| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | = 2593308 | 53 (0.900) | 6 (0.120) | 3/90 | NT | 11.6% | coding (422/567 nt) | slp | outer membrane lipoprotein |
| ? | minE | = 2593325 | 45 (0.860) | coding (405/567 nt) | slp | outer membrane lipoprotein | |||||
ATCCCACAGGTTATAGGTGGTATTAACCACTTCTCTCAAATGCCACACCTGGATGCCCTGCATATTCACTTCCAGGAAGTTATACGGGACTTTATTGATAAAGCCAGGTTGTTCACCCTGAATGGTGCCGAGGATGGTAA > minE/2593256‑2593395 | aTCCCACAGGTTATAGGTGGTATTAACCACTTCTCTCAAATGCCACACCTGGATGCCCTGCATTTTCACTt < 1:382028‑M2/71‑2 (MQ=255)aTCCCACAGGTTATAGGTGGTATTAACCACTTCTCTCAAATGCCACACCTGGATGCCCTGCATATTCACt < 1:3644529/70‑1 (MQ=255) tCCCACAGGTTATAGGTGGTATTAACCACTTCTCTCAAATGCCACACCTGGATGCCCTGCATATTCACTtc > 1:430198‑M2/1‑69 (MQ=255) ccACAGGTTATAGGTGGTATTAACCACTTCTCTCAAATGCCACACCTGGATGCCCTGCATATTCACTtcc > 1:2139478‑M2/1‑67 (MQ=255) acaGGTTATAGGTGGTATTAACCACTTCTCTCAAATGCCACACCTGGATGCCCTGCATATTCACTtccag < 1:2334575‑M2/70‑6 (MQ=255) acaGGTTATAGGTGGTATTAACCACTTCTCTCAAATGCAACACCTGGATGCCCTGCATATTCACTtccag < 1:22293‑M2/70‑6 (MQ=255) aGGTTATAGGTGGTATTAACCACTTCTCTCAAATGCCACACCTGGATGCCCTGCATATTCACTtccagg < 1:281627‑M2/69‑7 (MQ=255) ttATAGGTGGTATTAACCACTTCTCTCAAATGCCACACCTGGATGCCCTGCATATTCACTTCCAGGAAGt < 1:571736/70‑1 (MQ=255) taGGTGGTATTAACCACTTCTCTCAAATGCCACACCTGGATGCCCTGCATATTCACTTCCAGGAAGTtat < 1:97989/70‑1 (MQ=255) taGGTGGTATTAACCACTTCTCTCAAATGCCACACCTGGATGCCCTGCATATTCACTTCCAGGAAGTtat < 1:1530830/70‑1 (MQ=255) tATTAACCACTTCTCTCAAATGCCACACCTGGATGCCCTGCATATTCACTtc > 1:413297‑M2/1‑50 (MQ=255) ttAACCACTTCTCTCAAATGCCACACCTGGATGCCCTGCATATTCACTTCCAGGAAGTTATACGGGACttt < 1:1883219/71‑1 (MQ=255) ttAACCACTTCTCTCAAATGCCACACCTGGATGCCCTGCATATTCACTTCCAGGAAGTTATACGGGACtt > 1:1455029/1‑70 (MQ=255) ttAACCACTTCTCTCAAATGCCACACCTGGATGCCCTGCATATTCACTTCCAGGAAGTTATACGGGACtt > 1:2052201/1‑70 (MQ=255) aaCCACTTCTCTCAAATGCCACACCTGGATGCCCTGCATATTCACTTCCAGGAAGTtata > 1:3375705/1‑60 (MQ=255) aaCCACTTCTCTCAAATGCCACACCTGGATGCCCTGCATATTCACTTCCAGGAAGTtata > 1:2168624/1‑60 (MQ=255) aaCCACTTCTCTCAAATGCCACACCTGGATGCCCTGCATATTCACTTCCAGGAAGTtata > 1:3598320/1‑60 (MQ=255) aaCCACTTCTCTCAAATGCCACACCTGGATGCCCTGCATATTCACTTCCAGGAAGTTATACGGGACTTTa < 1:565406/70‑1 (MQ=255) aaCCACTTCTCTCAAATGCCACACCTGGATGCCCTGCATATTCACTTCCAGGAAGTTATACGGGACTTTAt > 1:3474498/1‑71 (MQ=255) aCCACTTCTCTCAAATGCCACACCTGGATGCCCTGCATATTCACTTCCAGGAAGTTATACGGGACTTTAt < 1:3576832/70‑1 (MQ=255) aCCACTTCTCTCAAATGCCACACCTGGATGCCCTGCATATTCACTTCCAGGAAGTTATACGGGACTTTAt < 1:3580975/70‑1 (MQ=255) ccACTTCTCTCAAATGCCACACCTGGATGCCCTGCATATTCACTTCCAGGAAGTTATACGGGACTTTAtt > 1:2676083/1‑70 (MQ=255) cACTTCTCTCAAATGCCACACCTGGATGCCCTGCATATTCACTTCCAGGAAGTTATACg > 1:768068/1‑59 (MQ=255) tctctcAAATGCCACACCTGGATGCCCTGCATATTCACTTCCAGGAAGTTATACGGGACTTTATTGATa < 1:2934288/69‑1 (MQ=255) ctctcAAATGCCACACCTGGATGCCCTGCATATTCACTTCCAGGAAGTTATACGGGACTTTATTGATAAAg > 1:738549/1‑71 (MQ=255) ctctcAAATGCCACACCTGGATGCCCTGCATATTCACTTCCAGGAAGTTATACGGGACTTTATTGATAAAg > 1:2626557/1‑71 (MQ=255) ctcAAATGCCACACCTGGATGCCCTGCATATTCACTtcca < 1:3453725‑M2/40‑5 (MQ=255) ctcAAATGCCACACCTGGATGCCCTGCATATTCACTtcca < 1:495202‑M2/40‑5 (MQ=255) ctcAAATGCCACACCTGGATGCCCTGCATATTCACTtcca < 1:949674‑M2/40‑5 (MQ=255) aaaTGCCACACCTGGATGCCCTGCATATTCACTTCCAGGAAg > 1:2768898/1‑42 (MQ=255) aaaTGCCACACCTGGATGCCCTGCATATTCACTTCCAGGAAg > 1:2077274/1‑42 (MQ=255) aaaTGCCACACCTGGATGCCCTGCATATTCACTTCCAGGAAGTTATACGGGACTTTATTGATAAAGCCa < 1:2314568/69‑1 (MQ=255) aaaTGCCACACCTGGATGCCCTGCATATTCACTTCCAGGAAGTTATACGGGACTTTATTGATAAAGCCa < 1:2957306/69‑1 (MQ=255) aaTGCCACACCTGGATGCCCTGCATATTCACTTCCAGGAAGTTATACGGGACTTTATTGATAAAGCCAGgt < 1:594285/71‑1 (MQ=255) aTGCCACACCTGGATGCCCTGCATATTCACTTCCAGGAAGTTATACGGGACTTTATTGATAAAGCCAGgtt > 1:544414/1‑71 (MQ=255) ccACACCTGGATGCCCTGCATATTCACTTCCAGGAAGTTATACGGGACTTTATTGATAAAGCCAGgttgtt < 1:3623943/71‑1 (MQ=255) ccACACCTGGATGCCCTGCATATTCACTTCCAGGAAGTTATACGGGACTTTATTGATAAAGCCAGgttgtt < 1:2881725/71‑1 (MQ=255) ccACACCTGGATGCCCTGCATATTCACTTCCAGGAAGTTATACGGGACTTTATTGATAAAGCCAGgttgt < 1:307182/70‑1 (MQ=255) cacCTGGATGCCCTGCATATTCACTtccaggtgtggcatttgagagaagtggttaataccacctataacct < 1:1768231‑M2/71‑47 (MQ=255) cacCTGGATGCCCTGCATATTCACTTCCAGGAAGTTATACGGGACTTTATTGATAAAGCCAGGTTGTTCAc < 1:377834/71‑1 (MQ=255) cacCTGGATGCCCTGCATATTCACTCCCAGGAAGTTATACGGGACTTTATTGATAAAGCCAGGTTGTTCAc < 1:1066684/71‑1 (MQ=255) acCTGGATGCCCTGCATATTCACTtccaggtgtggcatttgagagaagtggttaataccacctataacctg > 1:3558576‑M2/1‑24 (MQ=255) acCTGGATGCCCTGCATATTCACTtccaggtgtggcatttgagagaagtggttaataccacctataacctg > 1:2067971‑M2/1‑24 (MQ=255) acCTGGATGCCCTGCATATTCACTTCCAGGAAGTTATACGGGACTTTATTGATAAAGCCAGGTTGTTCAcc > 1:2680077/1‑71 (MQ=255) cTGGATGCCCTGCATATTCACTTCCAGGAAGTTATACGGGACTTTATTGATAAAGCCAGGTTGTTCACCCt < 1:2631436/71‑1 (MQ=255) ggATGCCCTGCATATTCACTtccaggtgtggcatttgagagaagtggttaataccacctataacctgtgg < 1:65131‑M2/70‑51 (MQ=255) ggATGCCCTGCATATTCACTtccaggtgtggcatttgagagaagtggttaataccacctataacctgtgg < 1:3642406‑M2/70‑51 (MQ=255) ggATGCCCTGCATATTCACTTCCAGGAAGTTATACGGGACTTTAt > 1:2882192/1‑45 (MQ=255) ggATGCCCTGCATATTCACTTCCAGGAAGTTATACGGGACTTTATTGATAAAGCCAGGTTGTTCACCCTg > 1:2308610/1‑70 (MQ=255) ggATGCCATGCATATTCACTtccaggtgtggcatttgagagaagtggttaataccacctataacctgtgg < 1:2173425‑M2/70‑51 (MQ=255) gATGCCCTGCATATTCACTTCCAGGAAGTTATACGGGACTTTATTGATAAAGCCAGGTTGTTCACCCTGaa > 1:3606380/1‑71 (MQ=255) gATGCCCTGCATATTCACTTCCAGGAAGTTATACGGGACTTTATTGATAAAGCCAGGTTGTTCACCCTGaa < 1:154375/71‑1 (MQ=255) gATGCCCTGCATATTCACTTCCAGGAAGTTATACGGGACTTTATTGATAAAGCCAGGTTGTTCACCCTGa < 1:2344015/70‑1 (MQ=255) gATGCCCTGCATATTCACTTCCAGGAAGTTATACGGGACTTTATTGATAAAGCCAGGTTGTTCACCCTGa < 1:2428178/70‑1 (MQ=255) aTGCCCTGCATATTCACTTCCAGGAAGTTATACGGGACTTTATTGATAAAGCCAGGTTGTTCAc > 1:177670/1‑64 (MQ=255) tGCCATGCATATTCACTTCCAGGAAGTTATACGGGACTTTATTGATAAAGCCAGGTTGTTCACCCTGAATg < 1:1879567/71‑1 (MQ=255) tgaatatTCACTTCCAGGAAGTTATACGGGACTTTATTGATAAAGCCAGGTTGTTCACCCTGAATGGTGcc > 1:2471122/4‑71 (MQ=255) gCATATTCACTTCCAGGAAGTTATACGGGACTTTATTGATAAAGCCAGGTTGTTCACCCTGAATGGTGcc > 1:809762/1‑70 (MQ=255) cATATTCACTTCCAGGAAGTTATACGGGACTTTATTGATAAAGCCAGGTTGTTCACCCTGAATGGTGcc < 1:44116/69‑1 (MQ=255) cATATTCACTTCCAGGAAGTTATACGGGACTTTATTGATAAAGCCAGGTTGTTCACCCTGAATGGTGCCGa < 1:3266121/71‑1 (MQ=255) cATATTCACTTCCAGGAAGTTATACGGGACTTTATTGATAAAGCCAGGTTGTTCACCCTGAATGGTGCCGa < 1:337851/71‑1 (MQ=255) atatTCACTTCCAGGAAGTTATACGGGACTTTATTGATAAAGCCAGGTTGTTCACCCTGAATGGTGCCGAg < 1:463177/71‑1 (MQ=255) atatTCACTTCCAGGAAGTTATACGGGACTTTATTGATAAAGCCAGGTTGTTCACCCTGAATGGTGCCGAg > 1:2702322/1‑71 (MQ=255) atatTCACTTCCAGGAAGTTATACGGGACTTTATTGATAAAGCCAGGTTGTTCACCCTGAATGGTGCCGAg > 1:1894429/1‑71 (MQ=255) tatTCACTTCCAGGAAGTTATACGGGACTTTATTGATa < 1:3515298/38‑1 (MQ=255) tCACTTCCAGGAAGTTATACGGGACTTTATTGATAAAGCCAGGTTGTTCACCCTGAATGGTGCCGAGGATg > 1:3255188/1‑71 (MQ=255) cACTTCCAGGAAGTTATACGGGACTTTATTGATAAAGCCAGGTTGTTCACCCTGAATGGTGCCGAGGATgg > 1:2145171/1‑71 (MQ=255) cTTCCAGGAAGTTATACGGGACTTTATTGATAAAGCCAGGTTGTTCACCCTGAATGGTGCCGAGGATGGTa < 1:2268280/71‑1 (MQ=255) ttCCAGGAAGTTATACGGGACTTTATTGATAAAGCCAGGTTGTTCACCCTGAATGGTGCCGAGGa < 1:858528/65‑1 (MQ=255) ttCCAGGAAGTTATACGGGACTTTATTGATAAAGCCAGGTTGTTCACCCTGAATGGTGCCGAGGATGGTaa > 1:1823643/1‑71 (MQ=255) | ATCCCACAGGTTATAGGTGGTATTAACCACTTCTCTCAAATGCCACACCTGGATGCCCTGCATATTCACTTCCAGGAAGTTATACGGGACTTTATTGATAAAGCCAGGTTGTTCACCCTGAATGGTGCCGAGGATGGTAA > minE/2593256‑2593395 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |