Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	682936	682954	19	54 [0]	[0] 23	helD	DNA helicase IV

ACCATCACATGAGGCCTGCCAGCCTGGAAAAAGCGGCAACACGCTGGCCGAAGTTGCAAAT  >  minE/682875‑682935                                                             | tctaTCACATGAGGCCTGCCAGCCTGGAAAAAGCGGCAACACGCTGGCCGAAGTTGCAAAt  <  1:2263459/58‑1 (MQ=255)       acaTTAGGCCTGCCAGCCTGGAAAAAGCGGCAACACGCTGGCCGAAGTTGCAAAt  <  1:1220593/55‑1 (MQ=255)       acaTGAGGCCTGCCAGCCTTGAAAAAGCGGCAACACGCTGGCCGAAGTTGCAAAt  <  1:3489923/55‑1 (MQ=255)       acaTGAGGCCTGCCAGCCTGTAAAAAGCGGCAACACGCTGGCCGAAGTTGCAAAt  <  1:370989/55‑1 (MQ=255)       acaTGAGGCCTGCCAGCCTGGAAAAAGCGGCAACACGCTGGCCGAAGTTGCAAAt  <  1:558497/55‑1 (MQ=255)       acaTGAGGCCTGCCAGCCTGGAAAAAGCGGCAACACGCTGGCCGAAGTTGCAAAt  <  1:3074198/55‑1 (MQ=255)       acaTGAGGCCTGCCAGCCTGGAAAAAGCGGCAACACGCTGGCCGAAGTTGCAAAt  <  1:3325194/55‑1 (MQ=255)       acaTGAGGCCTGCCAGCCTGGAAAAAGCGGCAACACGCTGGCCGAAGTTGCAAAt  <  1:3406357/55‑1 (MQ=255)       acaTGAGGCCTGCCAGCCTGGAAAAAGCGGCAACACGCTGGCCGAAGTTGCAAAt  <  1:3442231/55‑1 (MQ=255)       acaTGAGGCCTGCCAGCCTGGAAAAAGCGGCAACACGCTGGCCGAAGTTGCAAAt  <  1:351476/55‑1 (MQ=255)       acaTGAGGCCTGCCAGCCTGGAAAAAGCGGCAACACGCTGGCCGAAGTTGCAAAt  <  1:3591884/55‑1 (MQ=255)       acaTGAGGCCTGCCAGCCTGGAAAAAGCGGCAACACGCTGGCCGAAGTTGCAAAt  <  1:3597560/55‑1 (MQ=255)       acaTGAGGCCTGCCAGCCTGGAAAAAGCGGCAACACGCTGGCCGAAGTTGCAAAt  <  1:3608310/55‑1 (MQ=255)       acaTGAGGCCTGCCAGCCTGGAAAAAGCGGCAACACGCTGGCCGAAGTTGCAAAt  <  1:384990/55‑1 (MQ=255)       acaTGAGGCCTGCCAGCCTGGAAAAAGCGGCAACACGCTGGCCGAAGTTGCAAAt  <  1:389351/55‑1 (MQ=255)       acaTGAGGCCTGCCAGCCTGGAAAAAGCGGCAACACGCTGGCCGAAGTTGCAAAt  <  1:2999019/55‑1 (MQ=255)       acaTGAGGCCTGCCAGCCTGGAAAAAGCGGCAACACGCTGGCCGAAGTTGCAAAt  <  1:598149/55‑1 (MQ=255)       acaTGAGGCCTGCCAGCCTGGAAAAAGCGGCAACACGCTGGCCGAAGTTGCAAAt  <  1:629/55‑1 (MQ=255)       acaTGAGGCCTGCCAGCCTGGAAAAAGCGGCAACACGCTGGCCGAAGTTGCAAAt  <  1:652329/55‑1 (MQ=255)       acaTGAGGCCTGCCAGCCTGGAAAAAGCGGCAACACGCTGGCCGAAGTTGCAAAt  <  1:747276/55‑1 (MQ=255)       acaTGAGGCCTGCCAGCCTGGAAAAAGCGGCAACACGCTGGCCGAAGTTGCAAAt  <  1:750930/55‑1 (MQ=255)       acaTGAGGCCTGCCAGCCTGGAAAAAGCGGCAACACGCTGGCCGAAGTTGCAAAt  <  1:781420/55‑1 (MQ=255)       acaTGAGGCCTGCCAGCCTGGAAAAAGCGGCAACACGCTGGCCGAAGTTGCAAAt  <  1:786189/55‑1 (MQ=255)       acaTGAGGCCTGCCAGCCTGGAAAAAGCGGCAACACGCTGGCCGAAGTTGCAAAt  <  1:865688/55‑1 (MQ=255)       acaTGAGGCCTGCCAGCCTGGAAAAAGCGGCAACACGCTGGCCGAAGTTGCAAAt  <  1:888096/55‑1 (MQ=255)       acaTGAGGCCTGCCAGCCTGGAAAAAGCGGCAACACGCTGGCCGAAGTTGCAAAt  <  1:930817/55‑1 (MQ=255)       acaTGAGGCCTGCCAGCCTGGAAAAAGCGGCAACACGCTGGCCGAAGTTGCAAAt  <  1:964917/55‑1 (MQ=255)       acaTGAGGCCTGCCAGCCTGGAAAAAGCGGCAACACGCTGGCCGAAGTTGCAAAt  <  1:203635/55‑1 (MQ=255)       acaTGAGGCCTGCCAGCCTGGAAAAAGCGGCAACACGCTGGCCGAAGTTGCAAAt  <  1:1034993/55‑1 (MQ=255)       acaTGAGGCCTGCCAGCCTGGAAAAAGCGGCAACACGCTGGCCGAAGTTGCAAAt  <  1:1088284/55‑1 (MQ=255)       acaTGAGGCCTGCCAGCCTGGAAAAAGCGGCAACACGCTGGCCGAAGTTGCAAAt  <  1:122241/55‑1 (MQ=255)       acaTGAGGCCTGCCAGCCTGGAAAAAGCGGCAACACGCTGGCCGAAGTTGCAAAt  <  1:1273567/55‑1 (MQ=255)       acaTGAGGCCTGCCAGCCTGGAAAAAGCGGCAACACGCTGGCCGAAGTTGCAAAt  <  1:146865/55‑1 (MQ=255)       acaTGAGGCCTGCCAGCCTGGAAAAAGCGGCAACACGCTGGCCGAAGTTGCAAAt  <  1:1528735/55‑1 (MQ=255)       acaTGAGGCCTGCCAGCCTGGAAAAAGCGGCAACACGCTGGCCGAAGTTGCAAAt  <  1:1699588/55‑1 (MQ=255)       acaTGAGGCCTGCCAGCCTGGAAAAAGCGGCAACACGCTGGCCGAAGTTGCAAAt  <  1:1716788/55‑1 (MQ=255)       acaTGAGGCCTGCCAGCCTGGAAAAAGCGGCAACACGCTGGCCGAAGTTGCAAAt  <  1:1943884/55‑1 (MQ=255)       acaTGAGGCCTGCCAGCCTGGAAAAAGCGGCAACACGCTGGCCGAAGTTGCAAAt  <  1:1949904/55‑1 (MQ=255)       acaTGAGGCCTGCCAGCCTGGAAAAAGCGGCAACACGCTGGCCGAAGTTGCAAAt  <  1:1997140/55‑1 (MQ=255)       acaTGAGGCCTGCCAGCCTGGAAAAAGCGGCAACACGCTGGCCGAAGTTGCAAAt  <  1:102168/55‑1 (MQ=255)       acaTGAGGCCTGCCAGCCTGGAAAAAGCGGCAACACGCTGGCCGAAGTTGCAAAt  <  1:2077246/55‑1 (MQ=255)       acaTGAGGCCTGCCAGCCTGGAAAAAGCGGCAACACGCTGGCCGAAGTTGCAAAt  <  1:2327624/55‑1 (MQ=255)       acaTGAGGCCTGCCAGCCTGGAAAAAGCGGCAACACGCTGGCCGAAGTTGCAAAt  <  1:2528148/55‑1 (MQ=255)       acaTGAGGCCTGCCAGCCTGGAAAAAGCGGCAACACGCTGGCCGAAGTTGCAAAt  <  1:2674785/55‑1 (MQ=255)       acaTGAGGCCTGCCAGCCTGGAAAAAGCGGCAACACGCTGGCCGAAGTTGCAAAt  <  1:2804272/55‑1 (MQ=255)       acaTGAGGCCTGCCAGCCTGGAAAAAGCGGCAACACGCTGGCCGAAGTTGCAAAt  <  1:2909270/55‑1 (MQ=255)       acaTGAGGCCTGCCAGCCTGGAAAAAGCGGCAACACGCTGGCCGAAGTTGCAAAt  <  1:2980158/55‑1 (MQ=255)       acaTGAGGCCTGCCAGCCTGGAAAAAGCGGCAACACGCTGGCCGAAGTTGCAAAt  <  1:2983968/55‑1 (MQ=255)       acaTGAGGCCTCCCAGCCTGGAAAAAGCGGCAACACGCTGGCCGAAGTTGCAAAt  <  1:2561810/55‑1 (MQ=255)        caTGAGGCCTGCCAGCCTGGAAAAAGCGGCAACTCGCTGGCCGAAGTTGCatat  <  1:313829/54‑1 (MQ=255)        caTGAGGCCTGCCAGCCTGGAAAAAGCGGCAACACGCTGGCCGAAGTTGCAAAt  <  1:2329647/54‑1 (MQ=255)        caTGAGGCCTGCCAGCCTGGAAAAAGCGGCAACACGCTGGCCGAAGTTGCAAAt  <  1:1821770/54‑1 (MQ=255)        caTGAGGCCTGCCAGCCTGGAAAAAGCGGCAACACGCTGGCCGAAGTTGCAAAt  <  1:2882903/54‑1 (MQ=255)          tGAGGCCTGCCAGCCTGGAAAAAGCGGCAACACGCTGGCCGAAGTTGCAAAt  <  1:706876/52‑1 (MQ=255)                                                             | ACCATCACATGAGGCCTGCCAGCCTGGAAAAAGCGGCAACACGCTGGCCGAAGTTGCAAAT  >  minE/682875‑682935

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑