Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	771355	771415	61	21 [0]	[0] 8	hflD	predicted lysogenization regulator

CAGGCGATTACGAGAAAACATCAGTTGCAGACGTCCGCCGCCGACCTGGTGCCAGAGCACGG  >  minE/771293‑771354                                                              | cAGGCGATTACGAGAAAACATCAGTTGCAGACGTCCGCCGCCGACCTGGTGCCAGAGCAcgg  <  1:2734166/62‑1 (MQ=255) cAGGCGATTACGAGAAAACATCAGTTGCAGACGTCCGCCGCCGACCTGGTGCCAGAGCAcgg  <  1:679780/62‑1 (MQ=255) cAGGCGATTACGAGAAAACATCAGTTGCAGACGTCCGCCGCCGACCTGGTGCCAGAGCAcgg  <  1:3584711/62‑1 (MQ=255) cAGGCGATTACGAGAAAACATCAGTTGCAGACGTCCGCCGCCGACCTGGTGCCAGAGCAcgg  <  1:3521210/62‑1 (MQ=255) cAGGCGATTACGAGAAAACATCAGTTGCAGACGTCCGCCGCCGACCTGGTGCCAGAGCAcgg  <  1:3220948/62‑1 (MQ=255) cAGGCGATTACGAGAAAACATCAGTTGCAGACGTCCGCCGCCGACCTGGTGCCAGAGCAcgg  <  1:3157961/62‑1 (MQ=255) cAGGCGATTACGAGAAAACATCAGTTGCAGACGTCCGCCGCCGACCTGGTGCCAGAGCAcgg  <  1:2891820/62‑1 (MQ=255) cAGGCGATTACGAGAAAACATCAGTTGCAGACGTCCGCCGCCGACCTGGTGCCAGAGCAcgg  <  1:2883863/62‑1 (MQ=255) cAGGCGATTACGAGAAAACATCAGTTGCAGACGTCCGCCGCCGACCTGGTGCCAGAGCAcgg  <  1:2791827/62‑1 (MQ=255) cAGGCGATTACGAGAAAACATCAGTTGCAGACGTCCGCCGCCGACCTGGTGCCAGAGCAcgg  <  1:2789621/62‑1 (MQ=255) cAGGCGATTACGAGAAAACATCAGTTGCAGACGTCCGCCGCCGACCTGGTGCCAGAGCAcgg  <  1:1048541/62‑1 (MQ=255) cAGGCGATTACGAGAAAACATCAGTTGCAGACGTCCGCCGCCGACCTGGTGCCAGAGCAcgg  <  1:2560499/62‑1 (MQ=255) cAGGCGATTACGAGAAAACATCAGTTGCAGACGTCCGCCGCCGACCTGGTGCCAGAGCAcgg  <  1:251757/62‑1 (MQ=255) cAGGCGATTACGAGAAAACATCAGTTGCAGACGTCCGCCGCCGACCTGGTGCCAGAGCAcgg  <  1:247480/62‑1 (MQ=255) cAGGCGATTACGAGAAAACATCAGTTGCAGACGTCCGCCGCCGACCTGGTGCCAGAGCAcgg  <  1:2277039/62‑1 (MQ=255) cAGGCGATTACGAGAAAACATCAGTTGCAGACGTCCGCCGCCGACCTGGTGCCAGAGCAcgg  <  1:2230316/62‑1 (MQ=255) cAGGCGATTACGAGAAAACATCAGTTGCAGACGTCCGCCGCCGACCTGGTGCCAGAGCAcgg  <  1:2144587/62‑1 (MQ=255) cAGGCGATTACGAGAAAACATCAGTTGCAGACGTCCGCCGCCGACCTGGTGCCAGAGCAcgg  <  1:1436174/62‑1 (MQ=255) cAGGCGATTACGAGAAAACATCAGTTGCAGACGTCCGCCGCCGACCTGGTGCCAGAGCAcgg  <  1:1383937/62‑1 (MQ=255) cAGGCGATTACGAGAAAACATCAGTTGCAGACGTCCGCCGCCGACCTGGTGCCAGAGCAcgg  <  1:1343302/62‑1 (MQ=255)  aGGCGATTACGAGAAAACATCAGTTGCAGACGTCCGCCGCCGACCTGGTGCCAGAGCAcgg  <  1:3283932/61‑1 (MQ=255)                                                              | CAGGCGATTACGAGAAAACATCAGTTGCAGACGTCCGCCGCCGACCTGGTGCCAGAGCACGG  >  minE/771293‑771354

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑