Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	540694	540714	21	36 [0]	[0] 2	rhtA	threonine and homoserine efflux system

GCCAGCACAACCCAGACGAAATCTACCGGGCGACGAGAAGAGAACAGCGCCACCGCCAGTGG  >  minE/540632‑540693                                                              | gCCAGCACAACCCAGACGAAATCTACCGGGCGACGAGAAGAGAACAGCGCCACCGCCAGTgg  <  1:1106502/62‑1 (MQ=255) gCCAGCACAACCCAGACGAAATCTACCGGGCGACGAGAAGAGAACAGCGCCACCGCCAGTgg  <  1:996146/62‑1 (MQ=255) gCCAGCACAACCCAGACGAAATCTACCGGGCGACGAGAAGAGAACAGCGCCACCGCCAGTgg  <  1:777962/62‑1 (MQ=255) gCCAGCACAACCCAGACGAAATCTACCGGGCGACGAGAAGAGAACAGCGCCACCGCCAGTgg  <  1:765342/62‑1 (MQ=255) gCCAGCACAACCCAGACGAAATCTACCGGGCGACGAGAAGAGAACAGCGCCACCGCCAGTgg  <  1:685275/62‑1 (MQ=255) gCCAGCACAACCCAGACGAAATCTACCGGGCGACGAGAAGAGAACAGCGCCACCGCCAGTgg  <  1:491773/62‑1 (MQ=255) gCCAGCACAACCCAGACGAAATCTACCGGGCGACGAGAAGAGAACAGCGCCACCGCCAGTgg  <  1:471567/62‑1 (MQ=255) gCCAGCACAACCCAGACGAAATCTACCGGGCGACGAGAAGAGAACAGCGCCACCGCCAGTgg  <  1:3460730/62‑1 (MQ=255) gCCAGCACAACCCAGACGAAATCTACCGGGCGACGAGAAGAGAACAGCGCCACCGCCAGTgg  <  1:3038502/62‑1 (MQ=255) gCCAGCACAACCCAGACGAAATCTACCGGGCGACGAGAAGAGAACAGCGCCACCGCCAGTgg  <  1:2979891/62‑1 (MQ=255) gCCAGCACAACCCAGACGAAATCTACCGGGCGACGAGAAGAGAACAGCGCCACCGCCAGTgg  <  1:2809792/62‑1 (MQ=255) gCCAGCACAACCCAGACGAAATCTACCGGGCGACGAGAAGAGAACAGCGCCACCGCCAGTgg  <  1:2640760/62‑1 (MQ=255) gCCAGCACAACCCAGACGAAATCTACCGGGCGACGAGAAGAGAACAGCGCCACCGCCAGTgg  <  1:2171534/62‑1 (MQ=255) gCCAGCACAACCCAGACGAAATCTACCGGGCGACGAGAAGAGAACAGCGCCACCGCCAGTgg  <  1:1119583/62‑1 (MQ=255) gCCAGCACAACCCAGACGAAATCTACCGGGCGACGAGAAGAGAACAGCGCCACCGCCAGTgg  <  1:1706429/62‑1 (MQ=255) gCCAGCACAACCCAGACGAAATCTACCGGGCGACGAGAAGAGAACAGCGCCACCGCCAGTgg  <  1:1203744/62‑1 (MQ=255) gCCAGCACAACCCAGACGAAATCTACCGGGCGACGAGAAGAGAACAGCGCCACCGCCAGTgg  <  1:1705190/62‑1 (MQ=255) gCCAGCACAACCCAGACGAAATCTACCGGGCGACGAGAAGAGAACAGCGCCACCGCCAGTgg  <  1:1678793/62‑1 (MQ=255) gCCAGCACAACCCAGACGAAATCTACCGGGCGACGAGAAGAGAACAGCGCCACCGCCAGTgg  <  1:1600051/62‑1 (MQ=255) gCCAGCACAACCCAGACGAAATCTACCGGGCGACGAGAAGAGAACAGCGCCACCGCCAGTgg  <  1:1287799/62‑1 (MQ=255) gCCAGCACAACCCAGACGAAATCTACCGGGCGACGAGAAGAGAACAGCGCCACCGCCAGTgg  <  1:1773851/62‑1 (MQ=255) gCCAGCACAACCCAGACGAAATCTACCGGGCGACGAGAAGAGAACAGCGCCACCGCCAGTgg  <  1:1520087/62‑1 (MQ=255)  ccAGCACAACCCAGACGAAATCTACCGGGCGACGAGAAGAGAACAGCGCCACCGCCAGTgg  <  1:312762/61‑1 (MQ=255)  ccAGCACAACCCAGACGAAATCTACCGGGCGACGAGAAGAGAACAGCGCCACCGCCAGTgg  <  1:1009231/61‑1 (MQ=255)  ccAGCACAACCCAGACGAAATCTACCGGGCGACGAGAAGAGAACAGCGCCACCGCCAGTgg  <  1:1188973/61‑1 (MQ=255)  ccAGCACAACCCAGACGAAATCTACCGGGCGACGAGAAGAGAACAGCGCCACCGCCAGTgg  <  1:516364/61‑1 (MQ=255)  ccAGCACAACCCAGACGAAATCTACCGGGCGACGAGAAGAGAACAGCGCCACCGCCAGTgg  <  1:3517428/61‑1 (MQ=255)  ccAGCACAACCCAGACGAAATCTACCGGGCGACGAGAAGAGAACAGCGCCACCGCCAGTgg  <  1:3189414/61‑1 (MQ=255)  ccAGCACAACCCAGACGAAATCTACCGGGCGACGAGAAGAGAACAGCGCCACCGCCAGTgg  <  1:3140803/61‑1 (MQ=255)  ccAGCACAACCCAGACGAAATCTACCGGGCGACGAGAAGAGAACAGCGCCACCGCCAGTgg  <  1:3055628/61‑1 (MQ=255)  ccAGCACAACCCAGACGAAATCTACCGGGCGACGAGAAGAGAACAGCGCCACCGCCAGTgg  <  1:1697878/61‑1 (MQ=255)  ccAGCACAACCCAGACGAAATCTACCGGGCGACGAGAAGAGAACAGCGCCACCGCCAGTgg  <  1:2477469/61‑1 (MQ=255)  ccAGCACAACCCAGACGAAATCTACCGGGCGACGAGAAGAGAACAGCGCCACCGCCAGTgg  <  1:2261432/61‑1 (MQ=255)  ccAGCACAACCCAGACGAAATCTACCGGGCGACGAGAAGAGAACAGCGCCACCGCCAGTgg  <  1:2012837/61‑1 (MQ=255)  ccAGCACAACCCAGACGAAATCTACCGGGCGACGAGAAGAGAACAGCGCCACCGCCAGTgg  <  1:1781721/61‑1 (MQ=255)                 cGAAATCTACCGGGCGACGAGAAGAGAACAGCGCCACCGCCAGTgg  <  1:1334754/46‑1 (MQ=255)                                                              | GCCAGCACAACCCAGACGAAATCTACCGGGCGACGAGAAGAGAACAGCGCCACCGCCAGTGG  >  minE/540632‑540693

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑