTGATTCACTGTTCTATc > 1:3582272/1‑71 (MQ=255) cAGACATTTCCGACGATAAATCCTGACAACACGAGAAAAATCACCATGAATATCTGATTCACTGTTCTATc > 1:1021482/1‑71 (MQ=255) gACATTTCCGACGATAAATCCTGACAACACGAGaa < 1:1350403/35‑1 (MQ=255) gACATTTCCGACGATAAATCCTGACAACACGAGAAAAATCACCATGAATATCTGATTCACTGTTCTATccc < 1:275511/71‑1 (MQ=255) gACATTTCCGACGATAAATCCTGACAACACGAGAAAAATCACCATGAATATCTGATTCACTGTTCTATccc < 1:1272476/71‑1 (MQ=255) gACATTTCCGACGATAAATCCTGACAACACGAGAAAAATCACCATGAATATCTGATTCACTGTTCTATcc > 1:3049421/1‑70 (MQ=255) aCATTTCCGACGATAAATCCTGACAACACGAGAAAAATCACCATGAATATCTGATTCACTGTTCTATcccc > 1:1352978/1‑71 (MQ=255) aCATTTCCGACGATAAATCCTGACAACACGAGAAAAATCACCATGAATATCTGATTCACTGTTCTATcccc > 1:2707287/1‑71 (MQ=255) aCATTTCCGACGATAAATCCTGACAACACGAGAAAAATCACCATGAATATCTGATTCACTGTTCTATccc < 1:279770/70‑1 (MQ=255) cATTTCCGACGATAAATCCTGACAACACGACAAAAATCACCATGAATATCTGATTCACTGTTCTATcccc > 1:1276962/1‑70 (MQ=255) tttCCGACGATAAATCCTGACAACACGAGAAAAATCACCATGAATATCTGAtt < 1:1533754/53‑1 (MQ=255) tttCCGACGATAAATCCTGACAACACGAGAAAAATCACCATGAATATCTGAtt < 1:560623/53‑1 (MQ=255) ttCCGACGATAAATCCTGACAACACGAGAAAAATCACCATGAATATCTGATTCACTGTTCTATCCCCcag > 1:2563815/1‑70 (MQ=255) tCCGACGATAAATCCTGACAACACGAGAAAAATCACCATGAATATCTGATTCa > 1:193602/1‑53 (MQ=255) tCCGACGATAAATCCTGACAACACGAGAAAAATCACCATGAATATCTGATTCa > 1:13090/1‑53 (MQ=255) ccGACGATAAATCCTGACAACACGAGAAAAATCACCATGAATATCTGATTCACTGTTCTATCCCCcagcag > 1:2532981/1‑71 (MQ=255) ccGACGATAAATCCTGACAACACGAGAAAAATCACCATGAATATCTGATTCACTGTTCTATCCCCcagcag > 1:873162/1‑71 (MQ=255) cgacgaTAAATCCTGACAACACGAGAAAAATCACCATGAATATCTGATTCACTGTTCTATCCCCcagcag < 1:2877939/70‑1 (MQ=255) cgacgaTAAATCCTGACAACAAGAGAAAAATCACCATGAATATCTGATTCACTGTTCTa < 1:3700596/59‑1 (MQ=255) aTCCTGACAACACGAGAAAAATCACCATGAATATCTGATTCACTGTTCTATCCCCCAGCAGGTTAATgcg < 1:1326399/70‑1 (MQ=255) ccTGACAACACGAGAAAAATCACCATGAATATCTGATTCACTGTTCTATCCCCCAGCAGGTTAATGCGctc > 1:3170676/1‑71 (MQ=255) ccTGACAACACGAGAAAAATCACCATGAATATCTGATTCACTGTTCTATCCCCCAGCAGGTTAATGCGct > 1:3322802/1‑70 (MQ=255) ccTGACAACACGAGAAAAATCACCATGAATATCTGATTCACTGTTCTATCCCCCAGCAGGTTAATGCGct > 1:63307/1‑70 (MQ=255) cTGACAACACGAGAAAAATCACCATGAATATCTGATTCACTGTTCTATCCCCCAGCAGGTTAATGCGctct > 1:3229442/1‑71 (MQ=255) tGACAACACGAGAAAAATCACCATGAATATCTGATTCACTGTTCTATc > 1:498168/1‑48 (MQ=255) tGACAACACGAGAAAAATCACCATGAATATCTGATTCACTGTTCTATCCCCcagca > 1:967888/1‑56 (MQ=255) tGACAACACGAGAAAAATCACCATGAATATCTGATTCACTGTTCTATCCCCcagca > 1:1646026/1‑56 (MQ=255) acaacaCGAGAAAAATCACCATGAATATCTGATTCACTGTTCTATCCCCCAGCAGGTTAATGCGCtctc < 1:3670252/69‑1 (MQ=255) acaacaCGAGAAAAATCACCATGAATATCTGATTCACTGTTCTATCCCCCAGCAGGTTAATGCGCtctc < 1:436220/69‑1 (MQ=255) acaacaCGAGAAAAATCACCATGAATATCTGATTCACTGTTCTATCCCCCAGCAGGTTAATGCGCTCTcc < 1:1347815/70‑1 (MQ=255) acaacaCGAGAAAAATCACCATGAATATCTGATTCACTGTTCTATCCCCCAGCAGGTTAATGCGCTCTCCt > 1:253658/1‑71 (MQ=255) acacGAGAAAAATCACCATGAATATCTGATTCACTGTTCTATCCCCCAGCAGGt < 1:3151508/54‑1 (MQ=255) acacGAGAAAAATCACCATGAATATCTGATTCACTGTTCTATCCCCCAGCAGGTTAATGCGCTCTCCTGGt < 1:286658/71‑1 (MQ=255) acacGAGAAAAATCACCATGAATATCTGATTCACTGTTCTATCCCCCAGCAGGTTAATGCGCTCTCCTGGt < 1:1642198/71‑1 (MQ=255) cacGAGAAAAATCACCATGAATATCTGATTCACTGTTCTATCCCCCAGCAGGt < 1:1401725/53‑1 (MQ=255) cgagAAAAATCACCATGAATATCTGATTCACTGTTCTATCCCCCAGCAGGTTAATGCGCTCTCCTGGTCac > 1:3592088‑M2/5‑71 (MQ=255) cgagAAAAATCACCATGAATATCTGATTCACTGTTCTATCCCCCAGCAGGTTAATGCGCTCTCCTGGTCac > 1:2499932‑M2/5‑71 (MQ=255) agAAAAATCACCATGAATATCTGATTCACTGTTCTATc > 1:314359‑M2/3‑38 (MQ=255) gAAAAATCACCATGAATATCTGATTCACTGTTCTATCCCCCAGCAGGTTAATGCGCTCTCCTGGTCacgac > 1:1181328‑M2/2‑71 (MQ=255) aaaaaTCACCATGAATATCTGATTCACTGTTCTATCCCCCAGCAGGTTAATGCGCTCTCCTGGTCacgac > 1:3125232/1‑70 (MQ=255) | TTCCGCCCATTTTTTTTGCCATCCTCGGTCGCTCCAGACATTTCCGACGATAAATCCTGACAACACGAGAAAAATCACCATGAATATCTGATTCACTGTTCTATCCCCCAGCAGGTTAATGCGCTCTCCTGGTCACGAC > minE/981069‑981207 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |