| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | = 2266492 | 44 (0.750) | 8 (0.150) | 3/92 | NT | 14.0% | intergenic (‑49/+66) | tufB/thrT | protein chain elongation factor EF‑Tu/tRNA‑Thr |
| ? | minE | = 2266511 | 59 (1.110) | intergenic (‑68/+47) | tufB/thrT | protein chain elongation factor EF‑Tu/tRNA‑Thr | |||||
CATCGATTGTCCCTCTAAGACACGGATAAATCGGTGATATCACCACATCAACCAGGCAACATGCCCGACTTGTTGAATGCAATAAACAGAAGGAAAAAACAGGGAGGAGAAAAGAAGTGGTGCTGATAGGCAGATTCG > minE/2266441‑2266578 | cATCGATTGTCCCTCTAAGACACGGATAAATCGGTGATATCACCACATCAACCAGGCAACATGCCCGACtt < 1:760258/71‑1 (MQ=255) aTCGATTGTCCCTCTAAGACACGGATAAATCGGTGATATCACCACATCAACCAGGCAACATGCCCGACtt < 1:271212/70‑1 (MQ=255) aTCGATTGTCCCTCTAAGACACGGATAAATCGGTGATATCACCACATCAACCAGGCAACATGCCCGACtt < 1:702624/70‑1 (MQ=255) aTCGATTGTCCCTCTAAGACACGGATAAATCGGTGATATCACCACATCAACCAGGCAACATGCCCGACTTg > 1:1073021‑M2/1‑70 (MQ=255) cGATTGTCCCTCTAAGACACGGATAAATCGGTGATATCACCACATCAACCAGGCAACATGCCCGACTTgtt < 1:178808‑M2/71‑4 (MQ=255) cGATTGTCCCTCTAAGACACGGATAAATCGGTGATATCACCACATCAACCAGGCAACATGCCCGACTTgtt < 1:2624860‑M2/71‑4 (MQ=255) cGATTGTCCCTCTAAGACACGGATAAATCGGTGATATCACCACATCAACCAGGCAACATGCCCGACTTgtt < 1:524050‑M2/71‑4 (MQ=255) gATTGTCCCTCTAAGACACGGATAAATCGGTGATATCACCACATCAACCAGGCAACATGCCCGACTTgttg > 1:2245179‑M2/1‑67 (MQ=255) aTTGTCCCTCTAAGACACGGATAAATCGGTGATATCACCACATCAACCAGGCAACATGCCCGACTTgttga > 1:1274284‑M2/1‑66 (MQ=255) aTTGTCCCTCTAAGACACGGATAAATCGGTGATATCACCACATCAACCAGGCAACATGCCCGACTTgttga > 1:1879598‑M2/1‑66 (MQ=255) ttGTCCCTCTAAGACACGGATAAATCGGTGATATCACCACATCAACCAGGCAACATGCCCGACTTGTTGaa < 1:3610507/71‑1 (MQ=255) ttGTCCCTCTAAGACACGGATAAATCGGTGATATCACCACATCAACCAGGCAACATGCCCGACTTGTTGaa < 1:2152438/71‑1 (MQ=255) cccTCTAAGACACGGATAAATCGGTGATATCACCACATCAACCAGGCAACATGCCCGACTTGTTGAATGc > 1:940040/1‑70 (MQ=255) ctctAAGACACGGATAAATCGGTGATATCACCACATCAACCAGGCAACATGCCCGACTTGTTGAATg > 1:1311111/1‑67 (MQ=255) tctAAGACACGGATAAATCGGTGATATCACCACATCAACCAGGCAACATGCCCGACTTgtt > 1:549654‑M2/1‑58 (MQ=255) tctAAGACACGGATAAATCGGTGATATCACCACATCAACCAGGCAACATGCCCGACTTgtt > 1:828433‑M2/1‑58 (MQ=255) tctAAGACACGGATAAATCGGTGATATCACCACATCAACCAGGCAACATGCCCGACTTgtt > 1:3501909‑M2/1‑58 (MQ=255) tAAGACACGGATAAATCGGTGATATCACCACATCAACCTGGCAACATGCCCGACTTGTTGAATGCAATaaa > 1:1386954/1‑71 (MQ=255) aaGACACGGATAAATCGGTGATATCACCACATCAACCAGGCAACATGCCCGACTTGTTGAATGCAATaaa > 1:3437244/1‑70 (MQ=255) gACACGGATAAATCGGTGATATCACCACATCAACCAGGCAACATGCCCGACTTGTTGAATGCAATAAACAg < 1:549283/71‑1 (MQ=255) gACACGGATAAATCGGTGATATCACCACATCAACCAGGCAACATGCCCGACTTGTTGAATGCAATAAACAg < 1:116202/71‑1 (MQ=255) acacGGATAAATCGGTGATATCACCACATCAACCAGGCAACATGCCCGACTTgttg > 1:3014148‑M2/1‑52 (MQ=255) acacGGATAAATCGGTGATATCACCACATCAACCAGGCAACATGCCCGACTTgttg > 1:2656496‑M2/1‑52 (MQ=255) acacGGATAAATCGGTGATATCACCACATCAACCAGGCAACATGCCCGACTTGTTGAATGCAATAAACa < 1:2274756/69‑1 (MQ=255) ggATAAATCGGTGATATCACCACATCAACCAGGCAACATGCCCGACTTGTTGAATGCAATAAACAGAAgg > 1:3296910/1‑70 (MQ=255) gATAAATCGGTGATATCACCACATCAACCAGGCAACATGCCCGACTTGTTGAATGCAATAAACAg < 1:1680512/65‑1 (MQ=255) gATAAATCGGTGATATCACCACATCAACCAGGCAACATGCCCGACTTGTTGAATGCAATAAACAg < 1:1727430/65‑1 (MQ=255) aTAAATCGGTGATATCACCACATCAACCAGGCAACATGCCCGACTTGTTGAATGCAATAAACAGAAGGaa > 1:3614334/1‑70 (MQ=255) tAAATCGGTGATATCACCACATCAACCAGGCAACATGCCCGACTTGTTGAATGCAATAAACAGAAGGaaaa < 1:2040060/71‑1 (MQ=255) aaaTCGGTGATATCACCACATCAACCAGGCAACATGCCCGACTTGTTGAATGcaacaa < 1:1598684/58‑1 (MQ=255) aaaTCGGTGATATCACCACATCAACCAGGCAACATGCCCGACTTGTTGAATGCAATaa < 1:1195267/58‑1 (MQ=255) aaaTCGGTGATATCACCACATCAACCAGGCAACATGCCCGACTTGTTGAATGCAATaa < 1:2343355/58‑1 (MQ=255) aaaTCGGTGATATCACCACATCAACCAGGCAACATGCCCGACTTGTTGAATGCAATaa < 1:1288445/58‑1 (MQ=255) aTCGGTGATATCACCACATCAACCAGGCAACATGCCCGACTTGTTGAATGCAATAAACAGAATGaaaaaa < 1:2973943/70‑1 (MQ=255) ggTGATATCACCACATCAACCAGGCAACATGCCCGACTTGTTGAATGCAATAAACAGAAGGAAAAAACAgg > 1:3047377/1‑71 (MQ=255) tatCACCACATCAACCAGGCAACATGCCCGACTTGTTGAATGTAATAAACAGAAGGAAAAAACAGggag > 1:2763077/1‑69 (MQ=255) tatCACCACATCAACCAGGCAACATGCCCGACTTGTTGAATGTAATAAACAGAAGGAAAAAACAGggag > 1:217643/1‑69 (MQ=255) atCACCACATCAACCAGGCAACATGCCCGACTTGTTGAATGCAATAAACAGAAGGAAAAAACAGggag > 1:3318177/1‑68 (MQ=255) tCACCACATCAACCAGGCAACATGCCCGACTTGTTGAATGCAATAAACAGAAGGAAAAAACAGGgaggag < 1:1907481/70‑1 (MQ=255) tCACCACATCAACCAGGCAACATGCCCGACTTGTTGAATGCAATAAACAGAAGGAAAAAACAGGGAGgaga < 1:3360100/71‑1 (MQ=255) ccacATCAACCAGGCAACATGCCCGACTTgttgatgtggtgatatcaccgatttatccgtgtcttagagg < 1:963764‑M2/70‑42 (MQ=255) ccacATCAACCAGGCAACATGCCCGACTTgttgatgtggtgatatcaccgatttatccgtgtcttagagg < 1:1574051‑M2/70‑42 (MQ=255) ccacATCAACCAGGCAACATGCCCGACTTgttgatgtggtgatatcaccgatttatcagtgtcttagagg < 1:3681289‑M2/70‑42 (MQ=255) ccacATCAACCAGGCAACATGCCCGACTTGTTGAATGCAATAAACAGAAGGAAAAAACAGGGAGGAGaa > 1:3190651/1‑69 (MQ=255) cacaTCAACCAGGCAACATGCCCGACTTGTTGAATGCAATAAACAGAAGGAAAAAACAGGGAGGAGaa > 1:1516322/1‑68 (MQ=255) acaTCAACCAGGCAACATGCCCGACTTgttgatgtggtgatatcaccgatttatccgtgtcttagaggga < 1:1481633‑M2/70‑44 (MQ=255) acaTCAACCAGGCAACATGCCCGACTTgttgatgtggtgatatcaccgatttatccgtgtcttagaggga < 1:3214995‑M2/70‑44 (MQ=255) caTCAACCAGGCAACATGCCCGACTTGTTGAATGCAATAAACAGAAGGAAAAAACa < 1:1213609/56‑1 (MQ=255) caTCAACCAGGCAACATGCCCGACTTGTTGAATGCAATAAACAGAAGGAAAAAACa < 1:389255/56‑1 (MQ=255) caTCAACCAGGCAACATGCCCGACTTGTTGAATGCAATAAACAGAAGGAAAAAACa < 1:1968206/56‑1 (MQ=255) aTCAACCAGGCAACATGCCCGACTTGTTGAATGCAATAAACAGAAGGAAAAAACAGGGAGGAGAAaagaag < 1:110459/71‑1 (MQ=255) tCAACCAGGCATCATGCCCGACTTGTTGAATGCAATAAACAGaa < 1:3078603/44‑1 (MQ=255) tCAACCAGGCAACATGCCCGACTTGTTGAATGCAATaaa < 1:1003611/39‑1 (MQ=255) tCAACCAGGCAACATGCCCGACTTGTTGAATGCAATaaa < 1:1761571/39‑1 (MQ=255) tCAACCAGGCAACATGCCCGACTTGTTGAATGCAATAAACAGaa < 1:785157/44‑1 (MQ=255) tCAACCAGGCAACATGCCCGACTTGTTGAATGCAATAAACAGaa < 1:1672724/44‑1 (MQ=255) tCAACCAGGCAACATGCCCGACTTGTTGAATGCAATAAACAGaa < 1:559918/44‑1 (MQ=255) tCAACCAGGCAACATGCCCGACTTGTTGAATGCAATAAACAGaa < 1:3010247/44‑1 (MQ=255) tCAACCAGGCAACATGCCCGACTTGTTGAATGCAATAAACAGaa < 1:1603657/44‑1 (MQ=255) cAACCAGGCAACATGCCCGACTTGTTGAATGCAATAAACAGaa < 1:980839/43‑1 (MQ=255) cAACCAGGCAACATGCCCGACTTGTTGAATGCAATAAACAGAAGGAAAAAACAGGGAGGAGaaaa > 1:2013153/1‑65 (MQ=255) cAACCAGGCAACATGCCCGACTTGTTGAATGCAATAAACAGAAGGAAAAAACAGGGAGGAGAAAAGAAgtg > 1:2024745/1‑71 (MQ=255) cAACCAGGCAACATGCCCGACTTGTTGAATGCAATAAACAGAAGGAAAAAACAGGGAGGAGAAAAGAAgtg > 1:1403774/1‑71 (MQ=255) aaCCAGGCAACATGCCCGACTTGTTGAATGCAATAAACAGaa > 1:3073641/1‑42 (MQ=255) aaCCAGGCAACATGCCCGACTTGTTGAATGCAATAAACAGAAGGAAAAAACAGGGAGGAGAAAAGAAgtgg > 1:654056/1‑71 (MQ=255) aaCCAGGCAACATGCCCGACTTGTTGAATGCAATAAACAGAAGGAAAAAACAGGGAGGAGAAAAGAAgtgg > 1:3293043/1‑71 (MQ=255) aaCCAGGCAACATGCCCGACTTGTTGAATGCAATAAACAGAAGGAAAAAACAGGGAGGAGAAAAGAAgtgg > 1:2114019/1‑71 (MQ=255) ccAGGCAACATGCCCGACTTgttgatgtggtgatatcaccgatttatccgtgtcttagagggacaatcgat > 1:1278878‑M2/1‑20 (MQ=255) ccAGGCAACATGCCCGACTTgttgatgtggtgatatcaccgatttatccgtgtcttagagggacaatcgat > 1:1565293‑M2/1‑20 (MQ=255) ccAGGCAACATGCCCGACTTgttgatgtggtgatatcaccgatttatccgtgtcttagagggacaatcgat > 1:1749899‑M2/1‑20 (MQ=255) ccAGGCAACATGCCCGACTTGTTGAATGCAATAAACAGAAGGAAAAAACAggg > 1:1213183/1‑53 (MQ=255) ccAGGCAACATGCCCGACTTGTTGAATGCAATAAACAGAAGGAAAAAACATGGAGGAGAAAAGAAgtggtg > 1:2850218/1‑71 (MQ=255) ccAGGCAACATGCCCGACTTGTTGAATGCAATAAACAGAAGGAAAAAACAGGGAGGAGAAAAGAAgtggt > 1:3128883/1‑70 (MQ=255) cAGGCAACATGCCCGACTTGTTGAATGCAATAAACAGAAGGAAAAAACAggg < 1:3348964/52‑1 (MQ=255) aGGCAACATGCCCGACTTGTTGAATGCAATAAACAGAAGGAAAAAACAGGGAGGAGAAAAGAAGTGGTGc > 1:359925/1‑70 (MQ=255) aGGCAACATGCCCGACTTGTTGAATGCAATAAACAGAAGGAAAAAACAGGGAGGAGAAAAGAAGTGGTGCt > 1:1474863/1‑71 (MQ=255) gCAACATGCCCGACTTGTTGAATGCAATAAACAGAAGGAAAAAACAGGGAGGAGAAAAGAAGTGGTGCTGa > 1:2390521/1‑71 (MQ=255) cAACATGCCCGACTTGTTGAATGCAATAAACAGAAGGAAAAAACAGGGAGGAGAAAAGAAGTGGTGCTGa > 1:3452924/1‑70 (MQ=255) cAACATGCCCGACTTGTTGAATGCAATAAACAGAAGGAAAAAACAGGGAGGAGAAAAGAAGTGGTGCTGAt < 1:3350376/71‑1 (MQ=255) aaCATGCCCGACTTGTTGAATGCAATAAACAGAAGGAAAAAACAGGGAGGAGAAAAGAAgtg > 1:3460427/1‑62 (MQ=255) aTGCCCGACTTGTTGAATGCAATAAACAGAAGGAAAAAACAGGGAGGAGAAAAGAAGTGGTGCTGATAgg > 1:1819736/1‑70 (MQ=255) aTGCCCGACTTGTTGAATGCAATAAACAGAAGGAAAAAACAGGGAGGAGAAAAGAAGTGGTGCTGATAGGc < 1:2504559/71‑1 (MQ=255) cccGACTTGTTGAATGCAATAAACAGAAGGAAAAAACAGGGAGGAGAAAAGAAGTGGTGCTGATAGGCAGa < 1:2087662/71‑1 (MQ=255) ccGACTTGTTGAATGCAATAAACAGAAGGAAAAAACAGGGAGGAGAAAAGAAGTGGTGCTGATa > 1:956898/1‑64 (MQ=255) ccGACTTGTTGAATGCAATAAACAGAAGGAAAAAACAGGGAGGAGAAAAGAAGTGGTGCTGATAGGCAGAt < 1:2747762/71‑1 (MQ=255) cGACTTGTTGAATGCAATAAACAGAAGGAAAAAACAGGGAGGAGAAAAGAAGTGGTGCTGATAGGCa > 1:915527/1‑67 (MQ=255) gACTTGTTGAATGCAATAAACAGAAGGAAAAAACAGGGAGGAGaaa < 1:1711226/46‑1 (MQ=255) gACTTGTTGAATGCAATAAACAGAAGGAAAAAACAGGGAGGAGaaa < 1:3327374/46‑1 (MQ=255) aCTTGTTGAATGCAATAAACAGAAGGAAAAAACAGGGAGGAGAAaag < 1:2999186/47‑1 (MQ=255) aCTTGTTGAATGCAATAAACAGAAGGAAAAAACAGGGAGGAGAAaag < 1:528978/47‑1 (MQ=255) aCTTGTTGAATGCAATAAACAGAAGGAAAAAACAGGGAGGAGAAAAGAAGTGGTGCTGATAGGc > 1:1292198/1‑64 (MQ=255) aCTTGTTGAATGCAATAAACAGAAGGAAAAAACAGGGAGGAGAAAAGAAGTGGTGCTGATAGGCAGATTCg < 1:1464522/71‑1 (MQ=255) aCTTGTCGAATGCAATAAACAGAAGGAAAAAACAGGGAGGAGAAAAGAAGTGGTGCTGATAGGCAGATTCg < 1:1627202/71‑1 (MQ=255) cTTGTTGAATGCAGTAAACAGAAGGAAAAAACAGGGAGGAGAAAAGAAGTGGTGCTGATAGGCAGATTCg > 1:1446470/1‑70 (MQ=255) cTTGTTGAATGCAATAAACAGAAGGAAAAAACAGGGAGGAGAAAAGAAGTGGTGCTGATAGGCAGATTCg > 1:1516657/1‑70 (MQ=255) ttgttgAATGCAATAAACAGAAGGAAAAAACAGGGAGGAGAAAAGAAGTGGTGCTGAt < 1:63197/58‑1 (MQ=255) ttgttgAATGCAATAAACAGAAGGAAAAAACAGGGAGGAGAAAAGAAGTGGTGCTGAt < 1:3178281/58‑1 (MQ=255) ttgttgAATGCAATAAACAGAAGGAAAAAACAGGGAGGAGAAAAGAAGTGGTGCTGAt < 1:787162/58‑1 (MQ=255) tgttgAATGCAATAAACAGAAGGAAAAAACAGgga > 1:3594367/1‑35 (MQ=255) | CATCGATTGTCCCTCTAAGACACGGATAAATCGGTGATATCACCACATCAACCAGGCAACATGCCCGACTTGTTGAATGCAATAAACAGAAGGAAAAAACAGGGAGGAGAAAAGAAGTGGTGCTGATAGGCAGATTCG > minE/2266441‑2266578 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |