Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	2261079	2261091	13	54 [0]	[0] 20	rpoB	RNA polymerase, beta subunit

ATCTTGCTCGATAAATTTCTGAAACGAGTCAAGCTGGATAGAAAGGAGATAAGGTACATCCA  >  minE/2261017‑2261078                                                              | aTCTTGCTCGATAAATTTCTGAAACGAGTCAAGCTGGATATAAAGGAGATAAGGTACATCCa  <  1:2672212/62‑1 (MQ=255) aTCTTGCTCGATAAATTTCTGAAACGAGTCAAGCTGGATAGAAAGGAGATAAGGTACATCCa  <  1:3561626/62‑1 (MQ=255) aTCTTGCTCGATAAATTTCTGAAACGAGTCAAGCTGGATAGAAAGGAGATAAGGTACATCCa  <  1:1035564/62‑1 (MQ=255) aTCTTGCTCGATAAATTTCTGAAACGAGTCAAGCTGGATAGAAAGGAGATAAGGTACATCCa  <  1:3007676/62‑1 (MQ=255) aTCTTGCTCGATAAATTTCTGAAACGAGTCAAGCTGGATAGAAAGGAGATAAGGTACATCCa  <  1:3052569/62‑1 (MQ=255) aTCTTGCTCGATAAATTTCTGAAACGAGTCAAGCTGGATAGAAAGGAGATAAGGTACATCCa  <  1:3202777/62‑1 (MQ=255) aTCTTGCTCGATAAATTTCTGAAACGAGTCAAGCTGGATAGAAAGGAGATAAGGTACATCCa  <  1:3205305/62‑1 (MQ=255) aTCTTGCTCGATAAATTTCTGAAACGAGTCAAGCTGGATAGAAAGGAGATAAGGTACATCCa  <  1:3272583/62‑1 (MQ=255) aTCTTGCTCGATAAATTTCTGAAACGAGTCAAGCTGGATAGAAAGGAGATAAGGTACATCCa  <  1:342712/62‑1 (MQ=255) aTCTTGCTCGATAAATTTCTGAAACGAGTCAAGCTGGATAGAAAGGAGATAAGGTACATCCa  <  1:350978/62‑1 (MQ=255) aTCTTGCTCGATAAATTTCTGAAACGAGTCAAGCTGGATAGAAAGGAGATAAGGTACATCCa  <  1:3543810/62‑1 (MQ=255) aTCTTGCTCGATAAATTTCTGAAACGAGTCAAGCTGGATAGAAAGGAGATAAGGTACATCCa  <  1:3548249/62‑1 (MQ=255) aTCTTGCTCGATAAATTTCTGAAACGAGTCAAGCTGGATAGAAAGGAGATAAGGTACATCCa  <  1:3557445/62‑1 (MQ=255) aTCTTGCTCGATAAATTTCTGAAACGAGTCAAGCTGGATAGAAAGGAGATAAGGTACATCCa  <  1:2963478/62‑1 (MQ=255) aTCTTGCTCGATAAATTTCTGAAACGAGTCAAGCTGGATAGAAAGGAGATAAGGTACATCCa  <  1:37298/62‑1 (MQ=255) aTCTTGCTCGATAAATTTCTGAAACGAGTCAAGCTGGATAGAAAGGAGATAAGGTACATCCa  <  1:451117/62‑1 (MQ=255) aTCTTGCTCGATAAATTTCTGAAACGAGTCAAGCTGGATAGAAAGGAGATAAGGTACATCCa  <  1:451986/62‑1 (MQ=255) aTCTTGCTCGATAAATTTCTGAAACGAGTCAAGCTGGATAGAAAGGAGATAAGGTACATCCa  <  1:491029/62‑1 (MQ=255) aTCTTGCTCGATAAATTTCTGAAACGAGTCAAGCTGGATAGAAAGGAGATAAGGTACATCCa  <  1:561257/62‑1 (MQ=255) aTCTTGCTCGATAAATTTCTGAAACGAGTCAAGCTGGATAGAAAGGAGATAAGGTACATCCa  <  1:599911/62‑1 (MQ=255) aTCTTGCTCGATAAATTTCTGAAACGAGTCAAGCTGGATAGAAAGGAGATAAGGTACATCCa  <  1:758505/62‑1 (MQ=255) aTCTTGCTCGATAAATTTCTGAAACGAGTCAAGCTGGATAGAAAGGAGATAAGGTACATCCa  <  1:809580/62‑1 (MQ=255) aTCTTGCTCGATAAATTTCTGAAACGAGTCAAGCTGGATAGAAAGGAGATAAGGTACATCCa  <  1:945212/62‑1 (MQ=255) aTCTTGCTCGATAAATTTCTGAAACGAGTCAAGCTGGATAGAAAGGAGATAAGGTACATCCa  <  1:956035/62‑1 (MQ=255) aTCTTGCTCGATAAATTTCTGAAACGAGTCAAGCTGGATAGAAAGGAGATAAGGTACATCCa  <  1:986242/62‑1 (MQ=255) aTCTTGCTCGATAAATTTCTGAAACGAGTCAAGCTGGATAGAAAGGAGATAAGGTACATCCa  <  1:989812/62‑1 (MQ=255) aTCTTGCTCGATAAATTTCTGAAACGAGTCAAGCTGGATAGAAAGGAGATAAGGTACATCCa  <  1:1925406/62‑1 (MQ=255) aTCTTGCTCGATAAATTTCTGAAACGAGTCAAGCTGGATAGAAAGGAGATAAGGTACATCCa  <  1:1078242/62‑1 (MQ=255) aTCTTGCTCGATAAATTTCTGAAACGAGTCAAGCTGGATAGAAAGGAGATAAGGTACATCCa  <  1:110801/62‑1 (MQ=255) aTCTTGCTCGATAAATTTCTGAAACGAGTCAAGCTGGATAGAAAGGAGATAAGGTACATCCa  <  1:1148532/62‑1 (MQ=255) aTCTTGCTCGATAAATTTCTGAAACGAGTCAAGCTGGATAGAAAGGAGATAAGGTACATCCa  <  1:1162208/62‑1 (MQ=255) aTCTTGCTCGATAAATTTCTGAAACGAGTCAAGCTGGATAGAAAGGAGATAAGGTACATCCa  <  1:1325219/62‑1 (MQ=255) aTCTTGCTCGATAAATTTCTGAAACGAGTCAAGCTGGATAGAAAGGAGATAAGGTACATCCa  <  1:1341042/62‑1 (MQ=255) aTCTTGCTCGATAAATTTCTGAAACGAGTCAAGCTGGATAGAAAGGAGATAAGGTACATCCa  <  1:1350008/62‑1 (MQ=255) aTCTTGCTCGATAAATTTCTGAAACGAGTCAAGCTGGATAGAAAGGAGATAAGGTACATCCa  <  1:1517279/62‑1 (MQ=255) aTCTTGCTCGATAAATTTCTGAAACGAGTCAAGCTGGATAGAAAGGAGATAAGGTACATCCa  <  1:1704723/62‑1 (MQ=255) aTCTTGCTCGATAAATTTCTGAAACGAGTCAAGCTGGATAGAAAGGAGATAAGGTACATCCa  <  1:1708611/62‑1 (MQ=255) aTCTTGCTCGATAAATTTCTGAAACGAGTCAAGCTGGATAGAAAGGAGATAAGGTACATCCa  <  1:1754886/62‑1 (MQ=255) aTCTTGCTCGATAAATTTCTGAAACGAGTCAAGCTGGATAGAAAGGAGATAAGGTACATCCa  <  1:2946350/62‑1 (MQ=255) aTCTTGCTCGATAAATTTCTGAAACGAGTCAAGCTGGATAGAAAGGAGATAAGGTACATCCa  <  1:196245/62‑1 (MQ=255) aTCTTGCTCGATAAATTTCTGAAACGAGTCAAGCTGGATAGAAAGGAGATAAGGTACATCCa  <  1:1967874/62‑1 (MQ=255) aTCTTGCTCGATAAATTTCTGAAACGAGTCAAGCTGGATAGAAAGGAGATAAGGTACATCCa  <  1:2168703/62‑1 (MQ=255) aTCTTGCTCGATAAATTTCTGAAACGAGTCAAGCTGGATAGAAAGGAGATAAGGTACATCCa  <  1:2336911/62‑1 (MQ=255) aTCTTGCTCGATAAATTTCTGAAACGAGTCAAGCTGGATAGAAAGGAGATAAGGTACATCCa  <  1:2387414/62‑1 (MQ=255) aTCTTGCTCGATAAATTTCTGAAACGAGTCAAGCTGGATAGAAAGGAGATAAGGTACATCCa  <  1:2397458/62‑1 (MQ=255) aTCTTGCTCGATAAATTTCTGAAACGAGTCAAGCTGGATAGAAAGGAGATAAGGTACATCCa  <  1:2593858/62‑1 (MQ=255) aTCTTGCTCGATAAATTTCTGAAACGAGTCAAGCTGGATAGAAAGGAGATAAGGTACATCCa  <  1:2597524/62‑1 (MQ=255) aTCTTGCTCGATAAATTTCTGAAACGAGTCAAGCTGGATAGAAAGGAGATAAGGTACATCCa  <  1:2812031/62‑1 (MQ=255) aTCTTGCTCGATAAATTTCTGAAACGAGTCAAGCTGGATAGAAAGGAGATAAGGTACATCCa  <  1:2889323/62‑1 (MQ=255)  tCTTGCTCGATAAATTTCTGAAACGAGTCAAGCTGGATAGAACGGAGATAAGGTACATCCa  <  1:3465246/61‑1 (MQ=255)  tCTTGCTCGATAAATTTCTGAAACGAGTCAAGCTGGATAGAAAGGAGATAAGGTACATCCa  <  1:2451919/61‑1 (MQ=255)  tCTTGCTCGATAAATTTCTGAAACGAGTCAAGCTGGATAGAAAGGAGATAAGGTACATCCa  <  1:893087/61‑1 (MQ=255)           aTAAATTTCTGAAACGAGTCAAGCTGGATAGAAAGGAGATAAGGTACATCCa  <  1:753679/52‑1 (MQ=255)                       aaCGAGTCAAGCTGGATAGAAAGGAGATAAGGTACATCCa  <  1:194673/40‑1 (MQ=255)                                                              | ATCTTGCTCGATAAATTTCTGAAACGAGTCAAGCTGGATAGAAAGGAGATAAGGTACATCCA  >  minE/2261017‑2261078

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑