Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ minE 693495 693507 13 70 [0] [0] 15 hyaF protein involved in nickel incorporation into hydrogenase‑1 proteins

CAGCAGGAGCGTGCCTCATGAGCGAAACTTTTTTCCATCTGCTGGGGCCAGGAACGCAACCGAA  >  minE/693431‑693494
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cagcagGAGCGTGCCTCATGAGCGAAACTTTTTTCCATCTGCT‑‑GGCCAGGAACGCAACCGaa  <  1:399394/62‑1 (MQ=255)
  gcagGAGCGTGCCTCATGAGCGAAACTTTTTTCGATCTGCTGGGGCCAGGAACGCAACCGaa  <  1:959307/62‑1 (MQ=255)
  gcagGAGCGTGCCTCATGAGCGAAACTTTTTTCCATTTGCTGGGGCCAGGAACGCAACCGaa  <  1:2969423/62‑1 (MQ=255)
  gcagGAGCGTGCCTCATGAGCGAAACTTTTTTCCATCTGCTGGGGCCAGGAACGCAACCGaa  <  1:3140672/62‑1 (MQ=255)
  gcagGAGCGTGCCTCATGAGCGAAACTTTTTTCCATCTGCTGGGGCCAGGAACGCAACCGaa  <  1:2534676/62‑1 (MQ=255)
  gcagGAGCGTGCCTCATGAGCGAAACTTTTTTCCATCTGCTGGGGCCAGGAACGCAACCGaa  <  1:304933/62‑1 (MQ=255)
  gcagGAGCGTGCCTCATGAGCGAAACTTTTTTCCATCTGCTGGGGCCAGGAACGCAACCGaa  <  1:2984933/62‑1 (MQ=255)
  gcagGAGCGTGCCTCATGAGCGAAACTTTTTTCCATCTGCTGGGGCCAGGAACGCAACCGaa  <  1:2966603/62‑1 (MQ=255)
  gcagGAGCGTGCCTCATGAGCGAAACTTTTTTCCATCTGCTGGGGCCAGGAACGCAACCGaa  <  1:2863907/62‑1 (MQ=255)
  gcagGAGCGTGCCTCATGAGCGAAACTTTTTTCCATCTGCTGGGGCCAGGAACGCAACCGaa  <  1:2821966/62‑1 (MQ=255)
  gcagGAGCGTGCCTCATGAGCGAAACTTTTTTCCATCTGCTGGGGCCAGGAACGCAACCGaa  <  1:2807428/62‑1 (MQ=255)
  gcagGAGCGTGCCTCATGAGCGAAACTTTTTTCCATCTGCTGGGGCCAGGAACGCAACCGaa  <  1:2781563/62‑1 (MQ=255)
  gcagGAGCGTGCCTCATGAGCGAAACTTTTTTCCATCTGCTGGGGCCAGGAACGCAACCGaa  <  1:2706336/62‑1 (MQ=255)
  gcagGAGCGTGCCTCATGAGCGAAACTTTTTTCCATCTGCTGGGGCCAGGAACGCAACCGaa  <  1:2690009/62‑1 (MQ=255)
  gcagGAGCGTGCCTCATGAGCGAAACTTTTTTCCATCTGCTGGGGCCAGGAACGCAACCGaa  <  1:2677084/62‑1 (MQ=255)
  gcagGAGCGTGCCTCATGAGCGAAACTTTTTTCCATCTGCTGGGGCCAGGAACGCAACCGaa  <  1:2603684/62‑1 (MQ=255)
  gcagGAGCGTGCCTCATGAGCGAAACTTTTTTCCATCTGCTGGGGCCAGGAACGCAACCGaa  <  1:2570174/62‑1 (MQ=255)
  gcagGAGCGTGCCTCATGAGCGAAACTTTTTTCCATCTGCTGGGGCCAGGAACGCAACCGaa  <  1:2545276/62‑1 (MQ=255)
  gcagGAGCGTGCCTCATGAGCGAAACTTTTTTCCATCTGCTGGGGCCAGGAACGCAACCGaa  <  1:316592/62‑1 (MQ=255)
  gcagGAGCGTGCCTCATGAGCGAAACTTTTTTCCATCTGCTGGGGCCAGGAACGCAACCGaa  <  1:3180103/62‑1 (MQ=255)
  gcagGAGCGTGCCTCATGAGCGAAACTTTTTTCCATCTGCTGGGGCCAGGAACGCAACCGaa  <  1:3353697/62‑1 (MQ=255)
  gcagGAGCGTGCCTCATGAGCGAAACTTTTTTCCATCTGCTGGGGCCAGGAACGCAACCGaa  <  1:3398329/62‑1 (MQ=255)
  gcagGAGCGTGCCTCATGAGCGAAACTTTTTTCCATCTGCTGGGGCCAGGAACGCAACCGaa  <  1:347433/62‑1 (MQ=255)
  gcagGAGCGTGCCTCATGAGCGAAACTTTTTTCCATCTGCTGGGGCCAGGAACGCAACCGaa  <  1:3529737/62‑1 (MQ=255)
  gcagGAGCGTGCCTCATGAGCGAAACTTTTTTCCATCTGCTGGGGCCAGGAACGCAACCGaa  <  1:423858/62‑1 (MQ=255)
  gcagGAGCGTGCCTCATGAGCGAAACTTTTTTCCATCTGCTGGGGCCAGGAACGCAACCGaa  <  1:542613/62‑1 (MQ=255)
  gcagGAGCGTGCCTCATGAGCGAAACTTTTTTCCATCTGCTGGGGCCAGGAACGCAACCGaa  <  1:578102/62‑1 (MQ=255)
  gcagGAGCGTGCCTCATGAGCGAAACTTTTTTCCATCTGCTGGGGCCAGGAACGCAACCGaa  <  1:626109/62‑1 (MQ=255)
  gcagGAGCGTGCCTCATGAGCGAAACTTTTTTCCATCTGCTGGGGCCAGGAACGCAACCGaa  <  1:70397/62‑1 (MQ=255)
  gcagGAGCGTGCCTCATGAGCGAAACTTTTTTCCATCTGCTGGGGCCAGGAACGCAACCGaa  <  1:711973/62‑1 (MQ=255)
  gcagGAGCGTGCCTCATGAGCGAAACTTTTTTCCATCTGCTGGGGCCAGGAACGCAACCGaa  <  1:712692/62‑1 (MQ=255)
  gcagGAGCGTGCCTCATGAGCGAAACTTTTTTCCATCTGCTGGGGCCAGGAACGCAACCGaa  <  1:770839/62‑1 (MQ=255)
  gcagGAGCGTGCCTCATGAGCGAAACTTTTTTCCATCTGCTGGGGCCAGGAACGCAACCGaa  <  1:827807/62‑1 (MQ=255)
  gcagGAGCGTGCCTCATGAGCGAAACTTTTTTCCATCTGCTGGGGCCAGGAACGCAACCGaa  <  1:1851021/62‑1 (MQ=255)
  gcagGAGCGTGCCTCATGAGCGAAACTTTTTTCCATCTGCTGGGGCCAGGAACGCAACCGaa  <  1:1084954/62‑1 (MQ=255)
  gcagGAGCGTGCCTCATGAGCGAAACTTTTTTCCATCTGCTGGGGCCAGGAACGCAACCGaa  <  1:1099332/62‑1 (MQ=255)
  gcagGAGCGTGCCTCATGAGCGAAACTTTTTTCCATCTGCTGGGGCCAGGAACGCAACCGaa  <  1:1246619/62‑1 (MQ=255)
  gcagGAGCGTGCCTCATGAGCGAAACTTTTTTCCATCTGCTGGGGCCAGGAACGCAACCGaa  <  1:1277622/62‑1 (MQ=255)
  gcagGAGCGTGCCTCATGAGCGAAACTTTTTTCCATCTGCTGGGGCCAGGAACGCAACCGaa  <  1:135/62‑1 (MQ=255)
  gcagGAGCGTGCCTCATGAGCGAAACTTTTTTCCATCTGCTGGGGCCAGGAACGCAACCGaa  <  1:1456253/62‑1 (MQ=255)
  gcagGAGCGTGCCTCATGAGCGAAACTTTTTTCCATCTGCTGGGGCCAGGAACGCAACCGaa  <  1:1480838/62‑1 (MQ=255)
  gcagGAGCGTGCCTCATGAGCGAAACTTTTTTCCATCTGCTGGGGCCAGGAACGCAACCGaa  <  1:1557613/62‑1 (MQ=255)
  gcagGAGCGTGCCTCATGAGCGAAACTTTTTTCCATCTGCTGGGGCCAGGAACGCAACCGaa  <  1:1593189/62‑1 (MQ=255)
  gcagGAGCGTGCCTCATGAGCGAAACTTTTTTCCATCTGCTGGGGCCAGGAACGCAACCGaa  <  1:1598360/62‑1 (MQ=255)
  gcagGAGCGTGCCTCATGAGCGAAACTTTTTTCCATCTGCTGGGGCCAGGAACGCAACCGaa  <  1:1709592/62‑1 (MQ=255)
  gcagGAGCGTGCCTCATGAGCGAAACTTTTTTCCATCTGCTGGGGCCAGGAACGCAACCGaa  <  1:1815819/62‑1 (MQ=255)
  gcagGAGCGTGCCTCATGAGCGAAACTTTTTTCCATCTGCTGGGGCCAGGAACGCAACCGaa  <  1:1841593/62‑1 (MQ=255)
  gcagGAGCGTGCCTCATGAGCGAAACTTTTTTCCATCTGCTGGGGCCAGGAACGCAACCGaa  <  1:251825/62‑1 (MQ=255)
  gcagGAGCGTGCCTCATGAGCGAAACTTTTTTCCATCTGCTGGGGCCAGGAACGCAACCGaa  <  1:1907380/62‑1 (MQ=255)
  gcagGAGCGTGCCTCATGAGCGAAACTTTTTTCCATCTGCTGGGGCCAGGAACGCAACCGaa  <  1:2008624/62‑1 (MQ=255)
  gcagGAGCGTGCCTCATGAGCGAAACTTTTTTCCATCTGCTGGGGCCAGGAACGCAACCGaa  <  1:250305/62‑1 (MQ=255)
  gcagGAGCGTGCCTCATGAGCGAAACTTTTTTCCATCTGCTGGGGCCAGGAACGCAACCGaa  <  1:2459088/62‑1 (MQ=255)
  gcagGAGCGTGCCTCATGAGCGAAACTTTTTTCCATCTGCTGGGGCCAGGAACGCAACCGaa  <  1:2127425/62‑1 (MQ=255)
  gcagGAGCGTGCCTCATGAGCGAAACTTTTTTCCATCTGCTGGGGCCAGGAACGCAACCGaa  <  1:2140937/62‑1 (MQ=255)
  gcagGAGCGTGCCTCATGAGCGAAACTTTTTTCCATCTGCTGGGGCCAGGAACGCAACCGaa  <  1:2405373/62‑1 (MQ=255)
  gcagGAGCGTGCCTCATGAGCGAAACTTTTTTCCATCTGCTGGGGCCAGGAACGCAACCGaa  <  1:198328/62‑1 (MQ=255)
  gcagGAGCGTGCCTCATGAGCGAAACTTTTTTCCATCTGCTGGGGCCAGGAACGCAACCGaa  <  1:2246867/62‑1 (MQ=255)
  gcagGAGCGTGCCTCATGAGCGAAACTTTTTTCCACCTGTTGGGGCCAGGAACGCAACCGaa  <  1:1263426/62‑1 (MQ=255)
  gcagGAGCGTGCCTCACGAGCGAAACTTTTTTCCATCTGCTGGGGCCAGGAACGCAACCGaa  <  1:2009583/62‑1 (MQ=255)
   cagGAGCGTGCCTCATGAGCGAAACTTTTTTCCATCTGCTGGGGCCAGGAACGCAACCGaa  <  1:1048098/61‑1 (MQ=255)
   cagGAGCGTGCCTCATGAGCGAAACTTTTTTCCATCTGCTGGGGCCAGGAACGCAACCGaa  <  1:120957/61‑1 (MQ=255)
   cagGAGCGTGCCTCATGAGCGAAACTTTTTTCCATCTGCTGGGGCCAGGAACGCAACCGaa  <  1:2227076/61‑1 (MQ=255)
   cagGAGCGTGCCTCATGAGCGAAACTTTTTTCCATCTGCTGGGGCCAGGAACGCAACCGaa  <  1:1548983/61‑1 (MQ=255)
   cagGAGCGTGCCTCATGAGCGAAACTTTTTTCCATCTGCTGGGGCCAGGAACGCAACCGaa  <  1:3646453/61‑1 (MQ=255)
   cagGAGCGTGCCTCATGAGCGAAACTTTTTTCCATCTGCTGGGGCCAGGAACGCAACCGaa  <  1:1635082/61‑1 (MQ=255)
   cagGAGCGTGCCTCATGAGCGAAACTTTTTTCCATCTGCTGGGGCCAGGAACGCAACCGaa  <  1:2830745/61‑1 (MQ=255)
   cagGAGCGTGCCTCATGAGCGAAACTTTTTTCCATCTGCTGGGGCCAGGAACGCAACCGaa  <  1:2859455/61‑1 (MQ=255)
   cagGAGCGTGCCTCATGAGCGAAACTTTTTTCCATCTGCTGGGGCCAGGAACGCAACCGaa  <  1:2508583/61‑1 (MQ=255)
                cATGAGCGAAACTTTTTTCCATCTGCTGGGGCCAGGAACGCAACCGaa  <  1:2143524/48‑1 (MQ=255)
                       gAAACTTTTTTCCATCTGCTGGGGCCAGGAACGCAACCGaa  <  1:1894445/41‑1 (MQ=255)
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CAGCAGGAGCGTGCCTCATGAGCGAAACTTTTTTCCATCTGCTGGGGCCAGGAACGCAACCGAA  >  minE/693431‑693494

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: