Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	2239696	2239700	5	31 [0]	[0] 58	zraS	sensory histidine kinase in two‑component regulatory system with ZraR

TGCAGGCGCGCGCTCGGCAAAGTATTTCGCCAGTCCTTTAATCGAGGAAAGTGGGTTACGGA  >  minE/2239634‑2239695                                                              | tGCAGGCGCGCGCTCGTCAAAGTATTTCGCCAGTCCTTTAATCGAGGAAAGTGGGTTACTGa  <  1:512336/62‑1 (MQ=255) tGCAGGCGCGCGCTCGGCAAAGTATTTCGCCAGTCCTTTAATCGAGTAAAGTGGGTTACGGa  <  1:2368085/62‑1 (MQ=255) tGCAGGCGCGCGCTCGGCAAAGTATTTCGCCAGTCCTTTAATCGAGGAAAGTGGGTTACGGa  <  1:1380094/62‑1 (MQ=255) tGCAGGCGCGCGCTCGGCAAAGTATTTCGCCAGTCCTTTAATCGAGGAAAGTGGGTTACGGa  <  1:61370/62‑1 (MQ=255) tGCAGGCGCGCGCTCGGCAAAGTATTTCGCCAGTCCTTTAATCGAGGAAAGTGGGTTACGGa  <  1:46183/62‑1 (MQ=255) tGCAGGCGCGCGCTCGGCAAAGTATTTCGCCAGTCCTTTAATCGAGGAAAGTGGGTTACGGa  <  1:3600709/62‑1 (MQ=255) tGCAGGCGCGCGCTCGGCAAAGTATTTCGCCAGTCCTTTAATCGAGGAAAGTGGGTTACGGa  <  1:3287074/62‑1 (MQ=255) tGCAGGCGCGCGCTCGGCAAAGTATTTCGCCAGTCCTTTAATCGAGGAAAGTGGGTTACGGa  <  1:325748/62‑1 (MQ=255) tGCAGGCGCGCGCTCGGCAAAGTATTTCGCCAGTCCTTTAATCGAGGAAAGTGGGTTACGGa  <  1:3181328/62‑1 (MQ=255) tGCAGGCGCGCGCTCGGCAAAGTATTTCGCCAGTCCTTTAATCGAGGAAAGTGGGTTACGGa  <  1:315468/62‑1 (MQ=255) tGCAGGCGCGCGCTCGGCAAAGTATTTCGCCAGTCCTTTAATCGAGGAAAGTGGGTTACGGa  <  1:3096678/62‑1 (MQ=255) tGCAGGCGCGCGCTCGGCAAAGTATTTCGCCAGTCCTTTAATCGAGGAAAGTGGGTTACGGa  <  1:3040183/62‑1 (MQ=255) tGCAGGCGCGCGCTCGGCAAAGTATTTCGCCAGTCCTTTAATCGAGGAAAGTGGGTTACGGa  <  1:2914705/62‑1 (MQ=255) tGCAGGCGCGCGCTCGGCAAAGTATTTCGCCAGTCCTTTAATCGAGGAAAGTGGGTTACGGa  <  1:2912757/62‑1 (MQ=255) tGCAGGCGCGCGCTCGGCAAAGTATTTCGCCAGTCCTTTAATCGAGGAAAGTGGGTTACGGa  <  1:2761962/62‑1 (MQ=255) tGCAGGCGCGCGCTCGGCAAAGTATTTCGCCAGTCCTTTAATCGAGGAAAGTGGGTTACGGa  <  1:2751591/62‑1 (MQ=255) tGCAGGCGCGCGCTCGGCAAAGTATTTCGCCAGTCCTTTAATCGAGGAAAGTGGGTTACGGa  <  1:2663687/62‑1 (MQ=255) tGCAGGCGCGCGCTCGGCAAAGTATTTCGCCAGTCCTTTAATCGAGGAAAGTGGGTTACGGa  <  1:2574693/62‑1 (MQ=255) tGCAGGCGCGCGCTCGGCAAAGTATTTCGCCAGTCCTTTAATCGAGGAAAGTGGGTTACGGa  <  1:2227727/62‑1 (MQ=255) tGCAGGCGCGCGCTCGGCAAAGTATTTCGCCAGTCCTTTAATCGAGGAAAGTGGGTTACGGa  <  1:1822909/62‑1 (MQ=255) tGCAGGCGCGCGCTCGGCAAAGTATTTCGCCAGTCCTTTAATCGAGGAAAGTGGGTTACGGa  <  1:1802226/62‑1 (MQ=255) tGCAGGCGCGCGCTCGGCAAAGTATTTCGCCAGTCCTTTAATCGAGGAAAGTGGGTTACGGa  <  1:1741929/62‑1 (MQ=255) tGCAGGCGCGCGCTCGGCAAAGTATTTCGCCAGTCCTTTAATCGAGGAAAGTGGGTTACGGa  <  1:1624608/62‑1 (MQ=255) tGCAGGCGCGCGCTCGGCAAAGTATTTCGCCAGTCCTTTAATCGAGGAAAGTGGGTTACGGa  <  1:1531708/62‑1 (MQ=255) tGCAGGCGCGCGCTCGGCAAAGTATTTCGCCAGTCCTTTAATCGAGGAAAGTGGGTTACGGa  <  1:152966/62‑1 (MQ=255) tGCAGGCGCGCGCTCGGCAAAGTATTTCGCCAGTCCTTTAATCGAGGAAAGTGGGTTACGGa  <  1:1460352/62‑1 (MQ=255) tGCAGGCGCGCGCTCGGCAAAGTATTTCGCCAGTCCTTTAATCGAGGAAAGTGGGTTACGGa  <  1:1428724/62‑1 (MQ=255) tGCAGGCGCGCGCTCGGCAAAGTATTTCGCCAGTCCTTTAATCGAGGAAAGTGGGTTACGGa  <  1:140671/62‑1 (MQ=255) tGCAGGCGCGCGCTCGGCAAAGTATTTCGCCAGTCCTTTAATCGAGGAAAGTGGGTTACGGa  <  1:1183465/62‑1 (MQ=255) tGCAGGCGCGCGCTCGGCAAAGTATTTCGCCAGTCCTTTAATCGAGGAAAGGGGGTTACGGa  <  1:699691/62‑1 (MQ=255)                     aGTATTTCGCCAGTCCTTTAATCGAGGAAAGTGGGTTACGGa  <  1:1819648/42‑1 (MQ=255)                                                              | TGCAGGCGCGCGCTCGGCAAAGTATTTCGCCAGTCCTTTAATCGAGGAAAGTGGGTTACGGA  >  minE/2239634‑2239695

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑