Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	2816654	2816657	4	30 [0]	[0] 19	soxR	DNA‑binding transcriptional dual regulator, Fe‑S center for redox‑sensing

TGGAAACAGCTTTCGTCCCAATGGCGAGAAGAGTTGGATCG  >  minE/2816613‑2816653                                         | tGGAAACAGCTTTCGTCCCAATGGCGAGAAGAGTTGGATCg  <  1:1042059/41‑1 (MQ=255) tGGAAACAGCTTTCGTCCCAATGGCGAGAAGAGTTGGATCg  <  1:871060/41‑1 (MQ=255) tGGAAACAGCTTTCGTCCCAATGGCGAGAAGAGTTGGATCg  <  1:740893/41‑1 (MQ=255) tGGAAACAGCTTTCGTCCCAATGGCGAGAAGAGTTGGATCg  <  1:664280/41‑1 (MQ=255) tGGAAACAGCTTTCGTCCCAATGGCGAGAAGAGTTGGATCg  <  1:64524/41‑1 (MQ=255) tGGAAACAGCTTTCGTCCCAATGGCGAGAAGAGTTGGATCg  <  1:430328/41‑1 (MQ=255) tGGAAACAGCTTTCGTCCCAATGGCGAGAAGAGTTGGATCg  <  1:362692/41‑1 (MQ=255) tGGAAACAGCTTTCGTCCCAATGGCGAGAAGAGTTGGATCg  <  1:3572095/41‑1 (MQ=255) tGGAAACAGCTTTCGTCCCAATGGCGAGAAGAGTTGGATCg  <  1:3560434/41‑1 (MQ=255) tGGAAACAGCTTTCGTCCCAATGGCGAGAAGAGTTGGATCg  <  1:3512670/41‑1 (MQ=255) tGGAAACAGCTTTCGTCCCAATGGCGAGAAGAGTTGGATCg  <  1:3406961/41‑1 (MQ=255) tGGAAACAGCTTTCGTCCCAATGGCGAGAAGAGTTGGATCg  <  1:339584/41‑1 (MQ=255) tGGAAACAGCTTTCGTCCCAATGGCGAGAAGAGTTGGATCg  <  1:3344956/41‑1 (MQ=255) tGGAAACAGCTTTCGTCCCAATGGCGAGAAGAGTTGGATCg  <  1:3254716/41‑1 (MQ=255) tGGAAACAGCTTTCGTCCCAATGGCGAGAAGAGTTGGATCg  <  1:3221416/41‑1 (MQ=255) tGGAAACAGCTTTCGTCCCAATGGCGAGAAGAGTTGGATCg  <  1:3054770/41‑1 (MQ=255) tGGAAACAGCTTTCGTCCCAATGGCGAGAAGAGTTGGATCg  <  1:2981348/41‑1 (MQ=255) tGGAAACAGCTTTCGTCCCAATGGCGAGAAGAGTTGGATCg  <  1:2823529/41‑1 (MQ=255) tGGAAACAGCTTTCGTCCCAATGGCGAGAAGAGTTGGATCg  <  1:257063/41‑1 (MQ=255) tGGAAACAGCTTTCGTCCCAATGGCGAGAAGAGTTGGATCg  <  1:242031/41‑1 (MQ=255) tGGAAACAGCTTTCGTCCCAATGGCGAGAAGAGTTGGATCg  <  1:2336313/41‑1 (MQ=255) tGGAAACAGCTTTCGTCCCAATGGCGAGAAGAGTTGGATCg  <  1:2315228/41‑1 (MQ=255) tGGAAACAGCTTTCGTCCCAATGGCGAGAAGAGTTGGATCg  <  1:2117699/41‑1 (MQ=255) tGGAAACAGCTTTCGTCCCAATGGCGAGAAGAGTTGGATCg  <  1:1922057/41‑1 (MQ=255) tGGAAACAGCTTTCGTCCCAATGGCGAGAAGAGTTGGATCg  <  1:1787134/41‑1 (MQ=255) tGGAAACAGCTTTCGTCCCAATGGCGAGAAGAGTTGGATCg  <  1:1338021/41‑1 (MQ=255) tGGAAACAGCTTTCGTCCCAATGGCGAGAAGAGTTGGATCg  <  1:1003939/41‑1 (MQ=255) tGGAAACAGCTTTCGTCCCAATGGCGAGAAGAGGTGGATCg  <  1:3225594/41‑1 (MQ=255)  ggAAACAGCTTTCGTCCCAATGGCGAGAAGAGTTGGATCg  <  1:3225180/40‑1 (MQ=255)  ggAAACAGCTTTCGTCCCAATGGCGAGAAGAGTTGGATCg  <  1:725684/40‑1 (MQ=255)                                         | TGGAAACAGCTTTCGTCCCAATGGCGAGAAGAGTTGGATCG  >  minE/2816613‑2816653

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑