| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | = 2309686 | 59 (1.000) | 4 (0.080) | 3/88 | NT | 7.9% | coding (69/531 nt) | hslV | peptidase component of the HslUV protease |
| ? | minE | = 2309706 | 43 (0.840) | coding (89/531 nt) | hslV | peptidase component of the HslUV protease | |||||
GCCGTAACGGCCATGTGGTCATCGCTGGTGATGGTCAGGCCACGTTGGGCAATACCGTAATGAAAGGCAACGTGAAAAAGGTCCGCCGTCTGTACAACGACAAAGTCATCGCGGGCTTTGCGGGCGGTACTGCGG > minE/2309640‑2309774 | gCCGTAACGGCCATGTGGTCATCGCTGGTGATGGTCAGGCCACGTTGGGCAATACCGTAATGAAAGGcaac > 1:1013507‑M2/1‑67 (MQ=255)gCCGTAACGGCCATGTGGTCATCGCTGGTGATGGTCAGGCCACGTTGGGCAATACCGTAATGAAAGGcaac > 1:1783543‑M2/1‑67 (MQ=255) ccGTAACGGCCATGTGGTCATCGCTGGTGATGGTCAGGCCACGTTGGGCAATACCGTAATGAAAGGcaacg > 1:3075158‑M2/1‑66 (MQ=255) ccGTAACGGCCATGTGGTCATCGCTGGTGATGGTCAGGCCACGTTGGGCAATACCGTAATGAAAGGcaacg > 1:2438051‑M2/1‑66 (MQ=255) tAACGGCCATGTGGTTATCGCTGGTGATGGTCAGGCCACGTTGGGCAATACCGTAATGAAAGGCAACGTGa < 1:1342494/71‑1 (MQ=255) tAACGGCCATGTGGTCATCGCTGGTGATGGTCAGGCCACGTTGGGCAATACCGTAATGAAAgg > 1:2367285/1‑63 (MQ=255) tAACGGCCATGTGGTCATCGCTGGTGATGGTCAGGCCACGTTGGGCAATACCGTAATGAAAgg > 1:1421227/1‑63 (MQ=255) tAACGGCCATGTGGTCATCGCTGGTGATGGTCAGGCCACGTTGGGCAATACCGTAATGAAAGGCAACGTGa < 1:3113774/71‑1 (MQ=255) tAACGGCCATGTGGTCATCGCTGGTGATGGTCAGGCCACGTTGGGCAATACCGTAATGAAAGGCAACGTGa < 1:3195700/71‑1 (MQ=255) tAACGGCCATGTGGTCATCGCTGGTGATGGTCAGGCCACGTTGGGCAATACCGTAATGAAAGGCAACGTGa < 1:2780239/71‑1 (MQ=255) tAACGGCCATGTGGTCATCGCTGGTGATGGTCAGGCCACGTTGGGCAATACCGTAATGAAAGGCAACGTGa < 1:1843917/71‑1 (MQ=255) tAACGGCCATGTGGTCATCGCTGGTGATGGTCAGGCCACGTTGGGCAATACCGTAATGAAAGGCAACGTGa < 1:1590718/71‑1 (MQ=255) cGGCCATGTGGTCATCGCTGGTGATGGTCAGGCCACGTTGGGCAATACCGTAATGAAAGGCAACGTGaaaa < 1:1871211/71‑1 (MQ=255) cGGCCATGTGGTCATCGCTGGTGATGGTCAGGCCACGTTGGGCAATACCGTAATGAAAGGCAACGTGaaaa < 1:133749/71‑1 (MQ=255) ggCCATGTGGTCATCGCTGGTGATGGTCAGGCCACGTTGGGCAATACCGTAATGAAAGGCAACGTGaaaa < 1:3433844/70‑1 (MQ=255) ggCCATGTGGTCATCGCTGGTGATGGTCAGGCCACGTTGGGCAATACCGTAATGAAAGGCAACGTGaaa > 1:177324/1‑69 (MQ=255) ccATGTGGTCATCGCTGGTGATGGTCAGGCCACGTTGGGCAATACCGTAATGAAAGGCAACGTGAAAAAgg < 1:1123463/71‑1 (MQ=255) aTGTGGTCATCGCTGGTGATGGTCAGGCCACGTTGGGCAATACCGTAATGAAAGGCAACGTGAAAAAGGTc > 1:2581017/1‑71 (MQ=255) aTGTGGTCATCGCTGGTGATGGTCAGGCCACGTTGGGCAATACCGTAATGAAAGGCAACGTGAAAAAGGTc < 1:1922494/71‑1 (MQ=255) gtgGTCATCGCTGGTGATGGTCAGGCCACGTTGGGCAATACCGTAATGAAAGGCAACGTGAAAAAGGTccg > 1:664832/1‑71 (MQ=255) tgGTCATCGCTGGTGATGGTCAGGCCACGTTGGGCAATACCGTAATGAAAGGCAACGTGaa < 1:410778/61‑1 (MQ=255) tgGTCATCGCTGGTGATGGTCAGGCCACGTTGGGCAATACCGTAATGAAAGGCAACGTGaa < 1:1996780/61‑1 (MQ=255) gTCATCGCTGGTGATGGTCAGGCCACGTTGGGCAATACCGTAATGAAAGGCAACGTGAAAAAGGTccgccg > 1:390895/1‑71 (MQ=255) tCATCGCTGGTGATGGTCAGGCCACGTTGGGCAATACCGTAATGAAAGGCAACGTGaaaa < 1:316528/60‑1 (MQ=255) tCATCGCTGGTGATGGTCAGGCCACGTTGGGCAATACCGTAATGAAAGGCAACGTGaaaa < 1:3657848/60‑1 (MQ=255) tCATCGCTGGTGATGGTCAGGCCACGTTGGGCAATACCGTAATGAAAGGCAACGTGaaaa < 1:727041/60‑1 (MQ=255) tCATCGCTGGTGATGGTCAGGCCACGTTGGGCAATACCGTAATGAAAGGCAACGTGaaaa < 1:1295500/60‑1 (MQ=255) tCATCGCTGGTGATGGTCAGGCCACGTTGGGCAATACCGTAATGAAAGGCAACGTGAAAAAGGTCCGCCGt > 1:51649/1‑71 (MQ=255) aTCGCTGGTGATGGTCAGGCCACGTTGGGCAATACCGTAATGAAAGGCAACGTGAAAAAGGTccg > 1:1397357/1‑65 (MQ=255) aTCGCTGGTGATGGTCAGGCCACGTTGGGCAATACCGTAATGAAAGGCAACGTGAAAAAGGTCCGCCGTCt < 1:1291511/71‑1 (MQ=255) tCGCTGGTGATGGTCAGGCCACGTTGGGCAATACCGTAATGAAAGG‑AACGTGAAAAAGGTCCGCCGTCTg > 1:1034537/1‑70 (MQ=255) gCTGGTGATGGTCAGGCCACGTTGGGCAATACCGTAATGAAAGGCAACGTGAAAAAGGTCCGCCGTCTGt < 1:2134884/70‑1 (MQ=255) gCTGGTGATGGTCAGGCCACGTTGGGCAATACCGTAATGAAAGGCAACGTGAAAAAGGTCCGCCGTCTGTa > 1:284625/1‑71 (MQ=255) gTGATGGTCAGGCCACGTTGGGCAATACCGTAATGAAAGGCAACGTGAAAAAGGTCCGCCGTCTGTACaa < 1:2917832/70‑1 (MQ=255) tGATGGTCAGGCCACGTTGGGCAATACCGTAATGAAAGGCAACGGGAAAAAGGTCCGCCGTCTGTACAACg < 1:513557/71‑1 (MQ=255) aTGGTCAGGCCACGTTGGGCAATACCGTAATGAAAGGCAACGTGAAAAAGGTCCGCCGTCTGTACAACGAc < 1:1671360/71‑1 (MQ=255) tGGTCAGGCCACGTTGGGCAATACCGTAATGAAAGGcaa < 1:1084253‑M2/39‑4 (MQ=255) tGGTCAGGCCACGTTGGGCAATACCGTAATGAAAGGCAACGTGaaa > 1:2005431/1‑46 (MQ=255) tCAGGCCACGTTGGGCAATACCGTAATGAAAGGcaacgt < 1:2167281‑M2/39‑7 (MQ=255) tCAGGCCACGTTGGGCAATACCGTAATGAAAGGCAACGTGTAAAAGGTCCGCCGt < 1:1585053/55‑1 (MQ=255) ggCCACGTTGGGCAATACCGTAATGAAAGGcaacgtggcctgaccatcaccagcgatgaccacatggccgt < 1:3473377‑M2/71‑42 (MQ=255) ggCCACGTTGGGCAATACCGTAATGAAAGGCAACGTGAAAAAGGTCCGCCGTCTGTACAACGACAAAGTCa < 1:2060721/71‑1 (MQ=255) ggCCACGTTGGGCAATACCGTAATGAAAGGCAACGTGAAAAAGGTCCGCCGTCTGTACAACGACAAAGTCa < 1:1558578/71‑1 (MQ=255) gCCACGTTGGGCAATACCGTAATGAAAGGcaacgtggcctgaccatcaccagcgatgaccacatggccgt < 1:1148076‑M2/70‑42 (MQ=255) ccACGTTGGGCAATACCGTAATGAAAGGCAACGTGAAAAAGGTCCGCCGTCTGTACAACGACAAAGTCATc > 1:1807138/1‑71 (MQ=255) cACGTTGGGCAATACCGTAATGAAAGGCAACGTGaaaaa > 1:2436454/1‑39 (MQ=255) cACGTTGGGCAATACCGTAATGAAAGGCAACGTGAAAAAGGTCCGCCGTCTGTACAACGACAAAGTCATcg > 1:3566965/1‑71 (MQ=255) cGTTGTGCAATACCGTAATGAAAGGCAACGTGAAAAAGGTCCGCCGTCTGTACAACGACAAAGTCATcgcg < 1:1104124/71‑1 (MQ=255) ggCAATACCGTAATGAAAGGCAACGTGAAAAAGGTCCGCCGTCTGTACAACGACAAAGTCATCGCGGGCtt < 1:472294/71‑1 (MQ=255) ggCAATACCGTAATGAAAGGCAACGTGAAAAAGGTCCGCCGTCTGTACAACGACAAAGTCATCGCGGGCtt < 1:658622/71‑1 (MQ=255) cAATACCGTAATGAAAGGCAACGTGAAAAAGGTCCGCCGTCTGTACAACGACAAAGTCATCGCGGGCttt > 1:186384/1‑70 (MQ=255) aaTACCGTAATGAAAGTCAACGTGAAAAAGGTCCGCCGTCTGTACAACGACAAAGTCATCGCGGGCttt < 1:3341661/69‑1 (MQ=255) aaTACCGTAATGAAAGGcaacgtggcctgaccatc < 1:2073212‑M2/35‑19 (MQ=255) aaTACCGTAATGAAAGGcaacgtggcctgaccatc < 1:3113443‑M2/35‑19 (MQ=255) aTACCGTAATGAAAGGCAACGTGAAAAAGGTCCGCCGTCTGTACAACgtg < 1:87854/50‑3 (MQ=255) aTACCGTAATGAAAGGCAACGTGAAAAAGGTCCGCCGTCTGTACAACgtg < 1:1768758/50‑3 (MQ=255) aTACCGTAATGAAAGGCAACGTGAAAAAGGTCCGCCGTCTGTACAACgtg < 1:2477911/50‑3 (MQ=255) tACCGTAATGAAAGGCAACGTGAAAAAGGTCCGCCGTCTGTACAACGACAAAGTCATCGCGGGCTTTgcgg < 1:2772530/71‑1 (MQ=255) aCCGTAATGAAAGGCAACGTGAAAAAGGTCCGCCGTCTGTACAACGACAAAGTCATCGCGGGCTTTgcg > 1:431357/1‑69 (MQ=255) ccGTAATGAAAGGCAACGTGAAAAAGGTCCGCCGTCTGTACAACGACAAAGTCATCGCGGGCTTTgcgggc > 1:2375665/1‑71 (MQ=255) cGTAATGAAAGGCAACGTGAAAAAGTTCCGCCGTCTGTACAACGACAAAGTCATCGCGGGCTTTgcgggcg > 1:2905818/1‑71 (MQ=255) cGTAATGAAAGGCAACGTGAAAAAGTTCCGCCGTCTGTACAACGACAAAGTCATCGCGGGCTTTgcgggcg > 1:2901512/1‑71 (MQ=255) cGTAATGAAAGGCAACGTGAAAAAGGTCCGCCGTCTGTACAACGACAAAGTCATCGCGGGCTTTgcgggcg > 1:1394617/1‑71 (MQ=255) cGTAATGAAAGGCAACGTGAAAAAGGTCCGCCGTCTGTACAACGACAAAGTCATCGCGGGCTTTgcgggcg > 1:2762388/1‑71 (MQ=255) cGTAATGAAAGGCAACGTGAAAAAGGTCCGCCGTCTGTACAACGACAAAGTCATCGCGGGCTTTgcgggcg > 1:273968/1‑71 (MQ=255) gTAATGAAAGGCAACGTGAAAAAGGTCCGCCGTCTGTACAACGACAAAGGCATCGCGGGCTTTgcgggcgg < 1:3136089/71‑1 (MQ=255) tAATGAAAGGCAACGTGAAAAAGGTCCGCCGTCTGTACAACGACAAAGTCATcgc < 1:3009060/55‑1 (MQ=255) tAATGAAAGGCAACGTGAAAAAGGTCCGCCGTCTGTACAACGACAAAGTCATCGCGGGCTTTgcgggcgg > 1:2886516/1‑70 (MQ=255) tAATGAAAGGCAACGTGAAAAAGGTCCGCCGTCTGTACAACGACAAAGTCATCGCGGGCTTTgcgggc < 1:1443302/68‑1 (MQ=255) aaTGAAAGGCAACGTGAAAAAGGTCCGCCGTCTGTACAACGACAAAGTCATCGCGGGCTTTGCGGGCGGt < 1:3721324/70‑1 (MQ=255) aTGAAAGGCAACGTGAAAAAGGTCCGCCGTCTGTACAACGACAAAGTCATCGCGGGCtt > 1:2389951/1‑59 (MQ=255) aTGAAAGGCAACGTGAAAAAGGTCCGCCGTCTGTACAACGACAAAGTCATCGCGGGCtt > 1:1421701/1‑59 (MQ=255) aTGAAAGGCAACGTGAAAAAGGTCCGCCGTCTGTACAACGACAAAGTCATCGCGGGCtt > 1:1033699/1‑59 (MQ=255) aaaGGCAACGTGAAAAAGGTCCGCCGTCTGTACAACGACAAAGTCATCGCggg > 1:2808210/1‑53 (MQ=255) aGGCAACGTGAAAAAGGTCCGCCGTCTGTACAACGACAAAGTCATCGCGGGCTTTGCGGGCGGTACTGCgg < 1:750284/71‑1 (MQ=255) | GCCGTAACGGCCATGTGGTCATCGCTGGTGATGGTCAGGCCACGTTGGGCAATACCGTAATGAAAGGCAACGTGAAAAAGGTCCGCCGTCTGTACAACGACAAAGTCATCGCGGGCTTTGCGGGCGGTACTGCGG > minE/2309640‑2309774 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |