Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	1980673	1980693	21	6 [0]	[0] 39	yqgF	predicted Holliday junction resolvase

CCGGACTGGAACATTATCGAGCGTTTACTGAAAGAGTGGCAGCCGGACGAAATCATCGTCGG  >  minE/1980611‑1980672                                                              | ccGGACTGGAACATTATCGAGCGTTTACTGAAAGAGTGGCAGCCGGACGAAATCATCGTCgg  >  1:1640947/1‑62 (MQ=255) ccGGACTGGAACATTATCGAGCGTTTACTGAAAGAGTGGCAGCCGGACGAAATCATCGTCgg  >  1:1883850/1‑62 (MQ=255) ccGGACTGGAACATTATCGAGCGTTTACTGAAAGAGTGGCAGCCGGACGAAATCATCGTCgg  >  1:2844551/1‑62 (MQ=255) ccGGACTGGAACATTATCGAGCGTTTACTGAAAGAGTGGCAGCCGGACGAAATCATCGTCgg  >  1:3439676/1‑62 (MQ=255) ccGGACTGGAACATTATCGAGCGTTTACTGAAAGAGTGGCAGCCGGACGAAATCATCGTCgg  >  1:906332/1‑62 (MQ=255) ccGGACTGGAACATTATCGAGCGTTTACTGAAAGAGTGGCAGCCGGACGAAATCATCGTCgg  >  1:923147/1‑62 (MQ=255)                                                              | CCGGACTGGAACATTATCGAGCGTTTACTGAAAGAGTGGCAGCCGGACGAAATCATCGTCGG  >  minE/1980611‑1980672

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑