Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	795503	795521	19	56 [0]	[0] 52	emtA	lytic murein endotransglycosylase E

TCATCAAAGCATGACTATACGAACCCGCCGTGGAACGCGAAAGTTCCGGTGCAACGTGCGA  >  minE/795442‑795502                                                             | tcatcaAAGCATGACTATACGAACCCGCCGTTGAACGCGAAAGTTCCGGTGCAACGTGCGa  <  1:677792/61‑1 (MQ=255) tcatcaAAGCATGACTATACGAACCCGCCGTGGAACGCGAAAGTTCCGGTGCAACGTGCGa  <  1:3350941/61‑1 (MQ=255) tcatcaAAGCATGACTATACGAACCCGCCGTGGAACGCGAAAGTTCCGGTGCAACGTGCGa  <  1:2259961/61‑1 (MQ=255) tcatcaAAGCATGACTATACGAACCCGCCGTGGAACGCGAAAGTTCCGGTGCAACGTGCGa  <  1:2353229/61‑1 (MQ=255) tcatcaAAGCATGACTATACGAACCCGCCGTGGAACGCGAAAGTTCCGGTGCAACGTGCGa  <  1:2606137/61‑1 (MQ=255) tcatcaAAGCATGACTATACGAACCCGCCGTGGAACGCGAAAGTTCCGGTGCAACGTGCGa  <  1:2614360/61‑1 (MQ=255) tcatcaAAGCATGACTATACGAACCCGCCGTGGAACGCGAAAGTTCCGGTGCAACGTGCGa  <  1:2667450/61‑1 (MQ=255) tcatcaAAGCATGACTATACGAACCCGCCGTGGAACGCGAAAGTTCCGGTGCAACGTGCGa  <  1:2835614/61‑1 (MQ=255) tcatcaAAGCATGACTATACGAACCCGCCGTGGAACGCGAAAGTTCCGGTGCAACGTGCGa  <  1:2865129/61‑1 (MQ=255) tcatcaAAGCATGACTATACGAACCCGCCGTGGAACGCGAAAGTTCCGGTGCAACGTGCGa  <  1:2877910/61‑1 (MQ=255) tcatcaAAGCATGACTATACGAACCCGCCGTGGAACGCGAAAGTTCCGGTGCAACGTGCGa  <  1:2980660/61‑1 (MQ=255) tcatcaAAGCATGACTATACGAACCCGCCGTGGAACGCGAAAGTTCCGGTGCAACGTGCGa  <  1:32897/61‑1 (MQ=255) tcatcaAAGCATGACTATACGAACCCGCCGTGGAACGCGAAAGTTCCGGTGCAACGTGCGa  <  1:3310537/61‑1 (MQ=255) tcatcaAAGCATGACTATACGAACCCGCCGTGGAACGCGAAAGTTCCGGTGCAACGTGCGa  <  1:3338317/61‑1 (MQ=255) tcatcaAAGCATGACTATACGAACCCGCCGTGGAACGCGAAAGTTCCGGTGCAACGTGCGa  <  1:1068397/61‑1 (MQ=255) tcatcaAAGCATGACTATACGAACCCGCCGTGGAACGCGAAAGTTCCGGTGCAACGTGCGa  <  1:3390326/61‑1 (MQ=255) tcatcaAAGCATGACTATACGAACCCGCCGTGGAACGCGAAAGTTCCGGTGCAACGTGCGa  <  1:412675/61‑1 (MQ=255) tcatcaAAGCATGACTATACGAACCCGCCGTGGAACGCGAAAGTTCCGGTGCAACGTGCGa  <  1:416767/61‑1 (MQ=255) tcatcaAAGCATGACTATACGAACCCGCCGTGGAACGCGAAAGTTCCGGTGCAACGTGCGa  <  1:437264/61‑1 (MQ=255) tcatcaAAGCATGACTATACGAACCCGCCGTGGAACGCGAAAGTTCCGGTGCAACGTGCGa  <  1:484658/61‑1 (MQ=255) tcatcaAAGCATGACTATACGAACCCGCCGTGGAACGCGAAAGTTCCGGTGCAACGTGCGa  <  1:56950/61‑1 (MQ=255) tcatcaAAGCATGACTATACGAACCCGCCGTGGAACGCGAAAGTTCCGGTGCAACGTGCGa  <  1:617061/61‑1 (MQ=255) tcatcaAAGCATGACTATACGAACCCGCCGTGGAACGCGAAAGTTCCGGTGCAACGTGCGa  <  1:670388/61‑1 (MQ=255) tcatcaAAGCATGACTATACGAACCCGCCGTGGAACGCGAAAGTTCCGGTGCAACGTGCGa  <  1:839593/61‑1 (MQ=255) tcatcaAAGCATGACTATACGAACCCGCCGTGGAACGCGAAAGTTCCGGTGCAACGTGCGa  <  1:883024/61‑1 (MQ=255) tcatcaAAGCATGACTATACGAACCCGCCGTGGAACGCGAAAGTTCCGGTGCAACGTGCGa  <  1:924730/61‑1 (MQ=255) tcatcaAAGCATGACTATACGAACCCGCCGTGGAACGCGAAAGTTCCGGTGCAACGTGCGa  <  1:1688962/61‑1 (MQ=255) tcatcaAAGCATGACTATACGAACCCGCCGTGGAACGCGAAAGTTCCGGTGCAACGTGCGa  <  1:1160634/61‑1 (MQ=255) tcatcaAAGCATGACTATACGAACCCGCCGTGGAACGCGAAAGTTCCGGTGCAACGTGCGa  <  1:1225562/61‑1 (MQ=255) tcatcaAAGCATGACTATACGAACCCGCCGTGGAACGCGAAAGTTCCGGTGCAACGTGCGa  <  1:1387023/61‑1 (MQ=255) tcatcaAAGCATGACTATACGAACCCGCCGTGGAACGCGAAAGTTCCGGTGCAACGTGCGa  <  1:1469245/61‑1 (MQ=255) tcatcaAAGCATGACTATACGAACCCGCCGTGGAACGCGAAAGTTCCGGTGCAACGTGCGa  <  1:1503776/61‑1 (MQ=255) tcatcaAAGCATGACTATACGAACCCGCCGTGGAACGCGAAAGTTCCGGTGCAACGTGCGa  <  1:1545797/61‑1 (MQ=255) tcatcaAAGCATGACTATACGAACCCGCCGTGGAACGCGAAAGTTCCGGTGCAACGTGCGa  <  1:1549902/61‑1 (MQ=255) tcatcaAAGCATGACTATACGAACCCGCCGTGGAACGCGAAAGTTCCGGTGCAACGTGCGa  <  1:1613268/61‑1 (MQ=255) tcatcaAAGCATGACTATACGAACCCGCCGTGGAACGCGAAAGTTCCGGTGCAACGTGCGa  <  1:1140053/61‑1 (MQ=255) tcatcaAAGCATGACTATACGAACCCGCCGTGGAACGCGAAAGTTCCGGTGCAACGTGCGa  <  1:1651500/61‑1 (MQ=255) tcatcaAAGCATGACTATACGAACCCGCCGTGGAACGCGAAAGTTCCGGTGCAACGTGCGa  <  1:1660946/61‑1 (MQ=255) tcatcaAAGCATGACTATACGAACCCGCCGTGGAACGCGAAAGTTCCGGTGCAACGTGCGa  <  1:177410/61‑1 (MQ=255) tcatcaAAGCATGACTATACGAACCCGCCGTGGAACGCGAAAGTTCCGGTGCAACGTGCGa  <  1:1897169/61‑1 (MQ=255) tcatcaAAGCATGACTATACGAACCCGCCGTGGAACGCGAAAGTTCCGGTGCAACGTGCGa  <  1:196686/61‑1 (MQ=255) tcatcaAAGCATGACTATACGAACCCGCCGTGGAACGCGAAAGTTCCGGTGCAACGTGCGa  <  1:2005407/61‑1 (MQ=255) tcatcaAAGCATGACTATACGAACCCGCCGTGGAACGCGAAAGTTCCGGTGCAACGTGCGa  <  1:2006593/61‑1 (MQ=255) tcatcaAAGCATGACTATACGAACCCGCCGTGGAACGCGAAAGTTCCGGTGCAACGTGCGa  <  1:2011717/61‑1 (MQ=255) tcatcaAAGCATGACTATACGAACCCGCCGTGGAACGCGAAAGTTCCGGTGCAACGTGCGa  <  1:20437/61‑1 (MQ=255) tcatcaAAGCATGACTATACGAACCCGCCGTGGAACGCGAAAGTTCCGGTGCAACGTGCGa  <  1:2087083/61‑1 (MQ=255) tcatcaAAGCATGACTATACGAACCCGCCGTGGAACGCGAAAGTTCCGGTGCAACGTGCGa  <  1:2100704/61‑1 (MQ=255) tcatcaAAGCATGACTATACGAACCCGCCGTGGAACGCGAAAGTTCCGGTGCAACGTGCGa  <  1:2197565/61‑1 (MQ=255) tcatcaAAGCATGACTATACGAACCCGCCGTGGAACGCGAAAGTTCCGGTGCAACGTGCGa  <  1:2213175/61‑1 (MQ=255) tcatcaAAGCATGACTATACGAACCCGCCGCGGAACGCGAAAGTTCCGGTGCAACGTGCGa  <  1:1248017/61‑1 (MQ=255) tcatcaAAGCATGACTATACCAACCCGCCGTGGAACGCGAAAGTTCCGGTGCAACGTGCGa  <  1:1017780/61‑1 (MQ=255)  catcaAAGCATGACTATACGAACCCGCCGTGGAACGCGAAAGTTCCGGTGCAACGTGCGa  <  1:2344341/60‑1 (MQ=255)  catcaAAGCATGACTATACGAACCCGCCGTGGAACGCGAAAGTTCCGGTGCAACGTGCGa  <  1:932488/60‑1 (MQ=255)  catcaAAGCATGACTATACGAACCCGCCGTGGAACGCGAAAGTTCCGGTGCAACGTGCGa  <  1:2606394/60‑1 (MQ=255)           aTGACTATACGAACCCGCCGTGGAACGCGAAAGTTCCGGTGCAACGTGCGa  <  1:3492589/51‑1 (MQ=255)                      aaCCCGCCGTGGAACGCGAAAGTTCCGGTGCAACGTGCGa  <  1:3385787/40‑1 (MQ=255)                                                             | TCATCAAAGCATGACTATACGAACCCGCCGTGGAACGCGAAAGTTCCGGTGCAACGTGCGA  >  minE/795442‑795502

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑