Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	1905877	1905905	29	58 [0]	[0] 22	ptr	protease III

TGGTTTCCTGAATCGGCTGCCATCCCGTTTCTGCCTGACTTAAGGGTGCCCAAAG  >  minE/1905822‑1905876                                                       | tGGTTTCCTGAATCGGCTTCCATCCCGTTTCTGCCTGACTTAAGGGTGCCCAAAg  <  1:1835786/55‑1 (MQ=255) tGGTTTCCTGAATCGGCTGCCATCCCGTTTCTGCCTGACTTAAGGGTGCCTAAAg  <  1:1463236/55‑1 (MQ=255) tGGTTTCCTGAATCGGCTGCCATCCCGTTTCTGCCTGACTTAAGGGTGCCCAAAg  <  1:3203653/55‑1 (MQ=255) tGGTTTCCTGAATCGGCTGCCATCCCGTTTCTGCCTGACTTAAGGGTGCCCAAAg  <  1:1017322/55‑1 (MQ=255) tGGTTTCCTGAATCGGCTGCCATCCCGTTTCTGCCTGACTTAAGGGTGCCCAAAg  <  1:2467384/55‑1 (MQ=255) tGGTTTCCTGAATCGGCTGCCATCCCGTTTCTGCCTGACTTAAGGGTGCCCAAAg  <  1:2515775/55‑1 (MQ=255) tGGTTTCCTGAATCGGCTGCCATCCCGTTTCTGCCTGACTTAAGGGTGCCCAAAg  <  1:2539974/55‑1 (MQ=255) tGGTTTCCTGAATCGGCTGCCATCCCGTTTCTGCCTGACTTAAGGGTGCCCAAAg  <  1:2640805/55‑1 (MQ=255) tGGTTTCCTGAATCGGCTGCCATCCCGTTTCTGCCTGACTTAAGGGTGCCCAAAg  <  1:267020/55‑1 (MQ=255) tGGTTTCCTGAATCGGCTGCCATCCCGTTTCTGCCTGACTTAAGGGTGCCCAAAg  <  1:2671596/55‑1 (MQ=255) tGGTTTCCTGAATCGGCTGCCATCCCGTTTCTGCCTGACTTAAGGGTGCCCAAAg  <  1:2761972/55‑1 (MQ=255) tGGTTTCCTGAATCGGCTGCCATCCCGTTTCTGCCTGACTTAAGGGTGCCCAAAg  <  1:2784141/55‑1 (MQ=255) tGGTTTCCTGAATCGGCTGCCATCCCGTTTCTGCCTGACTTAAGGGTGCCCAAAg  <  1:2790720/55‑1 (MQ=255) tGGTTTCCTGAATCGGCTGCCATCCCGTTTCTGCCTGACTTAAGGGTGCCCAAAg  <  1:3087579/55‑1 (MQ=255) tGGTTTCCTGAATCGGCTGCCATCCCGTTTCTGCCTGACTTAAGGGTGCCCAAAg  <  1:3116310/55‑1 (MQ=255) tGGTTTCCTGAATCGGCTGCCATCCCGTTTCTGCCTGACTTAAGGGTGCCCAAAg  <  1:2462490/55‑1 (MQ=255) tGGTTTCCTGAATCGGCTGCCATCCCGTTTCTGCCTGACTTAAGGGTGCCCAAAg  <  1:3401441/55‑1 (MQ=255) tGGTTTCCTGAATCGGCTGCCATCCCGTTTCTGCCTGACTTAAGGGTGCCCAAAg  <  1:3496075/55‑1 (MQ=255) tGGTTTCCTGAATCGGCTGCCATCCCGTTTCTGCCTGACTTAAGGGTGCCCAAAg  <  1:3500487/55‑1 (MQ=255) tGGTTTCCTGAATCGGCTGCCATCCCGTTTCTGCCTGACTTAAGGGTGCCCAAAg  <  1:3574081/55‑1 (MQ=255) tGGTTTCCTGAATCGGCTGCCATCCCGTTTCTGCCTGACTTAAGGGTGCCCAAAg  <  1:384166/55‑1 (MQ=255) tGGTTTCCTGAATCGGCTGCCATCCCGTTTCTGCCTGACTTAAGGGTGCCCAAAg  <  1:404088/55‑1 (MQ=255) tGGTTTCCTGAATCGGCTGCCATCCCGTTTCTGCCTGACTTAAGGGTGCCCAAAg  <  1:414932/55‑1 (MQ=255) tGGTTTCCTGAATCGGCTGCCATCCCGTTTCTGCCTGACTTAAGGGTGCCCAAAg  <  1:427524/55‑1 (MQ=255) tGGTTTCCTGAATCGGCTGCCATCCCGTTTCTGCCTGACTTAAGGGTGCCCAAAg  <  1:530/55‑1 (MQ=255) tGGTTTCCTGAATCGGCTGCCATCCCGTTTCTGCCTGACTTAAGGGTGCCCAAAg  <  1:822355/55‑1 (MQ=255) tGGTTTCCTGAATCGGCTGCCATCCCGTTTCTGCCTGACTTAAGGGTGCCCAAAg  <  1:824977/55‑1 (MQ=255) tGGTTTCCTGAATCGGCTGCCATCCCGTTTCTGCCTGACTTAAGGGTGCCCAAAg  <  1:831434/55‑1 (MQ=255) tGGTTTCCTGAATCGGCTGCCATCCCGTTTCTGCCTGACTTAAGGGTGCCCAAAg  <  1:1264137/55‑1 (MQ=255) tGGTTTCCTGAATCGGCTGCCATCCCGTTTCTGCCTGACTTAAGGGTGCCCAAAg  <  1:1338281/55‑1 (MQ=255) tGGTTTCCTGAATCGGCTGCCATCCCGTTTCTGCCTGACTTAAGGGTGCCCAAAg  <  1:1361664/55‑1 (MQ=255) tGGTTTCCTGAATCGGCTGCCATCCCGTTTCTGCCTGACTTAAGGGTGCCCAAAg  <  1:1332182/55‑1 (MQ=255) tGGTTTCCTGAATCGGCTGCCATCCCGTTTCTGCCTGACTTAAGGGTGCCCAAAg  <  1:1497264/55‑1 (MQ=255) tGGTTTCCTGAATCGGCTGCCATCCCGTTTCTGCCTGACTTAAGGGTGCCCAAAg  <  1:1625611/55‑1 (MQ=255) tGGTTTCCTGAATCGGCTGCCATCCCGTTTCTGCCTGACTTAAGGGTGCCCAAAg  <  1:167358/55‑1 (MQ=255) tGGTTTCCTGAATCGGCTGCCATCCCGTTTCTGCCTGACTTAAGGGTGCCCAAAg  <  1:1691343/55‑1 (MQ=255) tGGTTTCCTGAATCGGCTGCCATCCCGTTTCTGCCTGACTTAAGGGTGCCCAAAg  <  1:2429789/55‑1 (MQ=255) tGGTTTCCTGAATCGGCTGCCATCCCGTTTCTGCCTGACTTAAGGGTGCCCAAAg  <  1:1771327/55‑1 (MQ=255) tGGTTTCCTGAATCGGCTGCCATCCCGTTTCTGCCTGACTTAAGGGTGCCCAAAg  <  1:1853020/55‑1 (MQ=255) tGGTTTCCTGAATCGGCTGCCATCCCGTTTCTGCCTGACTTAAGGGTGCCCAAAg  <  1:1970413/55‑1 (MQ=255) tGGTTTCCTGAATCGGCTGCCATCCCGTTTCTGCCTGACTTAAGGGTGCCCAAAg  <  1:1255368/55‑1 (MQ=255) tGGTTTCCTGAATCGGCTGCCATCCCGTTTCTGCCTGACTTAAGGGTGCCCAAAg  <  1:1193813/55‑1 (MQ=255) tGGTTTCCTGAATCGGCTGCCATCCCGTTTCTGCCTGACTTAAGGGTGCCCAAAg  <  1:1117801/55‑1 (MQ=255) tGGTTTCCTGAATCGGCTGCCATCCCGTTTCTGCCTGACTTAAGGGTGCCCAAAg  <  1:2115673/55‑1 (MQ=255) tGGTTTCCTGAATCGGCTGCCATCCCGTTTCTGCCTGACTTAAGGGTGCCCAAAg  <  1:2122992/55‑1 (MQ=255) tGGTTTCCTGAATCGGCTGCCATCCCGTTTCTGCCTGACTTAAGGGTGCCCAAAg  <  1:2153956/55‑1 (MQ=255) tGGTTTCCTGAATCGGCTGCCATCCCGTTTCTGCCTGACTTAAGGGTGCCCAAAg  <  1:2224849/55‑1 (MQ=255) tGGTTTCCTGAATCGGCTGCCATCCCGTTTCTGCCTGACTTAAGGGTGCCCAAAg  <  1:1098559/55‑1 (MQ=255) tGGTTTCCTGAATCGGCTGCCATCCCGTTTCTGCCTGACTTAAGGGTGCCCAAAg  <  1:2253770/55‑1 (MQ=255) tGGTTTCCTGAATCGGCTGCCATCCCGTTTCTGCCTGACTTAAGGGTGCCCAAAg  <  1:1042850/55‑1 (MQ=255)  ggTTTCCTGAATCGGCTGCCATCCCGTTTCTGCCTGACTTAAGGGTGCCCAAAg  <  1:1765020/54‑1 (MQ=255)  ggTTTCCTGAATCGGCTGCCATCCCGTTTCTGCCTGACTTAAGGGTGCCCAAAg  <  1:3528591/54‑1 (MQ=255)  ggTTTCCTGAATCGGCTGCCATCCCGTTTCTGCCTGACTTAAGGGTGCCCAAAg  <  1:275725/54‑1 (MQ=255)   gTTTCCTGAATCGGCTGCCATCCCGTTTCTGCCTGACTTAAGGGTGCCCAAAg  <  1:2269696/53‑1 (MQ=255)      tCCTGAATCGGCTGCCATCCCGTTTCTGCCTGACTTAAGGGTGCCCAAAg  <  1:2079582/50‑1 (MQ=255)      tCCTGAATCGGCTGCCATCCCGTTTCTGCCTGACTTAAGGGTGCCCAAAg  <  1:2747421/50‑1 (MQ=255)         tGAATCGGCTGCCATCCCGTTTCTGCCTGACTTAAGGGTGCCCAAAg  <  1:2253349/47‑1 (MQ=255)          gAATCGGCTGCCATCCCGTTTCTGCCTGACTTAAGGGTGCCCAAAg  <  1:2743306/46‑1 (MQ=255)                                                       | TGGTTTCCTGAATCGGCTGCCATCCCGTTTCTGCCTGACTTAAGGGTGCCCAAAG  >  minE/1905822‑1905876

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑