Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	2965048	2965076	29	65 [0]	[0] 43	deoA	thymidine phosphorylase

CAGTTCACTGGCTCCGGCTGATAAACGTTTCTACGCGACCCGTGATATTACCGCAACCG  >  minE/2964989‑2965047                                                           | gaGTTCACTGGCTCCGGCTGATAAACGTTTCTACGCGACCCGTGATATTACCGCAACCg  <  1:1299109/58‑1 (MQ=255) cAGTTCACTGGCTCGGGCTGATAAACGTTTCTACGCGACCCGTGATATTACCGCAACCg  <  1:567291/59‑1 (MQ=255) cAGTTCACTGGCTCCGTCTGATAAACGTTTCTACGCGACCCGTGATATTACCGCAACCg  <  1:1473152/59‑1 (MQ=255) cAGTTCACTGGCTCCGGCTGATAAACTTTTCTACGCGACCCGTGATATTACCGCAACCg  <  1:2143327/59‑1 (MQ=255) cAGTTCACTGGCTCCGGCTGATAAACGTTTCTACGCGACCCGTTATATTACCGCAACCg  <  1:1402334/59‑1 (MQ=255) cAGTTCACTGGCTCCGGCTGATAAACGTTTCTACGCGACCCGTGATATTACCGCAACCg  <  1:2962509/59‑1 (MQ=255) cAGTTCACTGGCTCCGGCTGATAAACGTTTCTACGCGACCCGTGATATTACCGCAACCg  <  1:3228829/59‑1 (MQ=255) cAGTTCACTGGCTCCGGCTGATAAACGTTTCTACGCGACCCGTGATATTACCGCAACCg  <  1:3148880/59‑1 (MQ=255) cAGTTCACTGGCTCCGGCTGATAAACGTTTCTACGCGACCCGTGATATTACCGCAACCg  <  1:3144932/59‑1 (MQ=255) cAGTTCACTGGCTCCGGCTGATAAACGTTTCTACGCGACCCGTGATATTACCGCAACCg  <  1:3135490/59‑1 (MQ=255) cAGTTCACTGGCTCCGGCTGATAAACGTTTCTACGCGACCCGTGATATTACCGCAACCg  <  1:3114986/59‑1 (MQ=255) cAGTTCACTGGCTCCGGCTGATAAACGTTTCTACGCGACCCGTGATATTACCGCAACCg  <  1:3079534/59‑1 (MQ=255) cAGTTCACTGGCTCCGGCTGATAAACGTTTCTACGCGACCCGTGATATTACCGCAACCg  <  1:3060908/59‑1 (MQ=255) cAGTTCACTGGCTCCGGCTGATAAACGTTTCTACGCGACCCGTGATATTACCGCAACCg  <  1:3023447/59‑1 (MQ=255) cAGTTCACTGGCTCCGGCTGATAAACGTTTCTACGCGACCCGTGATATTACCGCAACCg  <  1:3342848/59‑1 (MQ=255) cAGTTCACTGGCTCCGGCTGATAAACGTTTCTACGCGACCCGTGATATTACCGCAACCg  <  1:2872280/59‑1 (MQ=255) cAGTTCACTGGCTCCGGCTGATAAACGTTTCTACGCGACCCGTGATATTACCGCAACCg  <  1:2823987/59‑1 (MQ=255) cAGTTCACTGGCTCCGGCTGATAAACGTTTCTACGCGACCCGTGATATTACCGCAACCg  <  1:2782099/59‑1 (MQ=255) cAGTTCACTGGCTCCGGCTGATAAACGTTTCTACGCGACCCGTGATATTACCGCAACCg  <  1:276426/59‑1 (MQ=255) cAGTTCACTGGCTCCGGCTGATAAACGTTTCTACGCGACCCGTGATATTACCGCAACCg  <  1:3297210/59‑1 (MQ=255) cAGTTCACTGGCTCCGGCTGATAAACGTTTCTACGCGACCCGTGATATTACCGCAACCg  <  1:121243/59‑1 (MQ=255) cAGTTCACTGGCTCCGGCTGATAAACGTTTCTACGCGACCCGTGATATTACCGCAACCg  <  1:3361642/59‑1 (MQ=255) cAGTTCACTGGCTCCGGCTGATAAACGTTTCTACGCGACCCGTGATATTACCGCAACCg  <  1:3426150/59‑1 (MQ=255) cAGTTCACTGGCTCCGGCTGATAAACGTTTCTACGCGACCCGTGATATTACCGCAACCg  <  1:3475071/59‑1 (MQ=255) cAGTTCACTGGCTCCGGCTGATAAACGTTTCTACGCGACCCGTGATATTACCGCAACCg  <  1:3482506/59‑1 (MQ=255) cAGTTCACTGGCTCCGGCTGATAAACGTTTCTACGCGACCCGTGATATTACCGCAACCg  <  1:3585111/59‑1 (MQ=255) cAGTTCACTGGCTCCGGCTGATAAACGTTTCTACGCGACCCGTGATATTACCGCAACCg  <  1:379539/59‑1 (MQ=255) cAGTTCACTGGCTCCGGCTGATAAACGTTTCTACGCGACCCGTGATATTACCGCAACCg  <  1:381481/59‑1 (MQ=255) cAGTTCACTGGCTCCGGCTGATAAACGTTTCTACGCGACCCGTGATATTACCGCAACCg  <  1:385401/59‑1 (MQ=255) cAGTTCACTGGCTCCGGCTGATAAACGTTTCTACGCGACCCGTGATATTACCGCAACCg  <  1:57710/59‑1 (MQ=255) cAGTTCACTGGCTCCGGCTGATAAACGTTTCTACGCGACCCGTGATATTACCGCAACCg  <  1:611319/59‑1 (MQ=255) cAGTTCACTGGCTCCGGCTGATAAACGTTTCTACGCGACCCGTGATATTACCGCAACCg  <  1:846413/59‑1 (MQ=255) cAGTTCACTGGCTCCGGCTGATAAACGTTTCTACGCGACCCGTGATATTACCGCAACCg  <  1:2568615/59‑1 (MQ=255) cAGTTCACTGGCTCCGGCTGATAAACGTTTCTACGCGACCCGTGATATTACCGCAACCg  <  1:1204804/59‑1 (MQ=255) cAGTTCACTGGCTCCGGCTGATAAACGTTTCTACGCGACCCGTGATATTACCGCAACCg  <  1:1360812/59‑1 (MQ=255) cAGTTCACTGGCTCCGGCTGATAAACGTTTCTACGCGACCCGTGATATTACCGCAACCg  <  1:1439082/59‑1 (MQ=255) cAGTTCACTGGCTCCGGCTGATAAACGTTTCTACGCGACCCGTGATATTACCGCAACCg  <  1:1484499/59‑1 (MQ=255) cAGTTCACTGGCTCCGGCTGATAAACGTTTCTACGCGACCCGTGATATTACCGCAACCg  <  1:1826968/59‑1 (MQ=255) cAGTTCACTGGCTCCGGCTGATAAACGTTTCTACGCGACCCGTGATATTACCGCAACCg  <  1:1850362/59‑1 (MQ=255) cAGTTCACTGGCTCCGGCTGATAAACGTTTCTACGCGACCCGTGATATTACCGCAACCg  <  1:1884017/59‑1 (MQ=255) cAGTTCACTGGCTCCGGCTGATAAACGTTTCTACGCGACCCGTGATATTACCGCAACCg  <  1:1943089/59‑1 (MQ=255) cAGTTCACTGGCTCCGGCTGATAAACGTTTCTACGCGACCCGTGATATTACCGCAACCg  <  1:2047581/59‑1 (MQ=255) cAGTTCACTGGCTCCGGCTGATAAACGTTTCTACGCGACCCGTGATATTACCGCAACCg  <  1:2076588/59‑1 (MQ=255) cAGTTCACTGGCTCCGGCTGATAAACGTTTCTACGCGACCCGTGATATTACCGCAACCg  <  1:2128990/59‑1 (MQ=255) cAGTTCACTGGCTCCGGCTGATAAACGTTTCTACGCGACCCGTGATATTACCGCAACCg  <  1:2154197/59‑1 (MQ=255) cAGTTCACTGGCTCCGGCTGATAAACGTTTCTACGCGACCCGTGATATTACCGCAACCg  <  1:2188584/59‑1 (MQ=255) cAGTTCACTGGCTCCGGCTGATAAACGTTTCTACGCGACCCGTGATATTACCGCAACCg  <  1:2578893/59‑1 (MQ=255) cAGTTCACTGGCTCCGGCTGATAAACGTTTCTACGCGACCCGTGATATTACCGCAACCg  <  1:2526377/59‑1 (MQ=255) cAGTTCACTGGCTCCGGCTGATAAACGTTTCTACGCGACCCGTGATATTACCGCAACCg  <  1:2508023/59‑1 (MQ=255) cAGTTCACTGGCTCCGGCTGATAAACGTTTCTACGCGACCCGTGATATTACCGCAACCg  <  1:2359901/59‑1 (MQ=255) cAGTTCACTGGCTCCGGCTGATAAACGTTTCTACGCGACCCGTGATATTACCGCAACCg  <  1:2356735/59‑1 (MQ=255) cAGTTCACTGGCTCCGGCTGATAAACGTTTCTACGCGACCCGTGATATTACCGCAACCg  <  1:2322618/59‑1 (MQ=255) cAGTTCACTGGCTCCGGCTGATAAACGTTTCTACGCGACCCGTGATATTACCGCAACCg  <  1:2316835/59‑1 (MQ=255) cAGTTCACTGGCTCCGGCTGATAAACGTTTCTACGCGACCCGTGATATTACCGCAACCg  <  1:2207579/59‑1 (MQ=255) cAGTTCACTGGCTCCGGCTGATAAACGTTTCTACGCGACCCGTGATATTACCGCAACCg  <  1:2183518/59‑1 (MQ=255) cAGTTCACTGGCCCCGGCTGATAAACGTTTCTACGCGACCCGTGATATTACCGCAACCg  <  1:2239430/59‑1 (MQ=255)  aGTTCACTGGCTCCGGCTGATAAACGTTTCTACGCGACCCGTGATATTACCGCAACCg  <  1:776948/58‑1 (MQ=255)  aGTTCACTGGCTCCGGCTGATAAACGTTTCTACGCGACCCGTGATATTACCGCAACCg  <  1:788567/58‑1 (MQ=255)   gTTCACTGGCTCCGGCTGATAAACGTTTCTACGCGACCCGTGATATTACCGCAACCg  <  1:3537826/57‑1 (MQ=255)   gTTCACTGGCTCCGGCTGATAAACGTTTCTACGCGACCCGTGATATTACCGCAACCg  <  1:1619019/57‑1 (MQ=255)   gTTCACTGGCTCCGGCTGATAAACGTTTCTACGCGACCCGTGATATTACCGCAACCg  <  1:842625/57‑1 (MQ=255)    ttCACTTGCTCCGGCTGATAAACGTTTCTACGCGACCCTTGATATTACCGCAACCg  <  1:1424000/56‑1 (MQ=255)                    gATAAACGTTTCTACGCGACCCGTGATATTACCGCAACCg  <  1:2234669/40‑1 (MQ=255)                    gATAAACGTTTCTACGCGACCAGTGATATTACCGCAACCg  <  1:1212615/40‑1 (MQ=255)                      tAAACGTTTCTACGCGACCCGTGATATTACCGCAACCg  <  1:876962/38‑1 (MQ=255)                                                           | CAGTTCACTGGCTCCGGCTGATAAACGTTTCTACGCGACCCGTGATATTACCGCAACCG  >  minE/2964989‑2965047

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑