| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | = 1756898 | 39 (0.660) | 8 (0.160) | 4/88 | NT | 18.5% | coding (34/273 nt) | yfiM | hypothetical protein |
| ? | minE | = 1756905 | 37 (0.730) | coding (41/273 nt) | yfiM | hypothetical protein | |||||
TCGCTATTGTTACTTTCTGGATGCAGCCATATGGCTAACGATAGCTGGAGCGGGCAGGATAAAGCTCAACACTTTATCGCCTCGGCGATGCTTTCCGCCGCCGGAAATGAATATTCACAGCATCAGGGGATGAGCC > minE/1756835‑1756970 | tCGCTATTGTTACTTTCTGGATGCAGCCATATGGCTAACGATAGCTGGAGCGGGCAGGATAAAGCTCAaca > 1:3513617/1‑71 (MQ=255) ttGTTACTTTCTGGATGCAGCCATATGGCTAACGATAGCTGGAGCGGGCAGGATAAAGCTCAACActtta > 1:2416975‑M2/1‑65 (MQ=255) ttGTTACTTTCTGGATGCAGCCATATGGCTAACGATAGCTGGAGCGGGCAGGATAAAGCTCAACActtta > 1:2540891‑M2/1‑65 (MQ=255) gTTACTTTCTGGATGCAGCCATATGGCTAACGATAGCTGGAGCGGGCAGGATAAAGCTCAACActtt > 1:2010583‑M2/1‑63 (MQ=255) gTTACTTTCTGGATGCAGCCATATGGCTAACGATAGCTGGAGCGGGCAGGATAAAGCTCAACACTTTATCg > 1:2264340/1‑71 (MQ=255) tGCAGCCATATGGCTAACGATAGCTGGAGCGGGCAGGATAAAGCTCAACACTTTATCGCCTCGGCGATGCt < 1:1775496/71‑1 (MQ=255) gCAGCCATATGGCTAACGATAGCTGGAGCGGGCAGGATAAAGCTCAACACTTTATCGCCTCGGCGATGCtt > 1:465825/1‑71 (MQ=255) aGCCATATGGCTAACGATAGCTGGAGCGGGCAGGATAAAGCTCAACACTTTATCGCCTCGGCGa < 1:648526/64‑1 (MQ=255) aGCCATATGGCTAACGATAGCTGGAGCGGGCAGGATAAAGCTCAACACTTTATCGCCTCGGCGa < 1:1879465/64‑1 (MQ=255) aGCCATATGGCTAACGATAGCTGGAGCGGGCAGGATAAAGCTCAACACTTTATCGCCTCGGCGATGCTTTc > 1:3548871/1‑71 (MQ=255) aGCCATATGGCTAACGATAGCTGGAGCGGGCAGGATAAAGCTCAACACTTTATCGCCTCGGCGATGCTTTc < 1:32499/71‑1 (MQ=255) aGCCATATGGCTAACGATAGCTGGAGCGGGCAGGATAAAGCTCAACACTTTATCGCCTCGGCGATGCTTTc < 1:1373693/71‑1 (MQ=255) aGCCATATGGCTAACGATAGCTGGAGCGGGCAGGATAAAGCTCAACACTTTATCGCCTCGGCGATGCTTTc > 1:216117/1‑71 (MQ=255) gCCATATGGCTAACGATAGCTGGTGCGGGCAGGATAAAGCTCAACActttatc > 1:1965810‑M2/1‑46 (MQ=255) gCCATATGGCTAACGATAGCTGGAGCGGGCAGGATAAAGCTCAACACTTTATCGCCTCGGCGATGCttt < 1:1226194/69‑1 (MQ=255) ccATATGGCTAACGATAGCTGGAGCGGGCAGGATAAAGCTCAACActttatc < 1:3001165‑M2/52‑8 (MQ=255) ccATATGGCTAACGATAGCTGGAGCGGGCAGGATAAAGCTCAACActttatc < 1:2331024‑M2/52‑8 (MQ=255) ccATATGGCTAACGATAGCTGGAGCGGGCAGGATAAAGCTCAACActttatc < 1:2054454‑M2/52‑8 (MQ=255) ccATATGGCTAACGATAGCTGGAGCGGGCAGGATAAAGCTCAACActttatc < 1:1189941‑M2/52‑8 (MQ=255) cATATGGCTAACGATAGCTGGAGCGGGCAGGATAAAGCTCAACACTTTATCGCCTCGGCGATGCTTTccgc > 1:1808318/1‑71 (MQ=255) atatGGCTAACGATAGCTGGAGCGGGCAGGATAAAGCTCAACACTTTATCGCCTCGGCGATGCTTTccgcc > 1:2276918/1‑71 (MQ=255) tatGGCTAACGATAGCTGGAGCGGGCAGGATAAAGCTCAACActtt > 1:2955148‑M2/1‑42 (MQ=255) tatGGCTAACGATAGCTGGAGCGGGCAGGATAAAGCTCAACACTTTATCGCCTCGGCGATGCTTTccgccg > 1:1331384/1‑71 (MQ=255) atGGCTAACGATAGCTGGAGCGGGCAGGATAAAGCTCAACACTTTATCGCCTCGGCGATGCTTTccgccgc > 1:3071113/1‑71 (MQ=255) tGGCTAACGATAGCTGGAGCGGGCAGGATAAAGCTCAACACTTTATCGc > 1:689508/1‑49 (MQ=255) tGGCTAACGATAGCTGGAGCGGGCAGGATAAAGCTCAACACTTTATCGc > 1:3052474/1‑49 (MQ=255) tGGCTAACGATAGCTGGAGCGGGCAGGATAAAGCTCAACACTTTATCGc > 1:299255/1‑49 (MQ=255) tGGCTAACGATAGCTGGAGCGGGCAGGATAAAGCTCAACACTTTATCGc > 1:3097778/1‑49 (MQ=255) tGGCTAACGATAGCTGGAGCGGGCAGGATAAAGCTCAACACTTTATCGCCTCGGCGATGCTTTccgccgc > 1:635802/1‑70 (MQ=255) tGGCTAACGATAGCTGGAGCGGGCAGGATAAAGCTCAACACTTTATCGCCTCGGCGATGCTTTccgccgc < 1:894114/70‑1 (MQ=255) tGGCTAACGATAGCTGGAGCGGGCAGGATAAAGCTCAACACTTTATCGCCTCGGCGATGCTTTccgccgc < 1:2446683/70‑1 (MQ=255) tGGCTAACGATAGCTGGAGCGGGCAGGATAAAGCTCAACACTTTATCGCCTCGGCGATGCTTTccgccgc < 1:1545883/70‑1 (MQ=255) tGGCTAACGATAGCTGGAGCGGGCAGGATAAAGCTCAACACTTTATCGCCTCGGCGATGCTTTccgccgc < 1:3069420/70‑1 (MQ=255) tGGCTAACGATAGCTGGAGCGGGCAGGATAAAGCTCAACACTTTATCGCCTCGGCGATGCTTTccgccgc < 1:3721967/70‑1 (MQ=255) tAACGATAGCTGGAGCGGGCAGGATAAAGCTCAACActttat < 1:3495918‑M2/42‑7 (MQ=255) aCGATAGCTGGAGCGGGCAGGATAAAGCTCAACACTTTATCGCCTCGGCGATGCTTTCCGCCGCCGGAAAt < 1:2575859/71‑1 (MQ=255) aCGATAGCTGGAGCGGGCAGGATAAAGCTCAACACTTTATCGCCTCGGCGATGCTTTCCGCCGCCGGAAAt < 1:2109419/71‑1 (MQ=255) aCGATAGCTGGAGCGGGCAGGATAAAGCTCAACACTTTATCGCCTCGGCGATGCTTTCCGCCGCCGGAAAt < 1:428320/71‑1 (MQ=255) tAGCTGGAGCGGGCAGGATAAAGCTCAACActttat > 1:2238156‑M2/1‑30 (MQ=255) aGCTGGAGCGGGCAGGATAAAGCTCAACACTTTATCGCCTCCGCGa < 1:891611/46‑1 (MQ=255) gCTGGAGCGGGCAGGATAAAGCTCAACACTTTATCg > 1:201043/1‑36 (MQ=255) tGGAGCGGGCAGGATAAAGCTCAACACTTTATCGCCTCGGCGa < 1:488062/43‑1 (MQ=255) gAGCGGGCAGGATAAAGCTCAACACTTTATCGCCTCGGCGATGCTTTCCGCCGCCGGAAATGAATATTca > 1:1362039/1‑70 (MQ=255) gAGCGGGCAGGATAAAGCTCAACACTTTATCGCCTCGGCGATGCTTTCCGCCGCCGGAAATGAATATTca > 1:351581/1‑70 (MQ=255) gggCAGGATAAAGCTCAACACTTTATCGCCTCGGCGATGCTTTCCGCCGCCGGAAATGAATATTCACAGCa < 1:18191/71‑1 (MQ=255) ggCAGGATAAAGCTCAACACTTTATCGCCTCGGCGATGCTTTCCGCCGCCGGAAATGAATATTCACAGCAt < 1:2256157/71‑1 (MQ=255) cAGGATAAAGCTCAACActttatcctgcccgctccagctatcgttagccatatggctgcat > 1:1923014‑M2/1‑17 (MQ=255) cAGGATAAAGCTCAACActttatcctgcccgctccagctatcgatagccatatggctgcat > 1:1277016‑M2/1‑17 (MQ=255) ggATAAAGCTCAACActttatcctgcccgctccagctatcgttagccatatggctgcatcc < 1:2830490‑M2/61‑47 (MQ=255) ggATAAAGCTCAACActttatcctgcccgctccagctatcgttagccatatggc < 1:2362105‑M2/54‑40 (MQ=255) gATAAAGCTCAACActttatcctgcccgctccagctatcgttagccatatggctgcatccagaaagtaac > 1:756946‑M2/1‑14 (MQ=255) gATAAAGCTCAACActttatcctgcccgctccagctatcgttagccatatggctgcatccagaaagtaac > 1:1239665‑M2/1‑14 (MQ=255) gATAAAGCTCAACACTTTATCGCCTCGGCGATGCTTTCCGCCGCCGGAAATGAATATTca > 1:1491434/1‑60 (MQ=255) gATAAAGCTCAACACTTTATCGCCTCGGCGATGCTTTCCGCCGCCGGAAATGAATATTCACAGCATCAggg > 1:2325528/1‑71 (MQ=255) gATAAAGCTCAACACTTTATCGCCTCGGCGATGCTTTCCGCCGCCGGAAATGAATATTCACAGCATCAggg > 1:2795713/1‑71 (MQ=255) tAAAGCTCAACActttatcctgcccgctccagctatcgttagccatatggctgcatccagaaagtaacaa < 1:1068054‑M2/70‑59 (MQ=255) tAAAGCTCAACActttatcctgcccgctccagctatcgttag < 1:2482889‑M2/42‑31 (MQ=255) tAAAGCTCAACACTTTATCGCCTCGGCGATGCTTTCCGCCGCCGGAAATGAATATTCACAGCATCAGGGGa > 1:1863614/1‑71 (MQ=255) aaGCTCAACACTTTATCGCCTCGGCGATGCTTTCCGCCGCCGGAAATGAATATTCACAGCATCAGGGGAt < 1:3492145/70‑1 (MQ=255) aaGCTCAACACTTTATCGCCTCGGCGATGCTTTCCGCCGCCGGAAATGAATATTCACAGCATCAGGGGAt < 1:345059/70‑1 (MQ=255) aGCTCAACACTTTATCGCCTCGGCGATGCTTTCCGCCGCCGGAAATGAATATTCACAGCATCAgggg < 1:1982997/67‑1 (MQ=255) aGCTCAACACTTTATCGCCTCGGCGATGCTTTCCGCCGCCGGAAATGAATATTCACAGCATCAgggg < 1:933889/67‑1 (MQ=255) cTCAACACTTTATCGCCTCGGCGATGCTTTCCGCCGCCGGAAATGAATATTCACAGCATCAGGGGAt > 1:33546/1‑67 (MQ=255) aaCACTTTATCGCCTCGGCGATGCTTTCCGCCGCCGGAAATGAATATTCACAGCATCAGGGGATGAGcc < 1:3337811/69‑1 (MQ=255) | TCGCTATTGTTACTTTCTGGATGCAGCCATATGGCTAACGATAGCTGGAGCGGGCAGGATAAAGCTCAACACTTTATCGCCTCGGCGATGCTTTCCGCCGCCGGAAATGAATATTCACAGCATCAGGGGATGAGCC > minE/1756835‑1756970 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |