| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | = 1903687 | 46 (0.780) | 10 (0.200) | 3/86 | NT | 20.5% | coding (2235/2889 nt) | ptr | protease III |
| ? | minE | = 1903712 | 39 (0.780) | coding (2210/2889 nt) | ptr | protease III | |||||
GCTGCCAGTGCGGAGTCGGTGCTGTTACCGGCTTTTTCAAAGATGACGGATTGTTTTTTATCGACCACTACATCTTTGTTTCGACACCACTCTGAACCATCAGCGCCCAACTGTTTTTGCACATCGCGTGCCAGCGTT > minE/1903643‑1903780 | gCTGCCAGTGCGGAGTCGGTGCTGTTACCGGCTTTTTCAAAGATGACGGATTGTTTTTTATCGACCACTa > 1:1572464/1‑70 (MQ=255)gCTGCCAGTGCGGAGTCGGTGCTGTTACCGGCTTTTTCAAAGATGACGGATTGTTTTTTATCGACCACTAc > 1:489205‑M2/1‑70 (MQ=255) cAGTGCGGAGTCGGTGCTGTTACCGGCTTTTTCAAAGATGACGGATTGTTTTTTATCGACCACTAcatctt < 1:1087775‑M2/71‑7 (MQ=255) cAGTGCGGAGTCGGTGCTGTTACCGGCTTTTTCAAAGATGACGGATTGTTTTTTATCGACCACTAcatctt < 1:669908‑M2/71‑7 (MQ=255) tGCGGAGTCGGTGCTGTTACCGGCTTTTTCAAAGATGACGGATTGTTTTTTATCGACCACTACATCTTTGt < 1:2549266/71‑1 (MQ=255) tGCGGAGTCGGTGCTGTTACCGGCTTTTTCAAAGATGACGGATTGTTTTTTATCGACCACTACATCTTTGt < 1:870303/71‑1 (MQ=255) tGCGGAGTCGGTGCTGTTACCGGCTTTTTCAAAGATGACGGATTGTTTTTTATCGACCACTACATCTTTGt < 1:2691328/71‑1 (MQ=255) tGCGGAGTCGGTGCTGTTACCGGCTTTTTCAAAGATGACGGATTGTTTTTTATCGACCACTACATCTTTGt < 1:2772333/71‑1 (MQ=255) cGGAGTCGGTGCTGTTACCGGCTTTTTCAAAGATGACGGATTGTTTTTTATCGACCACTACATCTTTGttt > 1:2357139/1‑71 (MQ=255) cGGAGTCGGTGCTGTTACCGGCTTTTTCAAAGATGACGGATTGTTTTTTATCGACCACTACATCTTTGtt < 1:3588854/70‑1 (MQ=255) gAGTCGGTGCTGTTACCGGCTTTTTCAAAGATGACGGATTGTTTTTTATCGACCACTACATCTTTGTTTc > 1:2269269/1‑70 (MQ=255) gCTGTTACCGGCTTTTTCAAAGATGACGGATTGTTTTTTATCGACCACTACATCTTTGTTTCGACACCAct > 1:3187826/1‑71 (MQ=255) gTTACCGGCTTTTTCAAAGATGACGGATTGTTTTTTATCGACCACTACATCTTTGTTTc < 1:1072897/59‑1 (MQ=255) ttACCGGCTTTTTCAAAGATGACTGATTGTTTTTTATCGACCACTACATCTTTGTTTCGACACCACTCTg < 1:2990153/70‑1 (MQ=255) ttACCGGCTTTTTCAAAGATGACGGATTGTTTTTTATCGACCACTACATCTTTGTTTCGACACCACTCTg < 1:956143/70‑1 (MQ=255) ttACCGGCTTTTTCAAAGATGACGGATTGTTTTTTATCGACCACTACATCTTTGTTTCGACACCACTCTGa < 1:2613816/71‑1 (MQ=255) ccGGCTTTTTCAAAGATGACGGATTGTTTTTTATCGACCACTACATCTTTGTTTCGa > 1:1706555/1‑57 (MQ=255) ccGGCTTTTTCAAAGATGACGGATTGTTTTTTATCGACCACTACATCTTTGTTTCGa > 1:1611393/1‑57 (MQ=255) ccGGCTTTTTCAAAGATGACGGATTGTTTTTTATCGACCACTACATCTTTGTTTCGACACCACTCTGAAcc < 1:1534355/71‑1 (MQ=255) cGGCTTTTTCAAAGATGACGGATTGTTTTTTATCGACCACTACATCTTTGTTTCGACACCACTCTGaa > 1:1026532/1‑68 (MQ=255) ggCTTTTTCAAAGATGACGGATTGTTTTTTATCGACCACTACATCTTTGTTTCGACACCACTCTGAACCAt < 1:904460/71‑1 (MQ=255) gCTTTTTCAAAGATGACGGATTGTTTTTTATCGACCACTAcatcttt < 1:3457315‑M2/47‑8 (MQ=255) gCTTTTTCAAAGATGACGGATTGTTTTTTATCGACCACTACATCTTTGTTTCGACACCACTCTGaa > 1:2233530/1‑66 (MQ=255) gCTTTTTCAAAGATGACGGATTGTTTTTTATCGACCACTACATCTTTGTTTCGACACCACTCTGaa > 1:1899838/1‑66 (MQ=255) gCTTTTTCAAAGATGACGGATTGTTTTTTATCGACCACTACATCTTTGTTTCGACACCACTCTGAACCATc < 1:2581715/71‑1 (MQ=255) cTTTTTCAAAGATGACGGATTGTTTTTTATCGACCACTACATCTTTGTTTCGACACCACTCTGAACCAt < 1:1885135/69‑1 (MQ=255) tttttCAAAGATGACGGATTGTTTTTTATCGACCACTACATCTTTGTTTCGACACCACTCTGAACCAt < 1:2266187/68‑1 (MQ=255) tttCAAAGATGACGGATTGTTTTTTATCGACCACTACATCTTTGTTTCGACACCACTCTGAACCATCAgcg > 1:344665/1‑71 (MQ=255) tCAAAGATGACGGATTGTTTTTTATCGACCACTACATCTTTGTTTCGACACCACTCTGAACCATCAGCGcc > 1:2555611/1‑71 (MQ=255) tCAAAGATGACGGATTGTTTTTTATCGACCACTACATCTTTGTTTCGACACCACTCTGAACCATCAGCGcc > 1:3594192/1‑71 (MQ=255) tCAAAGATGACGGATTGTTTTTTATCGACCACTACATCTTTGTTTCGACACCACTCTGAACCATCAGCGcc > 1:3598468/1‑71 (MQ=255) tCAAAGATGACGGATTGTTTTTTATCGACCACTACATCTTTGTTTCGACACCACTCTGAACCATCAGCGcc > 1:1418893/1‑71 (MQ=255) aaaGATGACGGATTGTTTTTTATCGACCACTACATCTTTGTTTCGac < 1:494847/47‑1 (MQ=255) aaaGATGACGGATTGTTTTTTATCGACCACTACATCTTTGTTTCGac < 1:30594/47‑1 (MQ=255) aaaGATGACGGATTGTTTTTTATCGACCACTACATCTTTGTTTCGACACCACTCTGAACCATCAGCGccc < 1:2648986/70‑1 (MQ=255) aGATGACGGATTGTTTTTTATCGACCACTAcatctttgaaaaagccggtaacagcaccga < 1:2432670‑M2/60‑31 (MQ=255) aGATGACGGATTGTTTTTTATCGACCACTAcatctttgaaaaagccggtaacagcaccga < 1:3547976‑M2/60‑31 (MQ=255) aGATGACGGATTGTTTTTTATCGACCACTAcatctttgaaaaagccggtaacagcaccga < 1:3459517‑M2/60‑31 (MQ=255) aGATGACGGATTGTTTTTTATCGACCACTAcatctttgaaaaagccggtaacagcaccga < 1:2737271‑M2/60‑31 (MQ=255) aGATGACGGATTGTTTTTTATCGACCACTAcatctttgaaaaagccggtaacagcaccga < 1:54565‑M2/60‑31 (MQ=255) gACGGATTGTTTTTTATCGACCACTACATCTTTGTTTCGACACCAct < 1:1088436/47‑1 (MQ=255) cGGATTGTTTTTTATCGACCACTACATCTTTGTTTCGACACCActct > 1:3585215/1‑47 (MQ=255) cGGATTGTTTTTTATCGACCACTACATCTTTGTTTCGACACCACTCTGAACCATCAGCGCCCAACTGttt > 1:1015082/1‑70 (MQ=255) gATTGTTTTTTATCGACCATTACATCTTTGTTTCGACACCACTCTGAACCATCa > 1:242881/1‑54 (MQ=255) gATTGTTTTTTATCGACCACTAcatctttgaaaaagccg > 1:2088551‑M2/1‑22 (MQ=255) gATTGTTTTTTATCGACCACTAcatctttgaaaaagccg > 1:2188590‑M2/1‑22 (MQ=255) gATTGTTTTTTATCGACCACTACATCTTTGTTTCGACACCACTCTGAACCAt < 1:2711732/52‑1 (MQ=255) gATTGTTTTTTATCGACCACTACATCTTTGTTTCGACACCACTCTGAACCATCa > 1:618795/1‑54 (MQ=255) ttGTTTTTTATCGACCACTAcatctttgaaaaagccggt < 1:750006‑M2/39‑20 (MQ=255) ttGTTTTTTATCGACCACTAcatctttgaaaaagccggt < 1:994399‑M2/39‑20 (MQ=255) ttGTTTTTTATCGACCACTAcatctttgaaaaagccggt < 1:2188023‑M2/39‑20 (MQ=255) ttttttATCGACCACTACATCTTTGTTTCGACACCACTCTGAACCATCAGCGCCCAACTGttttt > 1:1566663/1‑65 (MQ=255) ttttttATCGACCACTACATCTTTGTTTCGACACCACTCTGAACCATCAGCGCCCAACTGttttt > 1:3413168/1‑65 (MQ=255) ttttttATCGACCACTACATCTTTGTTTCGACACCACTCTGAACCATCAGCGCCCAACTGttttt > 1:2608940/1‑65 (MQ=255) ttttttATCGACCACTACATCTTTGTTTCGACACCACTCTGAACCATCAGCGCCCAACTGttttt > 1:882129/1‑65 (MQ=255) ttttttATCGACCACTACATCTTTGTTTCGACACCACTCTGAACCATCAGCGCCCAACTGTTTTTGCACAt > 1:3642349/1‑71 (MQ=255) ttttATCGACCACTACATCTTTGTTTCGACACCACTCTGAACCATCAGCGCCCAACTGtt < 1:1858183/60‑1 (MQ=255) ttttATCGACCACTACATCTTTGTTTCGACACCACTCTGAACCATCAGCGCCCAACTGtt < 1:1862634/60‑1 (MQ=255) tttATCGACCACTACATCTTTGTTTCGACACCACTCTGAACCATCAGCGCCCAACTGTTTTTg > 1:2376020/1‑63 (MQ=255) tttATCGACCACTACATCTTTGTTTCGACACCACTCTGAACCATCAGCGCCCAACTGTTTTTGCACATcgc > 1:697871/1‑71 (MQ=255) ttATCGACCACTACATCTTTGTTTCGACACCACTCTGAACCATCAGCGCCCAACTGTTTTTGCACATcgc < 1:1636287/70‑1 (MQ=255) gACCACTACATCTTTGTTTCGACACCACTCTGAACCATCAGCGCCCAACTGTTTTTGCACATCGCGTGcc < 1:2516490/70‑1 (MQ=255) cACTACATCTTTGTTTCGACACCACTCTGAACCATCAGCGCCCAACTGTTTTTGCACATCGCGTGCCAGc > 1:2419973/1‑70 (MQ=255) cACTACATCTTTGTTTCGACACCACTCTGAACCATCAGCGCCCAACTGTTTTTGCACATCGCGTGCCAGCg < 1:75892/71‑1 (MQ=255) cTACATCTTTGTTTCGACACCACTCTGAACCATCAGCGCCCAACTGTTTTTGCACATCGCGTGCCAGCgtt < 1:280362/71‑1 (MQ=255) cTACATCTTTGTTTCGACACCACTCTGAACCATCAGCGCCCAACTGTTTTTGCACATCGCGTGCCAGCgt < 1:811249/70‑1 (MQ=255) cTACATCTTTGTTTCGACACCACTCTGAACCATCAGCGCCCAACTGTTTTTGCACATCGCGTGCCAGCgt < 1:2709146/70‑1 (MQ=255) cTACATCTTTGTTTCGACACCACTCTGAACCATCAGCGCCCAACTGTCTTTGCACATCGCGTGCCAGCgt > 1:573595/1‑70 (MQ=255) aCATCTTTGTTTCGACACCACTCTGAACCATCAGCGCCCAAc > 1:3633620/1‑42 (MQ=255) aCATCTTTGTTTCGACACCACTCTGAACCATCAGCGCCCAAc > 1:2255303/1‑42 (MQ=255) | GCTGCCAGTGCGGAGTCGGTGCTGTTACCGGCTTTTTCAAAGATGACGGATTGTTTTTTATCGACCACTACATCTTTGTTTCGACACCACTCTGAACCATCAGCGCCCAACTGTTTTTGCACATCGCGTGCCAGCGTT > minE/1903643‑1903780 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |