Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	35233	35236	4	61 [0]	[0] 24	caiC	predicted crotonobetaine CoA ligase:carnitine CoA ligase

CACGCCTGGCTATTTTGCAGGATCCACGCGCTTTCCTCGCACAACAGGCGGGCGTTAATCGG  >  minE/35171‑35232                                                              | cACGCCTGGCTATTTTGCAGGATCGACGCGCTTTCCTCGCACAACAGGCGGGCGTTAATCgg  >  1:441256/1‑62 (MQ=255) cACGCCTGGCTATTTTGCAGGATCCACGCGCTTTCCTCGCACAACAGGCGGGCGTTAATCgg  >  1:342682/1‑62 (MQ=255) cACGCCTGGCTATTTTGCAGGATCCACGCGCTTTCCTCGCACAACAGGCGGGCGTTAATCgg  >  1:2739884/1‑62 (MQ=255) cACGCCTGGCTATTTTGCAGGATCCACGCGCTTTCCTCGCACAACAGGCGGGCGTTAATCgg  >  1:2743243/1‑62 (MQ=255) cACGCCTGGCTATTTTGCAGGATCCACGCGCTTTCCTCGCACAACAGGCGGGCGTTAATCgg  >  1:2798762/1‑62 (MQ=255) cACGCCTGGCTATTTTGCAGGATCCACGCGCTTTCCTCGCACAACAGGCGGGCGTTAATCgg  >  1:2801658/1‑62 (MQ=255) cACGCCTGGCTATTTTGCAGGATCCACGCGCTTTCCTCGCACAACAGGCGGGCGTTAATCgg  >  1:2883659/1‑62 (MQ=255) cACGCCTGGCTATTTTGCAGGATCCACGCGCTTTCCTCGCACAACAGGCGGGCGTTAATCgg  >  1:2903552/1‑62 (MQ=255) cACGCCTGGCTATTTTGCAGGATCCACGCGCTTTCCTCGCACAACAGGCGGGCGTTAATCgg  >  1:2970062/1‑62 (MQ=255) cACGCCTGGCTATTTTGCAGGATCCACGCGCTTTCCTCGCACAACAGGCGGGCGTTAATCgg  >  1:2983836/1‑62 (MQ=255) cACGCCTGGCTATTTTGCAGGATCCACGCGCTTTCCTCGCACAACAGGCGGGCGTTAATCgg  >  1:2995192/1‑62 (MQ=255) cACGCCTGGCTATTTTGCAGGATCCACGCGCTTTCCTCGCACAACAGGCGGGCGTTAATCgg  >  1:3047713/1‑62 (MQ=255) cACGCCTGGCTATTTTGCAGGATCCACGCGCTTTCCTCGCACAACAGGCGGGCGTTAATCgg  >  1:3104115/1‑62 (MQ=255) cACGCCTGGCTATTTTGCAGGATCCACGCGCTTTCCTCGCACAACAGGCGGGCGTTAATCgg  >  1:3166225/1‑62 (MQ=255) cACGCCTGGCTATTTTGCAGGATCCACGCGCTTTCCTCGCACAACAGGCGGGCGTTAATCgg  >  1:3171354/1‑62 (MQ=255) cACGCCTGGCTATTTTGCAGGATCCACGCGCTTTCCTCGCACAACAGGCGGGCGTTAATCgg  >  1:3225567/1‑62 (MQ=255) cACGCCTGGCTATTTTGCAGGATCCACGCGCTTTCCTCGCACAACAGGCGGGCGTTAATCgg  >  1:3259385/1‑62 (MQ=255) cACGCCTGGCTATTTTGCAGGATCCACGCGCTTTCCTCGCACAACAGGCGGGCGTTAATCgg  >  1:2648437/1‑62 (MQ=255) cACGCCTGGCTATTTTGCAGGATCCACGCGCTTTCCTCGCACAACAGGCGGGCGTTAATCgg  >  1:3601841/1‑62 (MQ=255) cACGCCTGGCTATTTTGCAGGATCCACGCGCTTTCCTCGCACAACAGGCGGGCGTTAATCgg  >  1:378999/1‑62 (MQ=255) cACGCCTGGCTATTTTGCAGGATCCACGCGCTTTCCTCGCACAACAGGCGGGCGTTAATCgg  >  1:432024/1‑62 (MQ=255) cACGCCTGGCTATTTTGCAGGATCCACGCGCTTTCCTCGCACAACAGGCGGGCGTTAATCgg  >  1:469615/1‑62 (MQ=255) cACGCCTGGCTATTTTGCAGGATCCACGCGCTTTCCTCGCACAACAGGCGGGCGTTAATCgg  >  1:55917/1‑62 (MQ=255) cACGCCTGGCTATTTTGCAGGATCCACGCGCTTTCCTCGCACAACAGGCGGGCGTTAATCgg  >  1:574853/1‑62 (MQ=255) cACGCCTGGCTATTTTGCAGGATCCACGCGCTTTCCTCGCACAACAGGCGGGCGTTAATCgg  >  1:598973/1‑62 (MQ=255) cACGCCTGGCTATTTTGCAGGATCCACGCGCTTTCCTCGCACAACAGGCGGGCGTTAATCgg  >  1:704370/1‑62 (MQ=255) cACGCCTGGCTATTTTGCAGGATCCACGCGCTTTCCTCGCACAACAGGCGGGCGTTAATCgg  >  1:737134/1‑62 (MQ=255) cACGCCTGGCTATTTTGCAGGATCCACGCGCTTTCCTCGCACAACAGGCGGGCGTTAATCgg  >  1:790592/1‑62 (MQ=255) cACGCCTGGCTATTTTGCAGGATCCACGCGCTTTCCTCGCACAACAGGCGGGCGTTAATCgg  >  1:79558/1‑62 (MQ=255) cACGCCTGGCTATTTTGCAGGATCCACGCGCTTTCCTCGCACAACAGGCGGGCGTTAATCgg  >  1:891966/1‑62 (MQ=255) cACGCCTGGCTATTTTGCAGGATCCACGCGCTTTCCTCGCACAACAGGCGGGCGTTAATCgg  >  1:935842/1‑62 (MQ=255) cACGCCTGGCTATTTTGCAGGATCCACGCGCTTTCCTCGCACAACAGGCGGGCGTTAATCgg  >  1:1973573/1‑62 (MQ=255) cACGCCTGGCTATTTTGCAGGATCCACGCGCTTTCCTCGCACAACAGGCGGGCGTTAATCgg  >  1:1111590/1‑62 (MQ=255) cACGCCTGGCTATTTTGCAGGATCCACGCGCTTTCCTCGCACAACAGGCGGGCGTTAATCgg  >  1:1320568/1‑62 (MQ=255) cACGCCTGGCTATTTTGCAGGATCCACGCGCTTTCCTCGCACAACAGGCGGGCGTTAATCgg  >  1:1409183/1‑62 (MQ=255) cACGCCTGGCTATTTTGCAGGATCCACGCGCTTTCCTCGCACAACAGGCGGGCGTTAATCgg  >  1:1474961/1‑62 (MQ=255) cACGCCTGGCTATTTTGCAGGATCCACGCGCTTTCCTCGCACAACAGGCGGGCGTTAATCgg  >  1:1490307/1‑62 (MQ=255) cACGCCTGGCTATTTTGCAGGATCCACGCGCTTTCCTCGCACAACAGGCGGGCGTTAATCgg  >  1:1592114/1‑62 (MQ=255) cACGCCTGGCTATTTTGCAGGATCCACGCGCTTTCCTCGCACAACAGGCGGGCGTTAATCgg  >  1:1603977/1‑62 (MQ=255) cACGCCTGGCTATTTTGCAGGATCCACGCGCTTTCCTCGCACAACAGGCGGGCGTTAATCgg  >  1:1686936/1‑62 (MQ=255) cACGCCTGGCTATTTTGCAGGATCCACGCGCTTTCCTCGCACAACAGGCGGGCGTTAATCgg  >  1:187335/1‑62 (MQ=255) cACGCCTGGCTATTTTGCAGGATCCACGCGCTTTCCTCGCACAACAGGCGGGCGTTAATCgg  >  1:1887548/1‑62 (MQ=255) cACGCCTGGCTATTTTGCAGGATCCACGCGCTTTCCTCGCACAACAGGCGGGCGTTAATCgg  >  1:1888287/1‑62 (MQ=255) cACGCCTGGCTATTTTGCAGGATCCACGCGCTTTCCTCGCACAACAGGCGGGCGTTAATCgg  >  1:1895349/1‑62 (MQ=255) cACGCCTGGCTATTTTGCAGGATCCACGCGCTTTCCTCGCACAACAGGCGGGCGTTAATCgg  >  1:1901282/1‑62 (MQ=255) cACGCCTGGCTATTTTGCAGGATCCACGCGCTTTCCTCGCACAACAGGCGGGCGTTAATCgg  >  1:1932751/1‑62 (MQ=255) cACGCCTGGCTATTTTGCAGGATCCACGCGCTTTCCTCGCACAACAGGCGGGCGTTAATCgg  >  1:1016008/1‑62 (MQ=255) cACGCCTGGCTATTTTGCAGGATCCACGCGCTTTCCTCGCACAACAGGCGGGCGTTAATCgg  >  1:2031541/1‑62 (MQ=255) cACGCCTGGCTATTTTGCAGGATCCACGCGCTTTCCTCGCACAACAGGCGGGCGTTAATCgg  >  1:2079490/1‑62 (MQ=255) cACGCCTGGCTATTTTGCAGGATCCACGCGCTTTCCTCGCACAACAGGCGGGCGTTAATCgg  >  1:2118069/1‑62 (MQ=255) cACGCCTGGCTATTTTGCAGGATCCACGCGCTTTCCTCGCACAACAGGCGGGCGTTAATCgg  >  1:2132377/1‑62 (MQ=255) cACGCCTGGCTATTTTGCAGGATCCACGCGCTTTCCTCGCACAACAGGCGGGCGTTAATCgg  >  1:2165436/1‑62 (MQ=255) cACGCCTGGCTATTTTGCAGGATCCACGCGCTTTCCTCGCACAACAGGCGGGCGTTAATCgg  >  1:2188225/1‑62 (MQ=255) cACGCCTGGCTATTTTGCAGGATCCACGCGCTTTCCTCGCACAACAGGCGGGCGTTAATCgg  >  1:2224026/1‑62 (MQ=255) cACGCCTGGCTATTTTGCAGGATCCACGCGCTTTCCTCGCACAACAGGCGGGCGTTAATCgg  >  1:2275387/1‑62 (MQ=255) cACGCCTGGCTATTTTGCAGGATCCACGCGCTTTCCTCGCACAACAGGCGGGCGTTAATCgg  >  1:2285145/1‑62 (MQ=255) cACGCCTGGCTATTTTGCAGGATCCACGCGCTTTCCTCGCACAACAGGCGGGCGTTAATCgg  >  1:2308314/1‑62 (MQ=255) cACGCCTGGCTATTTTGCAGGATCCACGCGCTTTCCTCGCACAACAGGCGGGCGTTAATCgg  >  1:2356409/1‑62 (MQ=255) cACGCCTGGCTATTTTGCAGGATCCACGCGCTTTCCTCGCACAACAGGCGGGCGTTAATCgg  >  1:2444302/1‑62 (MQ=255) cACGCCTGGCTATTTTGCAGGATCCACGCGCTTTCCTCGCACAACAGGCGGGCGTTAATCgg  >  1:2557583/1‑62 (MQ=255) cACGCCTGGCTATTTTGCAGGATCCACGCGCTTTCCTCGCACAACAGGCGGGCGTTAATCgg  >  1:2565084/1‑62 (MQ=255)                                                              | CACGCCTGGCTATTTTGCAGGATCCACGCGCTTTCCTCGCACAACAGGCGGGCGTTAATCGG  >  minE/35171‑35232

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑