Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	258950	258980	31	61 [0]	[0] 38	secF/yajD	SecYEG protein translocase auxillary subunit/conserved hypothetical protein

CATGTTGCAGCAGAAAGTGGAAAAAGAAGGGGCGGATCAGCCGTCAATTCTGCCGTAATCAA  >  minE/258888‑258949                                                              | caTGTTGCAGCAGAAAGTGGAAAAAGAAGGGGCTGATCAGCCGTCAATTCTGCCGTAATCaa  <  1:3558780/62‑1 (MQ=255) caTGTTGCAGCAGAAAGTGGAAAAAGAAGGGGCGGATCAGCCGTCTATTCTGCCGTAATCaa  <  1:2333627/62‑1 (MQ=255) caTGTTGCAGCAGAAAGTGGAAAAAGAAGGGGCGGATCAGCCGTCAATTCTGCCGTAATCaa  <  1:3502535/62‑1 (MQ=255) caTGTTGCAGCAGAAAGTGGAAAAAGAAGGGGCGGATCAGCCGTCAATTCTGCCGTAATCaa  <  1:2710869/62‑1 (MQ=255) caTGTTGCAGCAGAAAGTGGAAAAAGAAGGGGCGGATCAGCCGTCAATTCTGCCGTAATCaa  <  1:278647/62‑1 (MQ=255) caTGTTGCAGCAGAAAGTGGAAAAAGAAGGGGCGGATCAGCCGTCAATTCTGCCGTAATCaa  <  1:2804006/62‑1 (MQ=255) caTGTTGCAGCAGAAAGTGGAAAAAGAAGGGGCGGATCAGCCGTCAATTCTGCCGTAATCaa  <  1:2877297/62‑1 (MQ=255) caTGTTGCAGCAGAAAGTGGAAAAAGAAGGGGCGGATCAGCCGTCAATTCTGCCGTAATCaa  <  1:2918232/62‑1 (MQ=255) caTGTTGCAGCAGAAAGTGGAAAAAGAAGGGGCGGATCAGCCGTCAATTCTGCCGTAATCaa  <  1:2951612/62‑1 (MQ=255) caTGTTGCAGCAGAAAGTGGAAAAAGAAGGGGCGGATCAGCCGTCAATTCTGCCGTAATCaa  <  1:295399/62‑1 (MQ=255) caTGTTGCAGCAGAAAGTGGAAAAAGAAGGGGCGGATCAGCCGTCAATTCTGCCGTAATCaa  <  1:2972614/62‑1 (MQ=255) caTGTTGCAGCAGAAAGTGGAAAAAGAAGGGGCGGATCAGCCGTCAATTCTGCCGTAATCaa  <  1:302625/62‑1 (MQ=255) caTGTTGCAGCAGAAAGTGGAAAAAGAAGGGGCGGATCAGCCGTCAATTCTGCCGTAATCaa  <  1:3083740/62‑1 (MQ=255) caTGTTGCAGCAGAAAGTGGAAAAAGAAGGGGCGGATCAGCCGTCAATTCTGCCGTAATCaa  <  1:3168548/62‑1 (MQ=255) caTGTTGCAGCAGAAAGTGGAAAAAGAAGGGGCGGATCAGCCGTCAATTCTGCCGTAATCaa  <  1:3286563/62‑1 (MQ=255) caTGTTGCAGCAGAAAGTGGAAAAAGAAGGGGCGGATCAGCCGTCAATTCTGCCGTAATCaa  <  1:3379069/62‑1 (MQ=255) caTGTTGCAGCAGAAAGTGGAAAAAGAAGGGGCGGATCAGCCGTCAATTCTGCCGTAATCaa  <  1:3487522/62‑1 (MQ=255) caTGTTGCAGCAGAAAGTGGAAAAAGAAGGGGCGGATCAGCCGTCAATTCTGCCGTAATCaa  <  1:270752/62‑1 (MQ=255) caTGTTGCAGCAGAAAGTGGAAAAAGAAGGGGCGGATCAGCCGTCAATTCTGCCGTAATCaa  <  1:3611818/62‑1 (MQ=255) caTGTTGCAGCAGAAAGTGGAAAAAGAAGGGGCGGATCAGCCGTCAATTCTGCCGTAATCaa  <  1:3634527/62‑1 (MQ=255) caTGTTGCAGCAGAAAGTGGAAAAAGAAGGGGCGGATCAGCCGTCAATTCTGCCGTAATCaa  <  1:456045/62‑1 (MQ=255) caTGTTGCAGCAGAAAGTGGAAAAAGAAGGGGCGGATCAGCCGTCAATTCTGCCGTAATCaa  <  1:471667/62‑1 (MQ=255) caTGTTGCAGCAGAAAGTGGAAAAAGAAGGGGCGGATCAGCCGTCAATTCTGCCGTAATCaa  <  1:569024/62‑1 (MQ=255) caTGTTGCAGCAGAAAGTGGAAAAAGAAGGGGCGGATCAGCCGTCAATTCTGCCGTAATCaa  <  1:57388/62‑1 (MQ=255) caTGTTGCAGCAGAAAGTGGAAAAAGAAGGGGCGGATCAGCCGTCAATTCTGCCGTAATCaa  <  1:798583/62‑1 (MQ=255) caTGTTGCAGCAGAAAGTGGAAAAAGAAGGGGCGGATCAGCCGTCAATTCTGCCGTAATCaa  <  1:814842/62‑1 (MQ=255) caTGTTGCAGCAGAAAGTGGAAAAAGAAGGGGCGGATCAGCCGTCAATTCTGCCGTAATCaa  <  1:831778/62‑1 (MQ=255) caTGTTGCAGCAGAAAGTGGAAAAAGAAGGGGCGGATCAGCCGTCAATTCTGCCGTAATCaa  <  1:870262/62‑1 (MQ=255) caTGTTGCAGCAGAAAGTGGAAAAAGAAGGGGCGGATCAGCCGTCAATTCTGCCGTAATCaa  <  1:896478/62‑1 (MQ=255) caTGTTGCAGCAGAAAGTGGAAAAAGAAGGGGCGGATCAGCCGTCAATTCTGCCGTAATCaa  <  1:942967/62‑1 (MQ=255) caTGTTGCAGCAGAAAGTGGAAAAAGAAGGGGCGGATCAGCCGTCAATTCTGCCGTAATCaa  <  1:961049/62‑1 (MQ=255) caTGTTGCAGCAGAAAGTGGAAAAAGAAGGGGCGGATCAGCCGTCAATTCTGCCGTAATCaa  <  1:2063901/62‑1 (MQ=255) caTGTTGCAGCAGAAAGTGGAAAAAGAAGGGGCGGATCAGCCGTCAATTCTGCCGTAATCaa  <  1:1032235/62‑1 (MQ=255) caTGTTGCAGCAGAAAGTGGAAAAAGAAGGGGCGGATCAGCCGTCAATTCTGCCGTAATCaa  <  1:1206899/62‑1 (MQ=255) caTGTTGCAGCAGAAAGTGGAAAAAGAAGGGGCGGATCAGCCGTCAATTCTGCCGTAATCaa  <  1:1245608/62‑1 (MQ=255) caTGTTGCAGCAGAAAGTGGAAAAAGAAGGGGCGGATCAGCCGTCAATTCTGCCGTAATCaa  <  1:1364474/62‑1 (MQ=255) caTGTTGCAGCAGAAAGTGGAAAAAGAAGGGGCGGATCAGCCGTCAATTCTGCCGTAATCaa  <  1:1488575/62‑1 (MQ=255) caTGTTGCAGCAGAAAGTGGAAAAAGAAGGGGCGGATCAGCCGTCAATTCTGCCGTAATCaa  <  1:158283/62‑1 (MQ=255) caTGTTGCAGCAGAAAGTGGAAAAAGAAGGGGCGGATCAGCCGTCAATTCTGCCGTAATCaa  <  1:1647095/62‑1 (MQ=255) caTGTTGCAGCAGAAAGTGGAAAAAGAAGGGGCGGATCAGCCGTCAATTCTGCCGTAATCaa  <  1:1776391/62‑1 (MQ=255) caTGTTGCAGCAGAAAGTGGAAAAAGAAGGGGCGGATCAGCCGTCAATTCTGCCGTAATCaa  <  1:1808265/62‑1 (MQ=255) caTGTTGCAGCAGAAAGTGGAAAAAGAAGGGGCGGATCAGCCGTCAATTCTGCCGTAATCaa  <  1:1852089/62‑1 (MQ=255) caTGTTGCAGCAGAAAGTGGAAAAAGAAGGGGCGGATCAGCCGTCAATTCTGCCGTAATCaa  <  1:18573/62‑1 (MQ=255) caTGTTGCAGCAGAAAGTGGAAAAAGAAGGGGCGGATCAGCCGTCAATTCTGCCGTAATCaa  <  1:1972867/62‑1 (MQ=255) caTGTTGCAGCAGAAAGTGGAAAAAGAAGGGGCGGATCAGCCGTCAATTCTGCCGTAATCaa  <  1:1024244/62‑1 (MQ=255) caTGTTGCAGCAGAAAGTGGAAAAAGAAGGGGCGGATCAGCCGTCAATTCTGCCGTAATCaa  <  1:2066858/62‑1 (MQ=255) caTGTTGCAGCAGAAAGTGGAAAAAGAAGGGGCGGATCAGCCGTCAATTCTGCCGTAATCaa  <  1:2178692/62‑1 (MQ=255) caTGTTGCAGCAGAAAGTGGAAAAAGAAGGGGCGGATCAGCCGTCAATTCTGCCGTAATCaa  <  1:2203797/62‑1 (MQ=255) caTGTTGCAGCAGAAAGTGGAAAAAGAAGGGGCGGATCAGCCGTCAATTCTGCCGTAATCaa  <  1:2251897/62‑1 (MQ=255) caTGTTGCAGCAGAAAGTGGAAAAAGAAGGGGCGGATCAGCCGTCAATTCTGCCGTAATCaa  <  1:2267712/62‑1 (MQ=255) caTGTTGCAGCAGAAAGTGGAAAAAGAAGGGGCGGATCAGCCGTCAATTCTGCCGTAATCaa  <  1:2272023/62‑1 (MQ=255) caTGTTGCAGCAGAAAGTGGAAAAAGAAGGGGCGGATCAGCCGTCAATTCTGCCGTAATCaa  <  1:2274321/62‑1 (MQ=255) caTGTTGCAGCAGAAAGTGGAAAAAGAAGGGGCGGATCAGCCGTCAATTCTGCCGTAATCaa  <  1:2428410/62‑1 (MQ=255) caTGTTGCAGCAGAAAGTGGAAAAAGAAGGGGCGGATCAGCCGTCAATTCTGCCGTAATCaa  <  1:2456772/62‑1 (MQ=255) caTGTTGCAGCAGAAAGTGGAAAAAGAAGGGGCGGATCAGCCGTCAATTCTGCCGTAATCaa  <  1:2468492/62‑1 (MQ=255) caTGTTGCAGCAGAAAGTGGAAAAAGAAGGGGCGGATCAGCCGTCAATTCTGCCGTAATCaa  <  1:2513243/62‑1 (MQ=255) caTGTTGCAGCAGAAAGTGGAAAAAGAAGGGGCGGATCAGCCGTCAATTCTGCCGTAATCaa  <  1:25202/62‑1 (MQ=255) caTGTTGCAGCAGAAAGTGGAAAAAGAAGGGGCGGATCAGCCGTCAATTCTGCCGTAATCaa  <  1:2632411/62‑1 (MQ=255) caTGTTGCAGCAGAAAGTGGAAAAAGAAGGGGCGGATCAGCCGTCAATTCTGCCGTAATCaa  <  1:2664954/62‑1 (MQ=255) caTGTTGCAGCAGAAAGTGGAAAAAGAAGGGGCGGATCAGCCGGCAATTCTGCCGTAATCaa  <  1:881095/62‑1 (MQ=255)      tGCAGCAGAAAGTGGAAAAAGAAGGGGCGGAGCAGCCGTCAATTCTGCCGTAATCaa  <  1:1977651/57‑1 (MQ=255)                                                              | CATGTTGCAGCAGAAAGTGGAAAAAGAAGGGGCGGATCAGCCGTCAATTCTGCCGTAATCAA  >  minE/258888‑258949

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑