Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	944893	944978	86	87 [0]	[1] 39	ddpC	D‑Ala‑D‑Ala transporter subunit

CAATGGCGTTGGGATCATGCGTCGCCAGCCACGGTGAAAAAATCATCATCAATAGCATTAATA  >  minE/944830‑944892                                                               | cAATGGCGTTGGGATCATGCGTCGCCAGCCACGGTG‑AAAAATCATCATCAATAGCATTAATa  <  1:2996768/62‑1 (MQ=255)  aaTGGCGTTGGGATCATGTGTCGCCAGCCACGGTGAAAAAATCATCATCAATAGCATTAATa  <  1:2042203/62‑1 (MQ=255)  aaTGGCGTTGGGATCATGCGTCGCCAGCCACGGTGAAAAAATCATCATCAATAGCATTAATa  <  1:2958308/62‑1 (MQ=255)  aaTGGCGTTGGGATCATGCGTCGCCAGCCACGGTGAAAAAATCATCATCAATAGCATTAATa  <  1:3380245/62‑1 (MQ=255)  aaTGGCGTTGGGATCATGCGTCGCCAGCCACGGTGAAAAAATCATCATCAATAGCATTAATa  <  1:330327/62‑1 (MQ=255)  aaTGGCGTTGGGATCATGCGTCGCCAGCCACGGTGAAAAAATCATCATCAATAGCATTAATa  <  1:326309/62‑1 (MQ=255)  aaTGGCGTTGGGATCATGCGTCGCCAGCCACGGTGAAAAAATCATCATCAATAGCATTAATa  <  1:3262656/62‑1 (MQ=255)  aaTGGCGTTGGGATCATGCGTCGCCAGCCACGGTGAAAAAATCATCATCAATAGCATTAATa  <  1:3177740/62‑1 (MQ=255)  aaTGGCGTTGGGATCATGCGTCGCCAGCCACGGTGAAAAAATCATCATCAATAGCATTAATa  <  1:3170603/62‑1 (MQ=255)  aaTGGCGTTGGGATCATGCGTCGCCAGCCACGGTGAAAAAATCATCATCAATAGCATTAATa  <  1:3095609/62‑1 (MQ=255)  aaTGGCGTTGGGATCATGCGTCGCCAGCCACGGTGAAAAAATCATCATCAATAGCATTAATa  <  1:3016754/62‑1 (MQ=255)  aaTGGCGTTGGGATCATGCGTCGCCAGCCACGGTGAAAAAATCATCATCAATAGCATTAATa  <  1:3404909/62‑1 (MQ=255)  aaTGGCGTTGGGATCATGCGTCGCCAGCCACGGTGAAAAAATCATCATCAATAGCATTAATa  <  1:2899464/62‑1 (MQ=255)  aaTGGCGTTGGGATCATGCGTCGCCAGCCACGGTGAAAAAATCATCATCAATAGCATTAATa  <  1:2853745/62‑1 (MQ=255)  aaTGGCGTTGGGATCATGCGTCGCCAGCCACGGTGAAAAAATCATCATCAATAGCATTAATa  <  1:285112/62‑1 (MQ=255)  aaTGGCGTTGGGATCATGCGTCGCCAGCCACGGTGAAAAAATCATCATCAATAGCATTAATa  <  1:2845402/62‑1 (MQ=255)  aaTGGCGTTGGGATCATGCGTCGCCAGCCACGGTGAAAAAATCATCATCAATAGCATTAATa  <  1:2839302/62‑1 (MQ=255)  aaTGGCGTTGGGATCATGCGTCGCCAGCCACGGTGAAAAAATCATCATCAATAGCATTAATa  <  1:2835079/62‑1 (MQ=255)  aaTGGCGTTGGGATCATGCGTCGCCAGCCACGGTGAAAAAATCATCATCAATAGCATTAATa  <  1:2781612/62‑1 (MQ=255)  aaTGGCGTTGGGATCATGCGTCGCCAGCCACGGTGAAAAAATCATCATCAATAGCATTAATa  <  1:2775095/62‑1 (MQ=255)  aaTGGCGTTGGGATCATGCGTCGCCAGCCACGGTGAAAAAATCATCATCAATAGCATTAATa  <  1:2623049/62‑1 (MQ=255)  aaTGGCGTTGGGATCATGCGTCGCCAGCCACGGTGAAAAAATCATCATCAATAGCATTAATa  <  1:1007011/62‑1 (MQ=255)  aaTGGCGTTGGGATCATGCGTCGCCAGCCACGGTGAAAAAATCATCATCAATAGCATTAATa  <  1:599513/62‑1 (MQ=255)  aaTGGCGTTGGGATCATGCGTCGCCAGCCACGGTGAAAAAATCATCATCAATAGCATTAATa  <  1:991853/62‑1 (MQ=255)  aaTGGCGTTGGGATCATGCGTCGCCAGCCACGGTGAAAAAATCATCATCAATAGCATTAATa  <  1:922323/62‑1 (MQ=255)  aaTGGCGTTGGGATCATGCGTCGCCAGCCACGGTGAAAAAATCATCATCAATAGCATTAATa  <  1:841721/62‑1 (MQ=255)  aaTGGCGTTGGGATCATGCGTCGCCAGCCACGGTGAAAAAATCATCATCAATAGCATTAATa  <  1:828205/62‑1 (MQ=255)  aaTGGCGTTGGGATCATGCGTCGCCAGCCACGGTGAAAAAATCATCATCAATAGCATTAATa  <  1:77503/62‑1 (MQ=255)  aaTGGCGTTGGGATCATGCGTCGCCAGCCACGGTGAAAAAATCATCATCAATAGCATTAATa  <  1:774227/62‑1 (MQ=255)  aaTGGCGTTGGGATCATGCGTCGCCAGCCACGGTGAAAAAATCATCATCAATAGCATTAATa  <  1:683759/62‑1 (MQ=255)  aaTGGCGTTGGGATCATGCGTCGCCAGCCACGGTGAAAAAATCATCATCAATAGCATTAATa  <  1:68123/62‑1 (MQ=255)  aaTGGCGTTGGGATCATGCGTCGCCAGCCACGGTGAAAAAATCATCATCAATAGCATTAATa  <  1:636112/62‑1 (MQ=255)  aaTGGCGTTGGGATCATGCGTCGCCAGCCACGGTGAAAAAATCATCATCAATAGCATTAATa  <  1:63595/62‑1 (MQ=255)  aaTGGCGTTGGGATCATGCGTCGCCAGCCACGGTGAAAAAATCATCATCAATAGCATTAATa  <  1:2606762/62‑1 (MQ=255)  aaTGGCGTTGGGATCATGCGTCGCCAGCCACGGTGAAAAAATCATCATCAATAGCATTAATa  <  1:551983/62‑1 (MQ=255)  aaTGGCGTTGGGATCATGCGTCGCCAGCCACGGTGAAAAAATCATCATCAATAGCATTAATa  <  1:551064/62‑1 (MQ=255)  aaTGGCGTTGGGATCATGCGTCGCCAGCCACGGTGAAAAAATCATCATCAATAGCATTAATa  <  1:524369/62‑1 (MQ=255)  aaTGGCGTTGGGATCATGCGTCGCCAGCCACGGTGAAAAAATCATCATCAATAGCATTAATa  <  1:468839/62‑1 (MQ=255)  aaTGGCGTTGGGATCATGCGTCGCCAGCCACGGTGAAAAAATCATCATCAATAGCATTAATa  <  1:431892/62‑1 (MQ=255)  aaTGGCGTTGGGATCATGCGTCGCCAGCCACGGTGAAAAAATCATCATCAATAGCATTAATa  <  1:3492072/62‑1 (MQ=255)  aaTGGCGTTGGGATCATGCGTCGCCAGCCACGGTGAAAAAATCATCATCAATAGCATTAATa  <  1:3456191/62‑1 (MQ=255)  aaTGGCGTTGGGATCATGCGTCGCCAGCCACGGTGAAAAAATCATCATCAATAGCATTAATa  <  1:3454224/62‑1 (MQ=255)  aaTGGCGTTGGGATCATGCGTCGCCAGCCACGGTGAAAAAATCATCATCAATAGCATTAATa  <  1:3429598/62‑1 (MQ=255)  aaTGGCGTTGGGATCATGCGTCGCCAGCCACGGTGAAAAAATCATCATCAATAGCATTAATa  <  1:1539407/62‑1 (MQ=255)  aaTGGCGTTGGGATCATGCGTCGCCAGCCACGGTGAAAAAATCATCATCAATAGCATTAATa  <  1:2541685/62‑1 (MQ=255)  aaTGGCGTTGGGATCATGCGTCGCCAGCCACGGTGAAAAAATCATCATCAATAGCATTAATa  <  1:1863168/62‑1 (MQ=255)  aaTGGCGTTGGGATCATGCGTCGCCAGCCACGGTGAAAAAATCATCATCAATAGCATTAATa  <  1:181543/62‑1 (MQ=255)  aaTGGCGTTGGGATCATGCGTCGCCAGCCACGGTGAAAAAATCATCATCAATAGCATTAATa  <  1:1806928/62‑1 (MQ=255)  aaTGGCGTTGGGATCATGCGTCGCCAGCCACGGTGAAAAAATCATCATCAATAGCATTAATa  <  1:178601/62‑1 (MQ=255)  aaTGGCGTTGGGATCATGCGTCGCCAGCCACGGTGAAAAAATCATCATCAATAGCATTAATa  <  1:1745710/62‑1 (MQ=255)  aaTGGCGTTGGGATCATGCGTCGCCAGCCACGGTGAAAAAATCATCATCAATAGCATTAATa  <  1:1710916/62‑1 (MQ=255)  aaTGGCGTTGGGATCATGCGTCGCCAGCCACGGTGAAAAAATCATCATCAATAGCATTAATa  <  1:1645535/62‑1 (MQ=255)  aaTGGCGTTGGGATCATGCGTCGCCAGCCACGGTGAAAAAATCATCATCAATAGCATTAATa  <  1:1643595/62‑1 (MQ=255)  aaTGGCGTTGGGATCATGCGTCGCCAGCCACGGTGAAAAAATCATCATCAATAGCATTAATa  <  1:1633892/62‑1 (MQ=255)  aaTGGCGTTGGGATCATGCGTCGCCAGCCACGGTGAAAAAATCATCATCAATAGCATTAATa  <  1:1935217/62‑1 (MQ=255)  aaTGGCGTTGGGATCATGCGTCGCCAGCCACGGTGAAAAAATCATCATCAATAGCATTAATa  <  1:1523068/62‑1 (MQ=255)  aaTGGCGTTGGGATCATGCGTCGCCAGCCACGGTGAAAAAATCATCATCAATAGCATTAATa  <  1:1449077/62‑1 (MQ=255)  aaTGGCGTTGGGATCATGCGTCGCCAGCCACGGTGAAAAAATCATCATCAATAGCATTAATa  <  1:1437140/62‑1 (MQ=255)  aaTGGCGTTGGGATCATGCGTCGCCAGCCACGGTGAAAAAATCATCATCAATAGCATTAATa  <  1:1413818/62‑1 (MQ=255)  aaTGGCGTTGGGATCATGCGTCGCCAGCCACGGTGAAAAAATCATCATCAATAGCATTAATa  <  1:1404340/62‑1 (MQ=255)  aaTGGCGTTGGGATCATGCGTCGCCAGCCACGGTGAAAAAATCATCATCAATAGCATTAATa  <  1:1351752/62‑1 (MQ=255)  aaTGGCGTTGGGATCATGCGTCGCCAGCCACGGTGAAAAAATCATCATCAATAGCATTAATa  <  1:1299424/62‑1 (MQ=255)  aaTGGCGTTGGGATCATGCGTCGCCAGCCACGGTGAAAAAATCATCATCAATAGCATTAATa  <  1:1239251/62‑1 (MQ=255)  aaTGGCGTTGGGATCATGCGTCGCCAGCCACGGTGAAAAAATCATCATCAATAGCATTAATa  <  1:1024966/62‑1 (MQ=255)  aaTGGCGTTGGGATCATGCGTCGCCAGCCACGGTGAAAAAATCATCATCAATAGCATTAATa  <  1:1007841/62‑1 (MQ=255)  aaTGGCGTTGGGATCATGCGTCGCCAGCCACGGTGAAAAAATCATCATCAATAGCATTAATa  <  1:2088671/62‑1 (MQ=255)  aaTGGCGTTGGGATCATGCGTCGCCAGCCACGGTGAAAAAATCATCATCAATAGCATTAATa  <  1:2541134/62‑1 (MQ=255)  aaTGGCGTTGGGATCATGCGTCGCCAGCCACGGTGAAAAAATCATCATCAATAGCATTAATa  <  1:2538100/62‑1 (MQ=255)  aaTGGCGTTGGGATCATGCGTCGCCAGCCACGGTGAAAAAATCATCATCAATAGCATTAATa  <  1:2531494/62‑1 (MQ=255)  aaTGGCGTTGGGATCATGCGTCGCCAGCCACGGTGAAAAAATCATCATCAATAGCATTAATa  <  1:2524582/62‑1 (MQ=255)  aaTGGCGTTGGGATCATGCGTCGCCAGCCACGGTGAAAAAATCATCATCAATAGCATTAATa  <  1:244765/62‑1 (MQ=255)  aaTGGCGTTGGGATCATGCGTCGCCAGCCACGGTGAAAAAATCATCATCAATAGCATTAATa  <  1:2392996/62‑1 (MQ=255)  aaTGGCGTTGGGATCATGCGTCGCCAGCCACGGTGAAAAAATCATCATCAATAGCATTAATa  <  1:2388830/62‑1 (MQ=255)  aaTGGCGTTGGGATCATGCGTCGCCAGCCACGGTGAAAAAATCATCATCAATAGCATTAATa  <  1:2363376/62‑1 (MQ=255)  aaTGGCGTTGGGATCATGCGTCGCCAGCCACGGTGAAAAAATCATCATCAATAGCATTAATa  <  1:2259015/62‑1 (MQ=255)  aaTGGCGTTGGGATCATGCGTCGCCAGCCACGGTGAAAAAATCATCATCAATAGCATTAATa  <  1:2229814/62‑1 (MQ=255)  aaTGGCGTTGGGATCATGCGTCGCCAGCCACGGTGAAAAAATCATCATCAATAGCATTAATa  <  1:2219217/62‑1 (MQ=255)  aaTGGCGTTGGGATCATGCGTCGCCAGCCACGGTGAAAAAATCATCATCAATAGCATTAATa  <  1:2204698/62‑1 (MQ=255)  aaTGGCGTTGGGATCATGCGTCGCCAGCCACGGTGAAAAAATCATCATCAATAGCATTAATa  <  1:216382/62‑1 (MQ=255)  aaTGGCGTTGGGATCATGCGTCGCCAGCCACGGTGAAAAAATCATCATCAATAGCATTAATa  <  1:2142581/62‑1 (MQ=255)  aaTGGCGTTGGGATCATGCGTCGCCAGCCACGGTGAAAAAATCATCATCAATAGCATTAATa  <  1:2118244/62‑1 (MQ=255)  aaTGGCGTTGGGATCATGCGTCGCCAGCCACGGTGAAAAAATCATCATCAATAGCATTAATa  <  1:2112626/62‑1 (MQ=255)  aaTGGCGTTGGGATCATGCGTCGCCAGCCACGGTGAAAAAATCATCATCAATAGCATTAATa  <  1:2067779/62‑1 (MQ=255)   aTGGCGTTGGGATCATGCGTCGCCAGCCACGGTGAAAAAATCATCATCAATAGCATTAATa  <  1:2926396/61‑1 (MQ=255)   aTGGCGTTGGGATCATGCGTCGCCAGCCACGGTGAAAAAATCATCATCAATAGCATTAATa  <  1:2306578/61‑1 (MQ=255)   aTGGCGTTGGGATCATGCGTCGCCAGACACGGTGAAAAAATCATCATCAATAGCATTAATa  <  1:2773464/61‑1 (MQ=255)                         ccagccaCGGTGAAAAAATCATCATCAATAGCATTAATa  <  1:823927/39‑1 (MQ=255)                                                               | CAATGGCGTTGGGATCATGCGTCGCCAGCCACGGTGAAAAAATCATCATCAATAGCATTAATA  >  minE/944830‑944892

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑