Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	360959	360979	21	38 [0]	[0] 4	sfmD	predicted outer membrane export usher protein

CTGGCGCAGGCGGTGTACGCATTGAAAATCAAACTGGCATTTTAACCGACTGGCGCGGCTAT  >  minE/360897‑360958                                                              | cttgcgcAGGCGGTGTACGCATTGAAAATCAAACTGGCATTTTAACCGACTGGCGCGGCTAt  >  1:2542966/4‑62 (MQ=255) cTGGCGCAGGCGGTGTACGCATTGAAAATCAAACTGGCATTTTACCCGACTGGCGCGGCTAt  >  1:809132/1‑62 (MQ=255) cTGGCGCAGGCGGTGTACGCATTGAAAATCAAACTGGCATTTTAACCTACTGGCGCGGCTAt  >  1:2887147/1‑62 (MQ=255) cTGGCGCAGGCGGTGTACGCATTGAAAATCAAACTGGCATTTTAACCGACTGGCGCGGCTAt  >  1:3599815/1‑62 (MQ=255) cTGGCGCAGGCGGTGTACGCATTGAAAATCAAACTGGCATTTTAACCGACTGGCGCGGCTAt  >  1:3054584/1‑62 (MQ=255) cTGGCGCAGGCGGTGTACGCATTGAAAATCAAACTGGCATTTTAACCGACTGGCGCGGCTAt  >  1:3080807/1‑62 (MQ=255) cTGGCGCAGGCGGTGTACGCATTGAAAATCAAACTGGCATTTTAACCGACTGGCGCGGCTAt  >  1:3128850/1‑62 (MQ=255) cTGGCGCAGGCGGTGTACGCATTGAAAATCAAACTGGCATTTTAACCGACTGGCGCGGCTAt  >  1:3145880/1‑62 (MQ=255) cTGGCGCAGGCGGTGTACGCATTGAAAATCAAACTGGCATTTTAACCGACTGGCGCGGCTAt  >  1:3428769/1‑62 (MQ=255) cTGGCGCAGGCGGTGTACGCATTGAAAATCAAACTGGCATTTTAACCGACTGGCGCGGCTAt  >  1:349524/1‑62 (MQ=255) cTGGCGCAGGCGGTGTACGCATTGAAAATCAAACTGGCATTTTAACCGACTGGCGCGGCTAt  >  1:358790/1‑62 (MQ=255) cTGGCGCAGGCGGTGTACGCATTGAAAATCAAACTGGCATTTTAACCGACTGGCGCGGCTAt  >  1:2933475/1‑62 (MQ=255) cTGGCGCAGGCGGTGTACGCATTGAAAATCAAACTGGCATTTTAACCGACTGGCGCGGCTAt  >  1:3646099/1‑62 (MQ=255) cTGGCGCAGGCGGTGTACGCATTGAAAATCAAACTGGCATTTTAACCGACTGGCGCGGCTAt  >  1:563006/1‑62 (MQ=255) cTGGCGCAGGCGGTGTACGCATTGAAAATCAAACTGGCATTTTAACCGACTGGCGCGGCTAt  >  1:634132/1‑62 (MQ=255) cTGGCGCAGGCGGTGTACGCATTGAAAATCAAACTGGCATTTTAACCGACTGGCGCGGCTAt  >  1:79290/1‑62 (MQ=255) cTGGCGCAGGCGGTGTACGCATTGAAAATCAAACTGGCATTTTAACCGACTGGCGCGGCTAt  >  1:797264/1‑62 (MQ=255) cTGGCGCAGGCGGTGTACGCATTGAAAATCAAACTGGCATTTTAACCGACTGGCGCGGCTAt  >  1:80295/1‑62 (MQ=255) cTGGCGCAGGCGGTGTACGCATTGAAAATCAAACTGGCATTTTAACCGACTGGCGCGGCTAt  >  1:830830/1‑62 (MQ=255) cTGGCGCAGGCGGTGTACGCATTGAAAATCAAACTGGCATTTTAACCGACTGGCGCGGCTAt  >  1:831759/1‑62 (MQ=255) cTGGCGCAGGCGGTGTACGCATTGAAAATCAAACTGGCATTTTAACCGACTGGCGCGGCTAt  >  1:2650390/1‑62 (MQ=255) cTGGCGCAGGCGGTGTACGCATTGAAAATCAAACTGGCATTTTAACCGACTGGCGCGGCTAt  >  1:118266/1‑62 (MQ=255) cTGGCGCAGGCGGTGTACGCATTGAAAATCAAACTGGCATTTTAACCGACTGGCGCGGCTAt  >  1:1305156/1‑62 (MQ=255) cTGGCGCAGGCGGTGTACGCATTGAAAATCAAACTGGCATTTTAACCGACTGGCGCGGCTAt  >  1:1444179/1‑62 (MQ=255) cTGGCGCAGGCGGTGTACGCATTGAAAATCAAACTGGCATTTTAACCGACTGGCGCGGCTAt  >  1:1542090/1‑62 (MQ=255) cTGGCGCAGGCGGTGTACGCATTGAAAATCAAACTGGCATTTTAACCGACTGGCGCGGCTAt  >  1:1576965/1‑62 (MQ=255) cTGGCGCAGGCGGTGTACGCATTGAAAATCAAACTGGCATTTTAACCGACTGGCGCGGCTAt  >  1:1703408/1‑62 (MQ=255) cTGGCGCAGGCGGTGTACGCATTGAAAATCAAACTGGCATTTTAACCGACTGGCGCGGCTAt  >  1:1735366/1‑62 (MQ=255) cTGGCGCAGGCGGTGTACGCATTGAAAATCAAACTGGCATTTTAACCGACTGGCGCGGCTAt  >  1:1835647/1‑62 (MQ=255) cTGGCGCAGGCGGTGTACGCATTGAAAATCAAACTGGCATTTTAACCGACTGGCGCGGCTAt  >  1:1984394/1‑62 (MQ=255) cTGGCGCAGGCGGTGTACGCATTGAAAATCAAACTGGCATTTTAACCGACTGGCGCGGCTAt  >  1:2042982/1‑62 (MQ=255) cTGGCGCAGGCGGTGTACGCATTGAAAATCAAACTGGCATTTTAACCGACTGGCGCGGCTAt  >  1:2134434/1‑62 (MQ=255) cTGGCGCAGGCGGTGTACGCATTGAAAATCAAACTGGCATTTTAACCGACTGGCGCGGCTAt  >  1:225912/1‑62 (MQ=255) cTGGCGCAGGCGGTGTACGCATTGAAAATCAAACTGGCATTTTAACCGACTGGCGCGGCTAt  >  1:2467496/1‑62 (MQ=255) cTGGCGCAGGCGGTGTACGCATTGAAAATCAAACTGGCATTTTAACCGACTGGCGCGGCTAt  >  1:2630199/1‑62 (MQ=255) cTGGCGCAGGCGGTGTACGCATTGAAAATCAAACTGGCATTTTAACCGACTGGCGCGGCTAt  >  1:2635443/1‑62 (MQ=255) cTGGCGCAGGCGGTGTACGCATTGAAAATCAAACTGGCATTTTAACCGACTGGCGCGGCTAt  >  1:1042318/1‑62 (MQ=255) cTGGCGCAGGCGGTGTACGCATTGAAAATAAAACTGGCATTTTAACCGACTGGCGCGGCTAt  >  1:442078/1‑62 (MQ=255)                                                              | CTGGCGCAGGCGGTGTACGCATTGAAAATCAAACTGGCATTTTAACCGACTGGCGCGGCTAT  >  minE/360897‑360958

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑