| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | 1940973 = | 45 (0.760) | 7 (0.120) | 4/100 | NT | 14.3% | coding (393/981 nt) | ygfZ | predicted folate‑dependent regulatory protein |
| ? | minE | 1941002 = | 40 (0.690) | coding (422/981 nt) | ygfZ | predicted folate‑dependent regulatory protein | |||||
TGTTGCCGGTTTTCAGGCGCGCGCCGCGCTGGCAAATCTCTTTAGCGAACTGCCTTCGAAAGAAAAACAGGTAGTCAAAGAAGGCGCGACCACTTTGCTATGGTTTGAACACCCGGCAGAACGTTTCCTGATCGTA > minE/1940937‑1941072 | tgtTGCCGGTTTTCAGGCGCGCGCCGCGCTGGCAAATCTCTTTAGCGAACTGCCTTCGAAAGAAAAACAgg < 1:201619/71‑1 (MQ=255) gCCGGTTTTCAGGCGCGCGCCGCGCTGGCAAATCTCTTTAGCGAACTGCCTTCGAAAGAAAAACAGGTAGt > 1:3053223/1‑71 (MQ=255) ccGGTTTTCAGGCGCGCGCCGCGCTGGCAAATCTCTTTAGCGAACTGCCTTCGAAAGAAAAACAGGTa < 1:218178/68‑1 (MQ=255) gTTTTCAGGCGCGCGCCGCGCTGGCAAATCTCTTTAGCGAACTGCCTTCGAAAGAAAAACAGGTAGTCa > 1:610698/1‑69 (MQ=255) gTTTTCAGGCGCGCGCCGCGCTGGCAAATCTCTTTAGCGAACTGCCTTCGAAAGAAAAACAGGTAGTCa > 1:1926915/1‑69 (MQ=255) ttttCAGGCGCGCGCCGCGCTGGCAAATCTCTTTAGCGAACTGCCTTCGAAAGAAAAACAGGTAGTCa > 1:3048760/1‑68 (MQ=255) ttttCAGGCGCGCGCCGCGCTGGCAAATCTCTTTAGCGAACTGCCTTCGAAAGAAAAACAGGTAGTCa > 1:1624025/1‑68 (MQ=255) ttttCAGGCGCGCGCCGCGCTGGCAAATCCCTTTAGCGAACTGCCTTCGAAAGAAAAACAGGTAGTCa > 1:2200391/1‑68 (MQ=255) ttCAGGCGCGCGCCGCGCTGGCAAATCTCTTTAGCGAACTGCCTTCGAAAGAAAAACAGGTAGTCAaaga < 1:1576769/70‑1 (MQ=255) gcgcgcgcCGCGCTGGCAAATCTCTTTAGCGAACTGCCTTCGAAAGAAAAACAgg < 1:414001/55‑1 (MQ=255) gcgcgcgcCGCGCTGGCAAATCTCTTTAGCGAACTGCCTTCGAAAGAAAAACAGGTAGTCAAAGAAGgcgc > 1:201651/1‑71 (MQ=255) cgccgcgcTGGCAAATCTCTTTAGCGAACTGCCTTCGAAAGAAAAACAGGTAGTCa > 1:842304/1‑56 (MQ=255) gccgcgcTGGCAAATCTCTTTAGCGAACTGCCTTCGAAAGAAAAACAGGTAGTCAaaga < 1:2423201/59‑1 (MQ=255) gccgcgcTGGCAAATCTCTTTAGCGAACTGCCTTCGAAAGAAAAACAGGTAGTCAaaga < 1:1483063/59‑1 (MQ=255) cgcgcTGGCAAATCTCTTTAGCGAACTGCCTTCGAAAGAAAAACAGGTAGTCAAAGAAGGCGCGACCACtt < 1:1345892/71‑1 (MQ=255) cgcTGGCAAATCTCTTTAGCGAACTGCCTTCGAAAGAAAAACAGGTAGTCAAAGAAGGCGCGACCACTTTg > 1:955389/1‑71 (MQ=255) gcTGGCAAATCTCTTTAGCGAACTGCCTTCGAAAGaaaa < 1:1676450/39‑1 (MQ=255) cTGGCAAATCTCTTTAGCGAACTGCCTTCGAAAGAAAAACAGGTAGTCAAAGAAGGCGCGACCACTTTGc > 1:1953706/1‑70 (MQ=255) cTGGCAAATCTCTTTAGCGAACTGCCTTCGAAAGAAAAACAGGTAGTCAAAGAAGGCGCGACCACTTTGc > 1:2702329/1‑70 (MQ=255) gCAAATCTCTTTAGCGAACTGCCTTCGAAAGAAAAACAGGTAGTCAAAGAAGGCGCGACCACTTTGCTATg > 1:1802664/1‑71 (MQ=255) cAAATCTCTTTAGCGAACTGCCTTCGAAAGAAAAACAGGTAGTCAaaga < 1:1703088/49‑1 (MQ=255) cAAATCTCTTTAGCGAACTGCCTTCGAAAGAAAAACAGGTAGTCAaaga < 1:811256/49‑1 (MQ=255) cAAATCTCTTTAGCGAACTGCCTTCGAAAGAAAAACAGGTAGTCAaaga < 1:2944086/49‑1 (MQ=255) aaaTCTCTTTAGCGAACTGCCTTCGAAAGAAAAACAGGTAGTCaa < 1:3121095/45‑1 (MQ=255) aTCTCTTTAGCGAACTGCCTTCGAAAGAAAAACAGGTAGTCAaagaag > 1:154256/1‑48 (MQ=255) aTCTCTTTAGCGAACTGCCTTCGAAAGAAAAACAGGTAGTCAAAGAAGGCGCGACCACTTTGCTATGGttt < 1:1327126/71‑1 (MQ=255) tttctttcgaaggcagttcgctaaagagaAACAGGTAGTCAAAGAAGgc < 1:1849897‑M2/20‑1 (MQ=255) TCTCTTTAGCGAACTGCGTTCGAAAGAAAAACAGGTAGTCAAAGAAGGCGCGACCACTTTGCTATGGttt < 1:3196449‑M1/70‑1 (MQ=255) ctctTTAGCGAACTGCCTTCGAAAGAAAAACAGGTAg < 1:1391843/37‑1 (MQ=255) tctttcgaaggcagttcgctaaagagaAACAGGTAGTCaaa > 1:3435316‑M2/28‑41 (MQ=255) tctttcgaaggcagttcgctaaagagaAACAGGTAGTCAAAGAAGGCGCGACCACTTTGCTATGGTTTGaa > 1:1125085‑M2/28‑71 (MQ=255) tctttcgaaggcagttcgctaaagagaAACAGGTAGTCAAAGAAGGCGCGACCACTTTGCTATGGTTTGaa > 1:1276272‑M2/28‑71 (MQ=255) tctTTAGCGAACTGCCTTCGAAAGAAAATCATGTAGTCTAAGAAgg < 1:1160633/46‑1 (MQ=38) tttAGCGAACTGCCTTCGAAAGAAAAACAGGTAGTCAAAGAAGGCGCGACCACTTTGCTATGGTTTg < 1:1650567/67‑1 (MQ=255) ttAGCGAACTGCCTTCGAAAGAAAAACAGGTAGTCAAAGAAGGCGCGACCACTTTGCTATGGTTTGAacac > 1:1968259/1‑71 (MQ=255) ttAGCGAACTGCCTTCGAAAGAAAAACAGGTAGTCAAAGAAGGCGCGACCACTTTGCTATGGTTTGAacac > 1:163714/1‑71 (MQ=255) tcgaaggcagttcgctaaagagaAACAGGTAGTCAAAGAAGGCGCGACCACTTTGCTATGGTTTGAACAcc > 1:56594‑M2/24‑71 (MQ=255) tcgaaggcagttcgctaaagagaAACAGGTAGTCAAAGAAGGCGCGACCACTTTGCTATGGTTTGAACAcc > 1:259045‑M2/24‑71 (MQ=255) tAGCGAACTGCCTTCGAAAGAAAAACAGGTAGTCAAAGAAGGCGCGACCACTTTGCTATGGTTTGAacac < 1:981382/70‑1 (MQ=255) aGCGAACTGCCTTCGAAAGAAAAACAGGTAGTCAAAGAAGGCGCAACCACTTTGCTATGGtt < 1:498087/62‑1 (MQ=255) gAACTGCCTTCGAAAGAAAAACAGGTAGTCAAAGAAGGCGCGACCACtt < 1:398501/49‑1 (MQ=255) aCTGCCTTCGAAAGAAAAACAGGTAGTCAAAGAAGGCGCGACCACTTTGCTATGGTTTGAACACCCGGCAg < 1:225745/71‑1 (MQ=255) aCTGCCTTCGAAAGAAAAACAGGTAGTCAAAGAAGGCGCGACCACTTTGCTATGGTTTGAACACCCGGCAg < 1:903680/71‑1 (MQ=255) cTGCCTTCGAAAGAAAAACAGGTAGTCAAAGAAGGCGCGACCACTTTGCTATGGTTTGAACACCCGGCAGa < 1:1961854/71‑1 (MQ=255) ttCGAAAGAAAAACAGGTAGTCAAAGAAGGCGCGAc > 1:898819/1‑36 (MQ=255) tCGAAAGAAAAACAGGTAGTCAAAGAAGGCGCGACCACTTTGCTATGGTTTGAACACCCg < 1:3720965/60‑1 (MQ=255) tCGAAAGAAAAACAGGTAGTCAAAGAAGGCGCGACCACTTTGCTATGGTTTGAACACCCg < 1:858458/60‑1 (MQ=255) tCGAAAGAAAAACAGGTAGTCAAAGAAGGCGCGACCACTTTGCTATGGTTTGAACACCCGGCAGAACGttt > 1:1928024/1‑71 (MQ=255) ctaaagagaAACAGGTAGTCAAAGAAGGCGCGACCACTTTGCTATGGTTTGAACACCCGGCAGAACGTTTc < 1:3378777‑M2/62‑1 (MQ=255) agaaaAACAGGTAGTCAAAGAAGGCGCGACCACTTTGCTATGGTTTGAACACCCGGCAGAACGTTTCCTGa < 1:95896/71‑1 (MQ=255) agaaaAACAGGTAGTCAAAGAAGGCGCGACCACTTTGCTATGGTTTGAACACCCGGCAGAACGTTTCCTGa > 1:3083917/1‑71 (MQ=255) gaaaAACAGGTAGTCAAAGAAGGCGCGACCACTTTGCTATGGTTTGAACACCCGGCAGAACGTTTc > 1:2253327/1‑66 (MQ=255) gaaaAACAGGTAGTCAAAGAAGGCGCGACCACTTTGCTATGGTTTGAACACCCGGCAGAACGTTTc > 1:71855/1‑66 (MQ=255) gaaaAACAGGTAGTCAAAGAAGGCGCGACCACTTTGCTATGGTTTGAACACCCGGCAGAACGTTTc > 1:3519954/1‑66 (MQ=255) aaaaaCAGGTAGTCAAAGAAGGCGCGACCACTTTGCTATGGTTTGAACACCCGGCAGAACGTTTCCTGATc > 1:384994/1‑71 (MQ=255) aAACAGGTAGTCAAAGAAGGCGCGACCACTTTGCTATGGTTTGAACACCCGGCAGAACGTTTCCTGATCg > 1:564720‑M2/2‑70 (MQ=255) aaCAGGTAGTCAAAGAAGGCGCGACCACTTTGCTATGGTTTGAACACCCGGCAGAACGttt < 1:2957523/61‑1 (MQ=255) aaCAGGTAGTCAAAGAAGGCGCGACCACTTTGCTATGGTTTGAACACCCGGCAGAACGTTTCCTGATCGTa < 1:3546083/71‑1 (MQ=255) aaCAGGTAGTCAAAGAAGGCGCGACCACTTTGCTATGGTTTGAACACCCGGCAGAACGTTTCCTGATCGTa < 1:1645834/71‑1 (MQ=255) | TGTTGCCGGTTTTCAGGCGCGCGCCGCGCTGGCAAATCTCTTTAGCGAACTGCCTTCGAAAGAAAAACAGGTAGTCAAAGAAGGCGCGACCACTTTGCTATGGTTTGAACACCCGGCAGAACGTTTCCTGATCGTA > minE/1940937‑1941072 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |