Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	1233349	1233356	8	57 [0]	[0] 2	yebE	conserved hypothetical protein

GGCAAAGACCAGCGCAAGGATCAAACGTGCTGTACGCTCATCCAGCGGCGTACTTTGCGCG  >  minE/1233288‑1233348                                                             | ggCAAAGACCAGCGCAAGGATCAAACGTGCTGTACGCTCATCCAGCGGCGTACTTTgcgcg  >  1:3569063/1‑61 (MQ=255) ggCAAAGACCAGCGCAAGGATCAAACGTGCTGTACGCTCATCCAGCGGCGTACTTTgcgcg  >  1:2957036/1‑61 (MQ=255) ggCAAAGACCAGCGCAAGGATCAAACGTGCTGTACGCTCATCCAGCGGCGTACTTTgcgcg  >  1:2976607/1‑61 (MQ=255) ggCAAAGACCAGCGCAAGGATCAAACGTGCTGTACGCTCATCCAGCGGCGTACTTTgcgcg  >  1:2994282/1‑61 (MQ=255) ggCAAAGACCAGCGCAAGGATCAAACGTGCTGTACGCTCATCCAGCGGCGTACTTTgcgcg  >  1:3059383/1‑61 (MQ=255) ggCAAAGACCAGCGCAAGGATCAAACGTGCTGTACGCTCATCCAGCGGCGTACTTTgcgcg  >  1:3073057/1‑61 (MQ=255) ggCAAAGACCAGCGCAAGGATCAAACGTGCTGTACGCTCATCCAGCGGCGTACTTTgcgcg  >  1:3083209/1‑61 (MQ=255) ggCAAAGACCAGCGCAAGGATCAAACGTGCTGTACGCTCATCCAGCGGCGTACTTTgcgcg  >  1:3212058/1‑61 (MQ=255) ggCAAAGACCAGCGCAAGGATCAAACGTGCTGTACGCTCATCCAGCGGCGTACTTTgcgcg  >  1:3231347/1‑61 (MQ=255) ggCAAAGACCAGCGCAAGGATCAAACGTGCTGTACGCTCATCCAGCGGCGTACTTTgcgcg  >  1:3231666/1‑61 (MQ=255) ggCAAAGACCAGCGCAAGGATCAAACGTGCTGTACGCTCATCCAGCGGCGTACTTTgcgcg  >  1:3323104/1‑61 (MQ=255) ggCAAAGACCAGCGCAAGGATCAAACGTGCTGTACGCTCATCCAGCGGCGTACTTTgcgcg  >  1:3355669/1‑61 (MQ=255) ggCAAAGACCAGCGCAAGGATCAAACGTGCTGTACGCTCATCCAGCGGCGTACTTTgcgcg  >  1:3405084/1‑61 (MQ=255) ggCAAAGACCAGCGCAAGGATCAAACGTGCTGTACGCTCATCCAGCGGCGTACTTTgcgcg  >  1:3418094/1‑61 (MQ=255) ggCAAAGACCAGCGCAAGGATCAAACGTGCTGTACGCTCATCCAGCGGCGTACTTTgcgcg  >  1:3476367/1‑61 (MQ=255) ggCAAAGACCAGCGCAAGGATCAAACGTGCTGTACGCTCATCCAGCGGCGTACTTTgcgcg  >  1:2951519/1‑61 (MQ=255) ggCAAAGACCAGCGCAAGGATCAAACGTGCTGTACGCTCATCCAGCGGCGTACTTTgcgcg  >  1:3571711/1‑61 (MQ=255) ggCAAAGACCAGCGCAAGGATCAAACGTGCTGTACGCTCATCCAGCGGCGTACTTTgcgcg  >  1:3621883/1‑61 (MQ=255) ggCAAAGACCAGCGCAAGGATCAAACGTGCTGTACGCTCATCCAGCGGCGTACTTTgcgcg  >  1:384125/1‑61 (MQ=255) ggCAAAGACCAGCGCAAGGATCAAACGTGCTGTACGCTCATCCAGCGGCGTACTTTgcgcg  >  1:4007/1‑61 (MQ=255) ggCAAAGACCAGCGCAAGGATCAAACGTGCTGTACGCTCATCCAGCGGCGTACTTTgcgcg  >  1:403892/1‑61 (MQ=255) ggCAAAGACCAGCGCAAGGATCAAACGTGCTGTACGCTCATCCAGCGGCGTACTTTgcgcg  >  1:438693/1‑61 (MQ=255) ggCAAAGACCAGCGCAAGGATCAAACGTGCTGTACGCTCATCCAGCGGCGTACTTTgcgcg  >  1:569064/1‑61 (MQ=255) ggCAAAGACCAGCGCAAGGATCAAACGTGCTGTACGCTCATCCAGCGGCGTACTTTgcgcg  >  1:636285/1‑61 (MQ=255) ggCAAAGACCAGCGCAAGGATCAAACGTGCTGTACGCTCATCCAGCGGCGTACTTTgcgcg  >  1:646570/1‑61 (MQ=255) ggCAAAGACCAGCGCAAGGATCAAACGTGCTGTACGCTCATCCAGCGGCGTACTTTgcgcg  >  1:719812/1‑61 (MQ=255) ggCAAAGACCAGCGCAAGGATCAAACGTGCTGTACGCTCATCCAGCGGCGTACTTTgcgcg  >  1:724461/1‑61 (MQ=255) ggCAAAGACCAGCGCAAGGATCAAACGTGCTGTACGCTCATCCAGCGGCGTACTTTgcgcg  >  1:788381/1‑61 (MQ=255) ggCAAAGACCAGCGCAAGGATCAAACGTGCTGTACGCTCATCCAGCGGCGTACTTTgcgcg  >  1:980773/1‑61 (MQ=255) ggCAAAGACCAGCGCAAGGATCAAACGTGCTGTACGCTCATCCAGCGGCGTACTTTgcgcg  >  1:1966912/1‑61 (MQ=255) ggCAAAGACCAGCGCAAGGATCAAACGTGCTGTACGCTCATCCAGCGGCGTACTTTgcgcg  >  1:1083332/1‑61 (MQ=255) ggCAAAGACCAGCGCAAGGATCAAACGTGCTGTACGCTCATCCAGCGGCGTACTTTgcgcg  >  1:1227911/1‑61 (MQ=255) ggCAAAGACCAGCGCAAGGATCAAACGTGCTGTACGCTCATCCAGCGGCGTACTTTgcgcg  >  1:1429065/1‑61 (MQ=255) ggCAAAGACCAGCGCAAGGATCAAACGTGCTGTACGCTCATCCAGCGGCGTACTTTgcgcg  >  1:1490882/1‑61 (MQ=255) ggCAAAGACCAGCGCAAGGATCAAACGTGCTGTACGCTCATCCAGCGGCGTACTTTgcgcg  >  1:1537000/1‑61 (MQ=255) ggCAAAGACCAGCGCAAGGATCAAACGTGCTGTACGCTCATCCAGCGGCGTACTTTgcgcg  >  1:1544804/1‑61 (MQ=255) ggCAAAGACCAGCGCAAGGATCAAACGTGCTGTACGCTCATCCAGCGGCGTACTTTgcgcg  >  1:1609694/1‑61 (MQ=255) ggCAAAGACCAGCGCAAGGATCAAACGTGCTGTACGCTCATCCAGCGGCGTACTTTgcgcg  >  1:1719714/1‑61 (MQ=255) ggCAAAGACCAGCGCAAGGATCAAACGTGCTGTACGCTCATCCAGCGGCGTACTTTgcgcg  >  1:1730276/1‑61 (MQ=255) ggCAAAGACCAGCGCAAGGATCAAACGTGCTGTACGCTCATCCAGCGGCGTACTTTgcgcg  >  1:1867856/1‑61 (MQ=255) ggCAAAGACCAGCGCAAGGATCAAACGTGCTGTACGCTCATCCAGCGGCGTACTTTgcgcg  >  1:1874900/1‑61 (MQ=255) ggCAAAGACCAGCGCAAGGATCAAACGTGCTGTACGCTCATCCAGCGGCGTACTTTgcgcg  >  1:1937633/1‑61 (MQ=255) ggCAAAGACCAGCGCAAGGATCAAACGTGCTGTACGCTCATCCAGCGGCGTACTTTgcgcg  >  1:1945162/1‑61 (MQ=255) ggCAAAGACCAGCGCAAGGATCAAACGTGCTGTACGCTCATCCAGCGGCGTACTTTgcgcg  >  1:1071545/1‑61 (MQ=255) ggCAAAGACCAGCGCAAGGATCAAACGTGCTGTACGCTCATCCAGCGGCGTACTTTgcgcg  >  1:2079416/1‑61 (MQ=255) ggCAAAGACCAGCGCAAGGATCAAACGTGCTGTACGCTCATCCAGCGGCGTACTTTgcgcg  >  1:2137712/1‑61 (MQ=255) ggCAAAGACCAGCGCAAGGATCAAACGTGCTGTACGCTCATCCAGCGGCGTACTTTgcgcg  >  1:2262692/1‑61 (MQ=255) ggCAAAGACCAGCGCAAGGATCAAACGTGCTGTACGCTCATCCAGCGGCGTACTTTgcgcg  >  1:2301582/1‑61 (MQ=255) ggCAAAGACCAGCGCAAGGATCAAACGTGCTGTACGCTCATCCAGCGGCGTACTTTgcgcg  >  1:2318409/1‑61 (MQ=255) ggCAAAGACCAGCGCAAGGATCAAACGTGCTGTACGCTCATCCAGCGGCGTACTTTgcgcg  >  1:2358088/1‑61 (MQ=255) ggCAAAGACCAGCGCAAGGATCAAACGTGCTGTACGCTCATCCAGCGGCGTACTTTgcgcg  >  1:2428684/1‑61 (MQ=255) ggCAAAGACCAGCGCAAGGATCAAACGTGCTGTACGCTCATCCAGCGGCGTACTTTgcgcg  >  1:2518694/1‑61 (MQ=255) ggCAAAGACCAGCGCAAGGATCAAACGTGCTGTACGCTCATCCAGCGGCGTACTTTgcgcg  >  1:276889/1‑61 (MQ=255) ggCAAAGACCAGCGCAAGGATCAAACGTGCTGTACGCTCATCCAGCGGCGTACTTTgcgcg  >  1:2831252/1‑61 (MQ=255) ggCAAAGACCAGCGCAAGGATCAAACGTGCTGTACGCTCATCCAGCGGCGTACTTTgcgcg  >  1:2835482/1‑61 (MQ=255) ggCAAAGACCAGCGCAAGGATCAAACGTGCTGTACGCTCATCCAGCGGCGTACTTTgcgcg  >  1:2848744/1‑61 (MQ=255) ggCAAAGACCAGCGCAAGGATCAAACGTGCTGTACGCTCATCCAGCGGCGTACTTTgcgcg  >  1:2912072/1‑61 (MQ=255)                                                             | GGCAAAGACCAGCGCAAGGATCAAACGTGCTGTACGCTCATCCAGCGGCGTACTTTGCGCG  >  minE/1233288‑1233348

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑