| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | 2987034 = | 43 (0.730) | 5 (0.100) | 4/90 | NT | 11.5% | intergenic (+202/‑198) | yjjY/yjtD | hypothetical protein/predicted rRNA methyltransferase |
| ? | minE | 2987057 = | 39 (0.750) | intergenic (+225/‑175) | yjjY/yjtD | hypothetical protein/predicted rRNA methyltransferase | |||||
TAAACGTGGTGAATCCAATTGTCGAGATTTATTTTTTATAAAATTATCCTAAGTAAACAGAAGGATATGTAGCATTTTTTAACAACTCAACCGTTAGTACAGTCAGGAAATAGTTTAGCCTTTTTTAAGCTAAGTAAA > minE/2986990‑2987127 | taaACGTGGTGAATCCAATTGTCGAGATTTATTTTTTATAAAATTATCCTAAGTAAACAGAAGGATATGTa < 1:1594445/71‑1 (MQ=255) aaCGTGGTGAATCCAATTGTCGAGATTTATTTTTTATAAAATTATCCTAAGTAAACAGAAGGATATGTAg < 1:2833230/70‑1 (MQ=255) ctgactgtactaacggttgagttgttaaaaaatgctacaTATCCTAAGTAAACAGAAGGATATg > 1:95343‑M1/40‑64 (MQ=255) ctgactgtactaacggttgagttgttaaaaaatgctacaTATCCTAAGTAAACAGAAGGATATg > 1:2823654‑M1/40‑64 (MQ=255) tggtgAATCCAATTGTCGAGATTTATTTTTTATAAAATTATCCTAAGTAAACAGAAGGATATGTAGCAttt < 1:21777/71‑1 (MQ=255) ggtgAATCCAATTGTCGAGATTTATTTTTTATAAAATTATCCTAAGTAAACAGAAGGATATGTAGCAttt > 1:2011417/1‑70 (MQ=255) gactgtactaacggttgagttgttaaaaaatgctacaTATCCTAAGTAAACAGAAGGATATGTa < 1:2489869‑M1/27‑1 (MQ=255) gAATCCAATTGTCGAGATTTATTTTTTATAAAATTATCCTAAGTAAAGAGAAGGATATGTAGCAtttttt > 1:1309881/1‑70 (MQ=255) tCCAATTGTCGAGATTTATTTTTTATAAAATTATCCTAAGTAAACAGAAGGATATGTAGCATTTTTTaac > 1:274722/1‑70 (MQ=255) ccAATAGTCGAGATTTATTTTTTATAAAATTATCCTAAGTAAACAGAAGGATATGTAGCATTTTTTa > 1:3174053/1‑67 (MQ=255) cGAGATTTATTTTTTATAAAATTATCCTAAGTAAACAGAAGGATATGTAg > 1:86992/1‑50 (MQ=255) cGAGATTTATTTTTTATAAAATTATCCTAAGTAAACAGAAGGATATGTAGCATTTTTTAACAACTCAACCg > 1:2597015/1‑71 (MQ=255) cGAGATATATTTTTTATAAAATTATCCTAAGTAAACAGAAGGATATGTAg > 1:3917/1‑50 (MQ=255) gagaTTTATTTTTTATAAAATTATCCTAAGTAAACAGAAGGATATGTAGCAttttt > 1:1622998/1‑56 (MQ=255) gagaTTTATTTTTTATAAAATTATCCTAAGTAAACAGAAGGATATGTAGCATTTTTTAACAACTCAACCg < 1:1087375/70‑1 (MQ=255) gagaTTTATTTTTTATAAAATTATCCTAAGTAAACAGAAGGATATGTAGCATTTTTTAACAACTCAACCGt < 1:2917085/71‑1 (MQ=255) gagaTTTATTTTTTATAAAATTATCCTAAGTAAACAGAAGGATATGTAGCATTTTTTAACAACTCAACCGt < 1:503915/71‑1 (MQ=255) gagaTTTATTTTTTATAAAATTATCCTAAGTAAACAGAAGGATATGTAGCATTTTTTAACAACTCAACCGt > 1:3476428/1‑71 (MQ=255) gagaTTTATTTTTTATAAAATTAACCTAAGTAAACAGAAGGATATGTAGCATTTTTTAACAACTCAACCGt > 1:375132/1‑71 (MQ=255) atttatttTTTATAAAATTATCCTAAGTAAACAGAAGGATATGTAGCATTTTTTAACAACTCAACCGTTAg < 1:1257975/71‑1 (MQ=255) tttatttTTTATAAAATTATCCTAAGTAAACAGAAGGATATGTAGCATTTTTTAACAACTCa < 1:318445/62‑1 (MQ=255) tatttTTTATAAAATTATCCTAAGTAAACAGAAGGATATGTAGCATTTTTTAACAACTCAACCGTTAGt > 1:2604606/1‑69 (MQ=255) atttTTTATAAAATTATCCTAAGTAAACAGAAGGATATGTAGCATTTTTTAACAACTCAACCGTTAGTa > 1:332777/1‑69 (MQ=255) ttttttATAAAATTATCCTAAGTAAACAGAAGGATATGTAGCAtt < 1:1973490/45‑1 (MQ=255) ttttttATAAAATTATCCTAAGTAAACAGAAGGATATGTAGCATTTTTTAACAACTCAACCGTTAGTACa < 1:2123686/70‑1 (MQ=255) ttttATAAAATTATCCTAAGTAAACAGAAGGATATGTAGCAtttt > 1:2494808/1‑45 (MQ=255) tttATAAAATTATCCTAAGTAAACAGAAGGATATGTAGCATTTTTTAACAACTCAACCGTTAGTACAGTc < 1:2465655/70‑1 (MQ=255) ttATAAAATTATCCTAAGTAAACAGAAGGATATGTAGCATTTTTTAACAACTCa < 1:1039862/54‑1 (MQ=255) ttATAAAATTATCCTAAGTAAACAGAAGGATATGTAGCATTTTTTAACAACTCa < 1:1015352/54‑1 (MQ=255) tataAAATTATCCTAAGTAAACAGAAGGATATGTAGCATTTTTTAACAACTCAACCGTTAGTACAGTCa < 1:1485667/69‑1 (MQ=255) ataAAATTATACTAAGTAAACAGAAGGATATGTAGCATTTTTTAACAACTCAACCGTTAGTACAGTCAgg > 1:2013681/1‑70 (MQ=255) taAAATTATCCTAAGTAAACAGAAGGATATGTTGCATTTTTTAACAACTCAACCGTTAGTACAGTCAGGa < 1:1850487/70‑1 (MQ=255) aaaaTTATCCTAAGTAAACAGAAGGATATGTAGCATTTTTTaac < 1:2338747/44‑1 (MQ=255) tacatatccttctgtttacttaggataTGTAGCATTTTTTAACAACTCAACCGTTAGTACAGTc < 1:2489869‑M2/37‑1 (MQ=255) aaTTATCCTAAGTAAACAGAAGGATATGTAGCATTTTTTAACAACTCAACCGTTAGTACAGTCAGGaaa > 1:1564130/1‑69 (MQ=255) aaTTATCCTAAGTAAACAGAAGGATATGTAGCATTTTTTAACAACTCAACCGTTAGTACAGTCAGGaaa > 1:1357071/1‑69 (MQ=255) catatccttctgtttacttaggataTGTAGCATTTTTTAACAACTCAACCGTTAGTACAGTCAg > 1:95343‑M2/26‑64 (MQ=255) catatccttctgtttacttaggataTGTAGCATTTTTTAACAACTCAACCGTTAGTACAGTCAg > 1:2823654‑M2/26‑64 (MQ=255) TCCTAAGTAAACAGAAGGATATGTAGCATTTTTTAACAACTCAACCGTTAGTACAGTCAGGAAATAGTTTa > 1:1088941‑M1/1‑71 (MQ=255) TCCTAAGTAAACAGAAGGATATGTAGCATTTTTTAACAACTCAACCGTTAGTACAGTCAGGAAATAGTTTa > 1:1081741‑M1/1‑71 (MQ=255) ccttctgtttacttaggataTGTAGCATTTTTTAACAACTCAACCGTTAGTACAGTCAGGAAATAGTTTAg > 1:376261‑M2/21‑71 (MQ=255) CCTAAGTAAACAGAAGGATATGTAGCATTTTTTAACAACTCAACCGTTAGTACAGTCAGGAAATAGTTTa < 1:2550977‑M1/70‑1 (MQ=255) CTAAGTAAACAGAAGGATATGTAGCATTTTTTAACAACt > 1:2910558‑M1/1‑39 (MQ=255) CTAAGTAAACAGAAGGATATGTAGCATTTTTTAACAACt > 1:3596649‑M1/1‑39 (MQ=255) ttctgtttacttaggataTGTAGCATTTTTTAACAACt > 1:2837001‑M2/19‑38 (MQ=255) aaGTAAACAGAAGGATATGTAGCATTTTTTAACAACTCAACCGTTAGTACAGTCAGGAAATAGTTTAGCCt > 1:2380224/1‑71 (MQ=255) aGTAAACAGAAGGATATGTAGCATTTTTTAACAACTCAACCGTTAGTACAGTCAGGAAATAGTTTAGCCtt > 1:1489832/1‑71 (MQ=255) gTAATCAGAAGGATATGTAGCATTTTTTAACAACTCAACCGTTAGTACAGTCAGGAAATAGTTTAGCCttt > 1:1405044/1‑71 (MQ=255) gTAAACAGAAGGATATGTAGCATTTTTTAACAACTCAACCg < 1:292165/41‑1 (MQ=255) tAAACAGAAGGATATGTAGCATTTTTTAACAACTCAACCGTTAGTACAGTCAGGAAATAg < 1:2954775/60‑1 (MQ=255) tAAACAGAAGGATATGTAGCATTTTTTAACAACTCAACCGTTAGTACAGTCAGGAAATAg < 1:958510/60‑1 (MQ=255) aaaCAGAAGGATATGTAGCATTTTTTAACAACTCAACCGTTAGTACAGTCAGGAAATAGTTTAGCCttttt > 1:2383670/1‑71 (MQ=255) aaCAGAAGGATATGTAGCATTTTTTAACAACTCAACCGTTAGTAc > 1:1578411/1‑45 (MQ=255) aaCAGAAGGATATGTAGCATTTTTTAACAACTCAACCGTTAGTACAGTCAGGa < 1:1058097/53‑1 (MQ=255) aaCAGAAGGATATGTAGCATTTTTTAACAACTCAACCGTTAGTACAGTCAGGAAATAGTTTAGCCtttttt < 1:3212902/71‑1 (MQ=255) aaCAGAAGGATATGTAGCATTTTTTAACAACTCAACCGTTAGTACAGTCAGGAAATAGTTTAGCCtttttt < 1:226929/71‑1 (MQ=255) gAAGGATATGTAGCATTTTTTAACAACTCAACCGTTAGTACAGTCAGGAAATAGttt < 1:3544147/57‑1 (MQ=255) gAAGGATATGTAGCATTTTTTAACAACTCAACCGTTAGTACAGTCAGGAAATAGttt < 1:422644/57‑1 (MQ=255) aaGGATATGTAGCATTTTTTAACAACTCAACCGTTAGTACAGTCAGGAAATAGTTTAGCCtttttt < 1:3683333/66‑1 (MQ=255) taTGTAGCATTTTTTAACAACTCAACCGTTAGTACa < 1:3662039‑M2/34‑1 (MQ=255) taTGTAGCATTTTTTAACAACTCAACCGTTAGTACAGTCAGGAAATAGTTTAGCCtttt < 1:2618401‑M2/57‑1 (MQ=255) taTGTAGCATTTTTTAACAACTCAACCGTTAGTACAGTCAGGAAATAGTTTAGCCtttt < 1:989952‑M2/57‑1 (MQ=255) taTGTAGCATTTTTTAACAACTCAACCGTTAGTACAGTCAGGAAATAGTTTAGCCTTTTTTAAGCTAAGt > 1:445119‑M2/3‑70 (MQ=255) aTGTAGCATTTTTTAACAACTCAACCGTTAGTACAGTCa < 1:3496696‑M2/38‑1 (MQ=255) aTGTAGCATTTTTTAACAACTCAACCGTTAGTACAGTCa < 1:3294528‑M2/38‑1 (MQ=255) aTGTAGCATTTTTTAACAACTCAACCGTTAGTACAGTCa < 1:2190291‑M2/38‑1 (MQ=255) aTGTAGCATTTTTTAACAACTCAACCGTTAGTACAGTCa < 1:2596802‑M2/38‑1 (MQ=255) tGTAGCATTTTTTAACAACTCAACCGTTAGTACAGTCAGGAAATAGTTTAGCCTTTTTTAAGCTAAGTaaa < 1:2185819/71‑1 (MQ=255) | TAAACGTGGTGAATCCAATTGTCGAGATTTATTTTTTATAAAATTATCCTAAGTAAACAGAAGGATATGTAGCATTTTTTAACAACTCAACCGTTAGTACAGTCAGGAAATAGTTTAGCCTTTTTTAAGCTAAGTAAA > minE/2986990‑2987127 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |