| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | = 1852566 | 53 (0.900) | 7 (0.140) | 3/86 | NT | 14.2% | coding (1055/1509 nt) | ygcL | hypothetical protein |
| ? | minE | = 1852580 | 40 (0.800) | coding (1041/1509 nt) | ygcL | hypothetical protein | |||||
CCCTGATTAAACATCAACACATCATGACGCCGTTCAAGAATAGATGCTTGATTATTACGATATCCCCCCATAATCAATTCAAGAGGACTTTGCGGCGCAATATTTCTGAATTGATTCACAACCGCCGCCACGCG > minE/1852512‑1852645 | cccTGATTAAACATCAACACATCATGACGCCGTTCAAGAATAGATGCTTGATTATTACGATATCCCCCCat > 1:3581777‑M2/1‑69 (MQ=255) cTGATTAAACATCAACACATCATGACGCCGTTCAAGAATAGATGCTTGATTATTACGATATCCCCCCataa > 1:1441261‑M2/1‑67 (MQ=255) gATTAAACATCAACACATCATGACGCCGTTCAAGAATAGATGCTTGATTATTACGATATCCCCCCataat < 1:3374347‑M2/70‑6 (MQ=255) aTTAAACATCAACACATCATGACGCCGTTCAAGAATAGATGCTTGATTATTACGATATCCCCCCataatc > 1:502825‑M2/1‑64 (MQ=255) aTTAAACATCAACACATCATGACGCCGTTCAAGAATAGATGCTTGATTATTACGATATCCCCCCataatc > 1:2006445‑M2/1‑64 (MQ=255) aTTAAACATCAACACATCATGACGCCGTTCAAGAATAGATGCTTGATTATTACGATATCCCCCCataatc > 1:3580384‑M2/1‑64 (MQ=255) aTTAAACATCAACACATCATGACGCCGTTCAAGAATAGATGCTTGATTATTACGATATCCCCCCataatc > 1:1231632‑M2/1‑64 (MQ=255) aTTAAACATCAACACATCATGACGCCGTTCAAGAATAGATGCTTGATTATTACGATATCCCCCCataat > 1:2095915‑M2/1‑64 (MQ=255) ttAAACATCAACACATCATGACGCCGTTCAAGAATAGATGCTTGATTATTACGATATCCCCCCataatcaa > 1:1715490‑M2/1‑63 (MQ=255) aaaCATCAACACATCATGACGCCGTTCAAGAATAGATGCTTGATTATTACGATATCCCCCCATAATCAAt < 1:1376327/70‑1 (MQ=255) aaaCATCAACACATCATGACGCCGTTCAAGAATAGATGCTTGATTATTACGATATCCCCCCATAATCAAt < 1:1725103/70‑1 (MQ=255) aaCATCAACACATCATGACGCCGTTCAAGAATAGATGCTTGATTATTACGATATCCCCCCATAATCAAtt > 1:1121132/1‑70 (MQ=255) aCATCAACACATCATGACGCCGTTCAAGAATAGATGCTTGATTATTACGATATCCCCCCATAATCAATTCa < 1:220801/71‑1 (MQ=255) cATCAACACATCATGACGCCGTTCAAGAATAGATGCTTGATTATTACGATATCCCCCCATAATCAATTCaa < 1:604548/71‑1 (MQ=255) cATCAACACATCATGACGCCGTTCAAGAATAGATGCTTGATTATTACGATATCCCCCCATAATCAATTCaa < 1:600143/71‑1 (MQ=255) aTCAACACATCATGACGCCGTTCAAGAATAGATGCTTGATTATTACGATATCCCCCCat > 1:3007232‑M2/1‑57 (MQ=255) aTCAACACATCATGACGCCGTTCAAGAATAGATGCTTGATTATTACGATATCCCCCCATAATCAATTc > 1:3190670/1‑68 (MQ=255) aTCAACACATCATGACGCCGTTCAAGAATAGATGCTTGATTATTACGATATCCCCCCATAATCAATTc > 1:841402/1‑68 (MQ=255) aTCAACACATCATGACGCCGTTCAAGAATAGATGCTTGATTATTACGATATCCCCCCATAATCAATTc > 1:683352/1‑68 (MQ=255) tCAACACATCATGACGCCGTTCAAGAATAGATGCTTGATTATTACGATATCCCCCCATAATCAATTCAaga < 1:3737473/71‑1 (MQ=255) tCAACACATCATGACGCCGTTCAAGAATAGATGCTTGATTATTACGATATCCCCCCATAATCAATTCAag < 1:3086995/70‑1 (MQ=255) cAACACATCATGACGCCGTTCAAGAATAGATGCTTGATTATTACGATATCCCCCCATAATCAATTCAagag > 1:3059949/1‑71 (MQ=255) cAACACATCATGACGCCGTTCAAGAATAGATGCTTGATTATTACGATATCCCCCCATAATCAATTCAagag > 1:1159547/1‑71 (MQ=255) cAACACATCATGACGCCGTTCAAGAATAGATGCTTGATTATTACGATATCCCCCCATAATCAATTCAaga < 1:381242/70‑1 (MQ=255) aaCACATCATGACGCCGTTCAAGAATAGATGCTTGATTATTACGATATCCCCCCATAATCAATTCAagag < 1:2215429/70‑1 (MQ=255) aaCACATCATGACGCCGTTCAAGAATAGATGCTTGATTATTACGATATCCCCCCATAATCAATTCAagag < 1:25218/70‑1 (MQ=255) aaCACATCATGACGCCGTTCAAGAATAGATGCTTGATTATTACGATATCCCCCCATAATCAATTCAagag > 1:3375597/1‑70 (MQ=255) aaCACATCATGACGCCGTTCAAGAATAGATGCTTGATTATTACGATATCCCCCCATAATCAATTCAagag > 1:1187742/1‑70 (MQ=255) aaCACATCATGACGCCGTTCAAGAATAGATGCTTGATTATTACGATATCCCCCCATAATCAATTCAagag < 1:1166937/70‑1 (MQ=255) aaCACATCATGACGCCGTTCAAGAATAGATGCTTGATTATTACGATATCCCCCCATAATCAATTCAagag < 1:418358/70‑1 (MQ=255) aaCACATCATGACGCAGTTCAAGAATAGATGCTTGATTATTACGATATCCCCCCATAATCAATTCAagag < 1:2300640/70‑1 (MQ=255) catcatGACGCCGTTCTAGAATAGATGCTTGATTATTACGATATCCCCCCATAATCAATTCAAGAGGACtt < 1:383178/71‑1 (MQ=255) catcatGACGCCGTTCAAGAATAGATGCTTGATTATTACGATATCCCCCCATAATCAATTCAAGAGGACtt < 1:1759543/71‑1 (MQ=255) tcatGACGCCGTTCAAGAATAGATGCTTGATTATTACGATATCCCCCCATAATCAATTCAAGAGGACTTTg < 1:3614644/71‑1 (MQ=255) gACGCCGTTCAAGAATAGATGCTTGATTATTACGATATCCCCCCATAATCAATTCAAGAGGACTTTgcggc > 1:1469568/1‑71 (MQ=255) aCGCCGTTCAAGAATAGATGCTTGATTATTACGATATCCCCCCataat < 1:8400‑M2/48‑6 (MQ=255) aCGCCGTTCAAGAATAGATGCTTGATTATTACGATATCCCCCCATAATCAATTCAAGAGGACTTTgcggc < 1:1727394/70‑1 (MQ=255) aCGCCGTTCAAGAATAGATGCTTGATTATTACGATATCCCCCCATAATCAATTCAAGAGGACTTTgcggc < 1:3537337/70‑1 (MQ=255) ttCAAGAATAGATGCTTGATTATTACGATATCCCCCCATAATCAATTCAAGAGGACTTTGCGGCGCAatat < 1:2925223/71‑1 (MQ=255) aaGAATAGATGCTTGATTATTACGATATCCCCCCATAATCAATTCaa < 1:1122018/47‑1 (MQ=255) aaGAATAGATGCTTGATTATTACGATATCCCCCCATAATCAATTCaa < 1:644391/47‑1 (MQ=255) aaGAATAGATGCTTGATTATTACGATATCCCCCCATAATCAATTCAAGAGGACTTTGCGGCGCAATAttt < 1:1587170/70‑1 (MQ=255) aaGAATAGATGCTTGATTATTACGATATCCCCCCATAATCAATTCAAGAGGACTTTGCGGCGCAATAttt < 1:3362017/70‑1 (MQ=255) aaGAATAGATGCTTGATTATTACGATATCCCCCCATAATCAATTCAAGAGGACTTTGCGGCGCAATAttt < 1:3017533/70‑1 (MQ=255) aaGAATAGATGCTTGATTATTACGATATCCCCCCATAATCAATTCAAGAGGACTTTGCGGCGCAATAttt < 1:2464532/70‑1 (MQ=255) aGAATAGATGCTTGATTATTACGATATCCCCCCATAATCAATTCAAGAGGACTTTGCGGCGCAATAttt < 1:658361/69‑1 (MQ=255) aGAATAGATGCTTGATTATTACGATATCCCCCCATAATCAATTCAAGAGGACTTTGCGGCGCAATATTTCt < 1:3252740/71‑1 (MQ=255) aGAATAGATGCTTGATTATTACGATATCCCCCCATAATCAATTCAAGAGGACTTTGCGGCGCAATATTTCt < 1:2374498/71‑1 (MQ=255) gAATAGATGCTTGATTATTACGATATCCCCCCATAATCAATTCAAGAGGACTTTGCGGCGCAATATTTCTg < 1:76680/71‑1 (MQ=255) gAATAGATGCTTGATTATTACGATATCCCCCCATAATCAATTCAAGAGGACTTTGCGGCGCAATATTTCTg < 1:451542/71‑1 (MQ=255) gATGCTTGATTATTACGATATCCCCCCATAATCAATTCAAGAGGACTTTGCGGCGCAATATTTCTGAAtt < 1:2196472/70‑1 (MQ=255) aTGCTTGATTATTACGATATCCCCCCATAATCAATTCAAGAGGAc < 1:2557890/45‑1 (MQ=255) aTGCTTGATTATTACGATATCCCCCCATAATCAATTCAAGAGGAc < 1:721040/45‑1 (MQ=255) tGCTTGATTATTACGATATCCCCCCATAATCAATTCAAGAGGACTTTGCGGCGCAATATTTCTGAATTGAt < 1:1338400/71‑1 (MQ=255) ttGATTATTACGATATCCCCCCATAATCAATTCAAGAGGACTTTGCGGCGCa > 1:3296035/1‑52 (MQ=255) tGATTATTACGATATCCCCCCATAATCAATTCAAGAGGACTTTGCGGCGCAATATTTCTGAATTGATTca > 1:391803/1‑70 (MQ=255) gATTATTACGATATCCCCCCataatcaagcatctattcttgaacggcgtcatgatgtgttg < 1:1992182‑M2/61‑42 (MQ=255) attattACGATATCCCCCCataatcaagcatctattcttgaacggcgtcatga < 1:2393569‑M2/53‑35 (MQ=255) ttattaCGATATCCCCCCataatcaagcatctattctt < 1:3087170‑M2/38‑21 (MQ=255) ttattaCGATATCCCCCCataatcaagcatctattctt < 1:2196518‑M2/38‑21 (MQ=255) ttattaCGATATCCCCCCataatcaagcatctattctt < 1:2818211‑M2/38‑21 (MQ=255) ttattaCGATATCCCCCCataatcaagcatctattctt < 1:3304269‑M2/38‑21 (MQ=255) ttattaCGATATCCCCCCataatcaagcatctattct < 1:1941300‑M2/37‑20 (MQ=255) ttattaCGATATCCCCCCATAATCAATTCAAGAGGACTTTGCGGCGCAATATTTCTGAATTGATTCACAAc > 1:2039669/1‑71 (MQ=255) ttattaCGATATCCCCCCATAATCAATTCAAGAGGACTTTGCGGCGCAATATTTCTGAATTGATTCACAAc > 1:3463221/1‑71 (MQ=255) tattaCGATATCCCCCCATAATCAATTCAAGAGGACTTTGCGGCGCAATATTTCTGAATTGATTCACAAcc > 1:2821756/1‑71 (MQ=255) cGATATCCCCCCATAATCAATTCAAGAGGACTTTGCGGCGCAATATTTCTGAATTGATTCACAACcgccgc < 1:2089655/71‑1 (MQ=255) atCCCCCCATAATCAATTCAAGAGGACTTTGCGGCGCAATATTTCTGAATTGATTCACAAccgc > 1:1448393/1‑64 (MQ=255) tCCCCCCATAATCAATTCAAGAGGACTTTGCGGCGCAATATTTCTGAATTGATTCACAACCGCCGCCAcgc < 1:3315137/71‑1 (MQ=255) cccccATAATCAATTCAAGAGGACTTTGCGGCGCAATATTTCTGAATTGATTCACAACCGCCGCCAcgcg < 1:1303323/70‑1 (MQ=255) | CCCTGATTAAACATCAACACATCATGACGCCGTTCAAGAATAGATGCTTGATTATTACGATATCCCCCCATAATCAATTCAAGAGGACTTTGCGGCGCAATATTTCTGAATTGATTCACAACCGCCGCCACGCG > minE/1852512‑1852645 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |