Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	2749305	2749384	80	72 [0]	[0] 21	rpmJ	50S ribosomal subunit protein L36

AGGCTACGGCCGATAATTGGTCGCCCGAGAAGTTACGGAGAGTAAAAATGAAAGTTCGTGC  >  minE/2749244‑2749304                                                             | aGGCTACGTCCGATAATTGGTCGCCCGAGAAGTTACGGAGAGTAAAAATGAAAGTTCGTGc  <  1:536964/61‑1 (MQ=255) aGGCTACGGCCGATAATTGGTCGCCCGAGAAGTTACGGAGAGTAAAAATGAAAGTTCGTGc  <  1:2948076/61‑1 (MQ=255) aGGCTACGGCCGATAATTGGTCGCCCGAGAAGTTACGGAGAGTAAAAATGAAAGTTCGTGc  <  1:3231039/61‑1 (MQ=255) aGGCTACGGCCGATAATTGGTCGCCCGAGAAGTTACGGAGAGTAAAAATGAAAGTTCGTGc  <  1:318197/61‑1 (MQ=255) aGGCTACGGCCGATAATTGGTCGCCCGAGAAGTTACGGAGAGTAAAAATGAAAGTTCGTGc  <  1:3161405/61‑1 (MQ=255) aGGCTACGGCCGATAATTGGTCGCCCGAGAAGTTACGGAGAGTAAAAATGAAAGTTCGTGc  <  1:315207/61‑1 (MQ=255) aGGCTACGGCCGATAATTGGTCGCCCGAGAAGTTACGGAGAGTAAAAATGAAAGTTCGTGc  <  1:3033625/61‑1 (MQ=255) aGGCTACGGCCGATAATTGGTCGCCCGAGAAGTTACGGAGAGTAAAAATGAAAGTTCGTGc  <  1:3020652/61‑1 (MQ=255) aGGCTACGGCCGATAATTGGTCGCCCGAGAAGTTACGGAGAGTAAAAATGAAAGTTCGTGc  <  1:3012551/61‑1 (MQ=255) aGGCTACGGCCGATAATTGGTCGCCCGAGAAGTTACGGAGAGTAAAAATGAAAGTTCGTGc  <  1:3008882/61‑1 (MQ=255) aGGCTACGGCCGATAATTGGTCGCCCGAGAAGTTACGGAGAGTAAAAATGAAAGTTCGTGc  <  1:2965586/61‑1 (MQ=255) aGGCTACGGCCGATAATTGGTCGCCCGAGAAGTTACGGAGAGTAAAAATGAAAGTTCGTGc  <  1:323433/61‑1 (MQ=255) aGGCTACGGCCGATAATTGGTCGCCCGAGAAGTTACGGAGAGTAAAAATGAAAGTTCGTGc  <  1:287655/61‑1 (MQ=255) aGGCTACGGCCGATAATTGGTCGCCCGAGAAGTTACGGAGAGTAAAAATGAAAGTTCGTGc  <  1:2825566/61‑1 (MQ=255) aGGCTACGGCCGATAATTGGTCGCCCGAGAAGTTACGGAGAGTAAAAATGAAAGTTCGTGc  <  1:2781726/61‑1 (MQ=255) aGGCTACGGCCGATAATTGGTCGCCCGAGAAGTTACGGAGAGTAAAAATGAAAGTTCGTGc  <  1:273125/61‑1 (MQ=255) aGGCTACGGCCGATAATTGGTCGCCCGAGAAGTTACGGAGAGTAAAAATGAAAGTTCGTGc  <  1:2667354/61‑1 (MQ=255) aGGCTACGGCCGATAATTGGTCGCCCGAGAAGTTACGGAGAGTAAAAATGAAAGTTCGTGc  <  1:2627033/61‑1 (MQ=255) aGGCTACGGCCGATAATTGGTCGCCCGAGAAGTTACGGAGAGTAAAAATGAAAGTTCGTGc  <  1:2586347/61‑1 (MQ=255) aGGCTACGGCCGATAATTGGTCGCCCGAGAAGTTACGGAGAGTAAAAATGAAAGTTCGTGc  <  1:3630766/61‑1 (MQ=255) aGGCTACGGCCGATAATTGGTCGCCCGAGAAGTTACGGAGAGTAAAAATGAAAGTTCGTGc  <  1:936955/61‑1 (MQ=255) aGGCTACGGCCGATAATTGGTCGCCCGAGAAGTTACGGAGAGTAAAAATGAAAGTTCGTGc  <  1:843598/61‑1 (MQ=255) aGGCTACGGCCGATAATTGGTCGCCCGAGAAGTTACGGAGAGTAAAAATGAAAGTTCGTGc  <  1:831401/61‑1 (MQ=255) aGGCTACGGCCGATAATTGGTCGCCCGAGAAGTTACGGAGAGTAAAAATGAAAGTTCGTGc  <  1:667496/61‑1 (MQ=255) aGGCTACGGCCGATAATTGGTCGCCCGAGAAGTTACGGAGAGTAAAAATGAAAGTTCGTGc  <  1:661461/61‑1 (MQ=255) aGGCTACGGCCGATAATTGGTCGCCCGAGAAGTTACGGAGAGTAAAAATGAAAGTTCGTGc  <  1:524544/61‑1 (MQ=255) aGGCTACGGCCGATAATTGGTCGCCCGAGAAGTTACGGAGAGTAAAAATGAAAGTTCGTGc  <  1:485884/61‑1 (MQ=255) aGGCTACGGCCGATAATTGGTCGCCCGAGAAGTTACGGAGAGTAAAAATGAAAGTTCGTGc  <  1:392098/61‑1 (MQ=255) aGGCTACGGCCGATAATTGGTCGCCCGAGAAGTTACGGAGAGTAAAAATGAAAGTTCGTGc  <  1:2517456/61‑1 (MQ=255) aGGCTACGGCCGATAATTGGTCGCCCGAGAAGTTACGGAGAGTAAAAATGAAAGTTCGTGc  <  1:3605809/61‑1 (MQ=255) aGGCTACGGCCGATAATTGGTCGCCCGAGAAGTTACGGAGAGTAAAAATGAAAGTTCGTGc  <  1:3572428/61‑1 (MQ=255) aGGCTACGGCCGATAATTGGTCGCCCGAGAAGTTACGGAGAGTAAAAATGAAAGTTCGTGc  <  1:349939/61‑1 (MQ=255) aGGCTACGGCCGATAATTGGTCGCCCGAGAAGTTACGGAGAGTAAAAATGAAAGTTCGTGc  <  1:3405117/61‑1 (MQ=255) aGGCTACGGCCGATAATTGGTCGCCCGAGAAGTTACGGAGAGTAAAAATGAAAGTTCGTGc  <  1:3397019/61‑1 (MQ=255) aGGCTACGGCCGATAATTGGTCGCCCGAGAAGTTACGGAGAGTAAAAATGAAAGTTCGTGc  <  1:336968/61‑1 (MQ=255) aGGCTACGGCCGATAATTGGTCGCCCGAGAAGTTACGGAGAGTAAAAATGAAAGTTCGTGc  <  1:333998/61‑1 (MQ=255) aGGCTACGGCCGATAATTGGTCGCCCGAGAAGTTACGGAGAGTAAAAATGAAAGTTCGTGc  <  1:1741984/61‑1 (MQ=255) aGGCTACGGCCGATAATTGGTCGCCCGAGAAGTTACGGAGAGTAAAAATGAAAGTTCGTGc  <  1:1018571/61‑1 (MQ=255) aGGCTACGGCCGATAATTGGTCGCCCGAGAAGTTACGGAGAGTAAAAATGAAAGTTCGTGc  <  1:1029919/61‑1 (MQ=255) aGGCTACGGCCGATAATTGGTCGCCCGAGAAGTTACGGAGAGTAAAAATGAAAGTTCGTGc  <  1:1192317/61‑1 (MQ=255) aGGCTACGGCCGATAATTGGTCGCCCGAGAAGTTACGGAGAGTAAAAATGAAAGTTCGTGc  <  1:134747/61‑1 (MQ=255) aGGCTACGGCCGATAATTGGTCGCCCGAGAAGTTACGGAGAGTAAAAATGAAAGTTCGTGc  <  1:1363629/61‑1 (MQ=255) aGGCTACGGCCGATAATTGGTCGCCCGAGAAGTTACGGAGAGTAAAAATGAAAGTTCGTGc  <  1:1388166/61‑1 (MQ=255) aGGCTACGGCCGATAATTGGTCGCCCGAGAAGTTACGGAGAGTAAAAATGAAAGTTCGTGc  <  1:1451739/61‑1 (MQ=255) aGGCTACGGCCGATAATTGGTCGCCCGAGAAGTTACGGAGAGTAAAAATGAAAGTTCGTGc  <  1:1557340/61‑1 (MQ=255) aGGCTACGGCCGATAATTGGTCGCCCGAGAAGTTACGGAGAGTAAAAATGAAAGTTCGTGc  <  1:159749/61‑1 (MQ=255) aGGCTACGGCCGATAATTGGTCGCCCGAGAAGTTACGGAGAGTAAAAATGAAAGTTCGTGc  <  1:1639815/61‑1 (MQ=255) aGGCTACGGCCGATAATTGGTCGCCCGAGAAGTTACGGAGAGTAAAAATGAAAGTTCGTGc  <  1:1675065/61‑1 (MQ=255) aGGCTACGGCCGATAATTGGTCGCCCGAGAAGTTACGGAGAGTAAAAATGAAAGTTCGTGc  <  1:1679833/61‑1 (MQ=255) aGGCTACGGCCGATAATTGGTCGCCCGAGAAGTTACGGAGAGTAAAAATGAAAGTTCGTGc  <  1:1692596/61‑1 (MQ=255) aGGCTACGGCCGATAATTGGTCGCCCGAGAAGTTACGGAGAGTAAAAATGAAAGTTCGTGc  <  1:1015377/61‑1 (MQ=255) aGGCTACGGCCGATAATTGGTCGCCCGAGAAGTTACGGAGAGTAAAAATGAAAGTTCGTGc  <  1:1817478/61‑1 (MQ=255) aGGCTACGGCCGATAATTGGTCGCCCGAGAAGTTACGGAGAGTAAAAATGAAAGTTCGTGc  <  1:1904892/61‑1 (MQ=255) aGGCTACGGCCGATAATTGGTCGCCCGAGAAGTTACGGAGAGTAAAAATGAAAGTTCGTGc  <  1:2494621/61‑1 (MQ=255) aGGCTACGGCCGATAATTGGTCGCCCGAGAAGTTACGGAGAGTAAAAATGAAAGTTCGTGc  <  1:2417361/61‑1 (MQ=255) aGGCTACGGCCGATAATTGGTCGCCCGAGAAGTTACGGAGAGTAAAAATGAAAGTTCGTGc  <  1:2346026/61‑1 (MQ=255) aGGCTACGGCCGATAATTGGTCGCCCGAGAAGTTACGGAGAGTAAAAATGAAAGTTCGTGc  <  1:233807/61‑1 (MQ=255) aGGCTACGGCCGATAATTGGTCGCCCGAGAAGTTACGGAGAGTAAAAATGAAAGTTCGTGc  <  1:2328717/61‑1 (MQ=255) aGGCTACGGCCGATAATTGGTCGCCCGAGAAGTTACGGAGAGTAAAAATGAAAGTTCGTGc  <  1:2317825/61‑1 (MQ=255) aGGCTACGGCCGATAATTGGTCGCCCGAGAAGTTACGGAGAGTAAAAATGAAAGTTCGTGc  <  1:2315744/61‑1 (MQ=255) aGGCTACGGCCGATAATTGGTCGCCCGAGAAGTTACGGAGAGTAAAAATGAAAGTTCGTGc  <  1:2245572/61‑1 (MQ=255) aGGCTACGGCCGATAATTGGTCGCCCGAGAAGTTACGGAGAGTAAAAATGAAAGTTCGTGc  <  1:2200803/61‑1 (MQ=255) aGGCTACGGCCGATAATTGGTCGCCCGAGAAGTTACGGAGAGTAAAAATGAAAGTTCGTGc  <  1:2119905/61‑1 (MQ=255) aGGCTACGGCCGATAATTGGTCGCCCGAGAAGTTACGGAGAGTAAAAATGAAAGTTCGTGc  <  1:2090863/61‑1 (MQ=255) aGGCTACGGCCGATAATTGGTCGCCCGAGAAGTTACGGAGAGTAAAAATGAAAGTTCGTGc  <  1:2060151/61‑1 (MQ=255) aGGCTACGGCCGATAATTGGTCGCCCGAGAAGTTACGGAGAGTAAAAATGAAAGTTCGTGc  <  1:1905635/61‑1 (MQ=255) aGGCTACGGCCGATAATTGGTCGCCCGAGAAGTTACGGAGAGTAAAAATGAAAGTTCGTGc  <  1:1899649/61‑1 (MQ=255)  ggCTACGGCCGATAATTGGTCGCCCGAGAAGTTACGGAGAGTAAAAATGAAAGTTCGTGc  <  1:1441360/60‑1 (MQ=255)     tACGGCCGATAATTGGTCGCCCGAGAAGTTACGGAGAGTAAAAATGAAAGTTCGTGc  <  1:2512389/57‑1 (MQ=255)                 ttGGTCGCCCGAGAAGTTACGGAGAGTAAAAATGAAAGTTCGTGc  <  1:1610998/45‑1 (MQ=255)                 ttGGTCGCCCGAGAAGTTACGGAGAGTAAAAATGAAAGTTCGTGc  <  1:1438100/45‑1 (MQ=255)                         ccGAGAAGTTACGGAGAGTAAAAATGAAAGTTCGTGc  <  1:1119123/37‑1 (MQ=255)                                                             | AGGCTACGGCCGATAATTGGTCGCCCGAGAAGTTACGGAGAGTAAAAATGAAAGTTCGTGC  >  minE/2749244‑2749304

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑