Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	446101	446123	23	52 [0]	[0] 7	kdpD	fused sensory histidine kinase in two‑component regulatory system with KdpE

GCTGCAATTTACCGTTGTCATCGGGCAACAACACCTGACTGCGGGCATGAAACGTGGAGGCAA  >  minE/446038‑446100                                                               | gCTGCAATTTACCGTTGTCATCGGGCAACAACACCT‑ACTGCGGGCATGAAACGTGGAGGCaa  <  1:498248/62‑1 (MQ=255)  cTGCAATTTACCGTTGTCATCGGGCAACAACACCTGACTGCGGGCATGAAACGTGGAGGCaa  <  1:3416705/62‑1 (MQ=255)  cTGCAATTTACCGTTGTCATCGGGCAACAACACCTGACTGCGGGCATGAAACGTGGAGGCaa  <  1:2429118/62‑1 (MQ=255)  cTGCAATTTACCGTTGTCATCGGGCAACAACACCTGACTGCGGGCATGAAACGTGGAGGCaa  <  1:2544529/62‑1 (MQ=255)  cTGCAATTTACCGTTGTCATCGGGCAACAACACCTGACTGCGGGCATGAAACGTGGAGGCaa  <  1:2686039/62‑1 (MQ=255)  cTGCAATTTACCGTTGTCATCGGGCAACAACACCTGACTGCGGGCATGAAACGTGGAGGCaa  <  1:2756130/62‑1 (MQ=255)  cTGCAATTTACCGTTGTCATCGGGCAACAACACCTGACTGCGGGCATGAAACGTGGAGGCaa  <  1:2852084/62‑1 (MQ=255)  cTGCAATTTACCGTTGTCATCGGGCAACAACACCTGACTGCGGGCATGAAACGTGGAGGCaa  <  1:3195594/62‑1 (MQ=255)  cTGCAATTTACCGTTGTCATCGGGCAACAACACCTGACTGCGGGCATGAAACGTGGAGGCaa  <  1:3257721/62‑1 (MQ=255)  cTGCAATTTACCGTTGTCATCGGGCAACAACACCTGACTGCGGGCATGAAACGTGGAGGCaa  <  1:3274264/62‑1 (MQ=255)  cTGCAATTTACCGTTGTCATCGGGCAACAACACCTGACTGCGGGCATGAAACGTGGAGGCaa  <  1:3312162/62‑1 (MQ=255)  cTGCAATTTACCGTTGTCATCGGGCAACAACACCTGACTGCGGGCATGAAACGTGGAGGCaa  <  1:3344897/62‑1 (MQ=255)  cTGCAATTTACCGTTGTCATCGGGCAACAACACCTGACTGCGGGCATGAAACGTGGAGGCaa  <  1:338638/62‑1 (MQ=255)  cTGCAATTTACCGTTGTCATCGGGCAACAACACCTGACTGCGGGCATGAAACGTGGAGGCaa  <  1:2453898/62‑1 (MQ=255)  cTGCAATTTACCGTTGTCATCGGGCAACAACACCTGACTGCGGGCATGAAACGTGGAGGCaa  <  1:3473136/62‑1 (MQ=255)  cTGCAATTTACCGTTGTCATCGGGCAACAACACCTGACTGCGGGCATGAAACGTGGAGGCaa  <  1:3639618/62‑1 (MQ=255)  cTGCAATTTACCGTTGTCATCGGGCAACAACACCTGACTGCGGGCATGAAACGTGGAGGCaa  <  1:399167/62‑1 (MQ=255)  cTGCAATTTACCGTTGTCATCGGGCAACAACACCTGACTGCGGGCATGAAACGTGGAGGCaa  <  1:434499/62‑1 (MQ=255)  cTGCAATTTACCGTTGTCATCGGGCAACAACACCTGACTGCGGGCATGAAACGTGGAGGCaa  <  1:480678/62‑1 (MQ=255)  cTGCAATTTACCGTTGTCATCGGGCAACAACACCTGACTGCGGGCATGAAACGTGGAGGCaa  <  1:540663/62‑1 (MQ=255)  cTGCAATTTACCGTTGTCATCGGGCAACAACACCTGACTGCGGGCATGAAACGTGGAGGCaa  <  1:654715/62‑1 (MQ=255)  cTGCAATTTACCGTTGTCATCGGGCAACAACACCTGACTGCGGGCATGAAACGTGGAGGCaa  <  1:664919/62‑1 (MQ=255)  cTGCAATTTACCGTTGTCATCGGGCAACAACACCTGACTGCGGGCATGAAACGTGGAGGCaa  <  1:916724/62‑1 (MQ=255)  cTGCAATTTACCGTTGTCATCGGGCAACAACACCTGACTGCGGGCATGAAACGTGGAGGCaa  <  1:946570/62‑1 (MQ=255)  cTGCAATTTACCGTTGTCATCGGGCAACAACACCTGACTGCGGGCATGAAACGTGGAGGCaa  <  1:1856292/62‑1 (MQ=255)  cTGCAATTTACCGTTGTCATCGGGCAACAACACCTGACTGCGGGCATGAAACGTGGAGGCaa  <  1:1057144/62‑1 (MQ=255)  cTGCAATTTACCGTTGTCATCGGGCAACAACACCTGACTGCGGGCATGAAACGTGGAGGCaa  <  1:108039/62‑1 (MQ=255)  cTGCAATTTACCGTTGTCATCGGGCAACAACACCTGACTGCGGGCATGAAACGTGGAGGCaa  <  1:1160582/62‑1 (MQ=255)  cTGCAATTTACCGTTGTCATCGGGCAACAACACCTGACTGCGGGCATGAAACGTGGAGGCaa  <  1:1246933/62‑1 (MQ=255)  cTGCAATTTACCGTTGTCATCGGGCAACAACACCTGACTGCGGGCATGAAACGTGGAGGCaa  <  1:1294389/62‑1 (MQ=255)  cTGCAATTTACCGTTGTCATCGGGCAACAACACCTGACTGCGGGCATGAAACGTGGAGGCaa  <  1:1332261/62‑1 (MQ=255)  cTGCAATTTACCGTTGTCATCGGGCAACAACACCTGACTGCGGGCATGAAACGTGGAGGCaa  <  1:1516082/62‑1 (MQ=255)  cTGCAATTTACCGTTGTCATCGGGCAACAACACCTGACTGCGGGCATGAAACGTGGAGGCaa  <  1:1634866/62‑1 (MQ=255)  cTGCAATTTACCGTTGTCATCGGGCAACAACACCTGACTGCGGGCATGAAACGTGGAGGCaa  <  1:1682587/62‑1 (MQ=255)  cTGCAATTTACCGTTGTCATCGGGCAACAACACCTGACTGCGGGCATGAAACGTGGAGGCaa  <  1:1719129/62‑1 (MQ=255)  cTGCAATTTACCGTTGTCATCGGGCAACAACACCTGACTGCGGGCATGAAACGTGGAGGCaa  <  1:1724042/62‑1 (MQ=255)  cTGCAATTTACCGTTGTCATCGGGCAACAACACCTGACTGCGGGCATGAAACGTGGAGGCaa  <  1:1765223/62‑1 (MQ=255)  cTGCAATTTACCGTTGTCATCGGGCAACAACACCTGACTGCGGGCATGAAACGTGGAGGCaa  <  1:1855559/62‑1 (MQ=255)  cTGCAATTTACCGTTGTCATCGGGCAACAACACCTGACTGCGGGCATGAAACGTGGAGGCaa  <  1:2409912/62‑1 (MQ=255)  cTGCAATTTACCGTTGTCATCGGGCAACAACACCTGACTGCGGGCATGAAACGTGGAGGCaa  <  1:197278/62‑1 (MQ=255)  cTGCAATTTACCGTTGTCATCGGGCAACAACACCTGACTGCGGGCATGAAACGTGGAGGCaa  <  1:2053375/62‑1 (MQ=255)  cTGCAATTTACCGTTGTCATCGGGCAACAACACCTGACTGCGGGCATGAAACGTGGAGGCaa  <  1:2072521/62‑1 (MQ=255)  cTGCAATTTACCGTTGTCATCGGGCAACAACACCTGACTGCGGGCATGAAACGTGGAGGCaa  <  1:2120452/62‑1 (MQ=255)  cTGCAATTTACCGTTGTCATCGGGCAACAACACCTGACTGCGGGCATGAAACGTGGAGGCaa  <  1:220982/62‑1 (MQ=255)  cTGCAATTTACCGTTGTCATCGGGCAACAACACCTGACTGCGGGCATGAAACGTGGAGGCaa  <  1:2262744/62‑1 (MQ=255)  cTGCAATTTACCGTTGTCATCGGGCAACAACACCTGACTGCGGGCATGAAACGTGGAGGCaa  <  1:2341484/62‑1 (MQ=255)  cTGCAATTTACCGTTGTCATCGGGCAACAACACCTGACTGCGGGCATGAAACGTGGAGGCaa  <  1:235733/62‑1 (MQ=255)   tGCAATTTACCGTTGTCATCGTGCAACAACACCTGACTGCGGGCATGAAACGTGGAGGCaa  <  1:3098060/61‑1 (MQ=255)   tGCAATTTACCGTTGTCATCGGGCAACAACACCTGACTGCGGGCATGAAACGTGGAGGCaa  <  1:1013115/61‑1 (MQ=255)               ttGTCATCGGGCAACAACACCTGACTGCGGGCATGAAACGTGGAGGCaa  <  1:1869886/49‑1 (MQ=255)                  tCATCGGGCAACAACACCTGACTGCGGGCATGAAACGTGGAGGCaa  <  1:327690/46‑1 (MQ=255)                       gggCAACAACACCTGACTGCGGGCATGAAACGTGGAGGCaa  <  1:3268511/41‑1 (MQ=255)                                                               | GCTGCAATTTACCGTTGTCATCGGGCAACAACACCTGACTGCGGGCATGAAACGTGGAGGCAA  >  minE/446038‑446100

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑