Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	1242413	1242471	59	78 [0]	[0] 33	pykA	pyruvate kinase II

GGTCGGCATTCAGAAAGCGTTGATCCGTCGTGCGCGTCAGCTAAACCGAGCGGTAATCACGGC  >  minE/1242350‑1242412                                                               | ggTCGGCATTCAGAAAGCGTT‑ATCCGTCGTGCGCGTCAGCTAAACCGAGCGGTAATCACGGc  <  1:195148/62‑1 (MQ=255)    cGGCATTCAGAAAGCGTTGATCCGTCGTGCGCGTCAGCTAAACCGAGCTGTAATCACGGc  <  1:662567/60‑1 (MQ=255)    cGGCATTCAGAAAGCGTTGATCCGTCGTGCGCGTCAGCTAAACCGAGCGGTAATCACGGc  <  1:3116307/60‑1 (MQ=255)    cGGCATTCAGAAAGCGTTGATCCGTCGTGCGCGTCAGCTAAACCGAGCGGTAATCACGGc  <  1:3349073/60‑1 (MQ=255)    cGGCATTCAGAAAGCGTTGATCCGTCGTGCGCGTCAGCTAAACCGAGCGGTAATCACGGc  <  1:3346082/60‑1 (MQ=255)    cGGCATTCAGAAAGCGTTGATCCGTCGTGCGCGTCAGCTAAACCGAGCGGTAATCACGGc  <  1:33323/60‑1 (MQ=255)    cGGCATTCAGAAAGCGTTGATCCGTCGTGCGCGTCAGCTAAACCGAGCGGTAATCACGGc  <  1:3322915/60‑1 (MQ=255)    cGGCATTCAGAAAGCGTTGATCCGTCGTGCGCGTCAGCTAAACCGAGCGGTAATCACGGc  <  1:3253422/60‑1 (MQ=255)    cGGCATTCAGAAAGCGTTGATCCGTCGTGCGCGTCAGCTAAACCGAGCGGTAATCACGGc  <  1:3222642/60‑1 (MQ=255)    cGGCATTCAGAAAGCGTTGATCCGTCGTGCGCGTCAGCTAAACCGAGCGGTAATCACGGc  <  1:3216133/60‑1 (MQ=255)    cGGCATTCAGAAAGCGTTGATCCGTCGTGCGCGTCAGCTAAACCGAGCGGTAATCACGGc  <  1:3151474/60‑1 (MQ=255)    cGGCATTCAGAAAGCGTTGATCCGTCGTGCGCGTCAGCTAAACCGAGCGGTAATCACGGc  <  1:3424107/60‑1 (MQ=255)    cGGCATTCAGAAAGCGTTGATCCGTCGTGCGCGTCAGCTAAACCGAGCGGTAATCACGGc  <  1:3106340/60‑1 (MQ=255)    cGGCATTCAGAAAGCGTTGATCCGTCGTGCGCGTCAGCTAAACCGAGCGGTAATCACGGc  <  1:310336/60‑1 (MQ=255)    cGGCATTCAGAAAGCGTTGATCCGTCGTGCGCGTCAGCTAAACCGAGCGGTAATCACGGc  <  1:3027390/60‑1 (MQ=255)    cGGCATTCAGAAAGCGTTGATCCGTCGTGCGCGTCAGCTAAACCGAGCGGTAATCACGGc  <  1:2981804/60‑1 (MQ=255)    cGGCATTCAGAAAGCGTTGATCCGTCGTGCGCGTCAGCTAAACCGAGCGGTAATCACGGc  <  1:2971830/60‑1 (MQ=255)    cGGCATTCAGAAAGCGTTGATCCGTCGTGCGCGTCAGCTAAACCGAGCGGTAATCACGGc  <  1:2971073/60‑1 (MQ=255)    cGGCATTCAGAAAGCGTTGATCCGTCGTGCGCGTCAGCTAAACCGAGCGGTAATCACGGc  <  1:2912402/60‑1 (MQ=255)    cGGCATTCAGAAAGCGTTGATCCGTCGTGCGCGTCAGCTAAACCGAGCGGTAATCACGGc  <  1:287269/60‑1 (MQ=255)    cGGCATTCAGAAAGCGTTGATCCGTCGTGCGCGTCAGCTAAACCGAGCGGTAATCACGGc  <  1:470531/60‑1 (MQ=255)    cGGCATTCAGAAAGCGTTGATCCGTCGTGCGCGTCAGCTAAACCGAGCGGTAATCACGGc  <  1:976806/60‑1 (MQ=255)    cGGCATTCAGAAAGCGTTGATCCGTCGTGCGCGTCAGCTAAACCGAGCGGTAATCACGGc  <  1:934872/60‑1 (MQ=255)    cGGCATTCAGAAAGCGTTGATCCGTCGTGCGCGTCAGCTAAACCGAGCGGTAATCACGGc  <  1:816884/60‑1 (MQ=255)    cGGCATTCAGAAAGCGTTGATCCGTCGTGCGCGTCAGCTAAACCGAGCGGTAATCACGGc  <  1:743521/60‑1 (MQ=255)    cGGCATTCAGAAAGCGTTGATCCGTCGTGCGCGTCAGCTAAACCGAGCGGTAATCACGGc  <  1:647579/60‑1 (MQ=255)    cGGCATTCAGAAAGCGTTGATCCGTCGTGCGCGTCAGCTAAACCGAGCGGTAATCACGGc  <  1:6405/60‑1 (MQ=255)    cGGCATTCAGAAAGCGTTGATCCGTCGTGCGCGTCAGCTAAACCGAGCGGTAATCACGGc  <  1:595797/60‑1 (MQ=255)    cGGCATTCAGAAAGCGTTGATCCGTCGTGCGCGTCAGCTAAACCGAGCGGTAATCACGGc  <  1:499951/60‑1 (MQ=255)    cGGCATTCAGAAAGCGTTGATCCGTCGTGCGCGTCAGCTAAACCGAGCGGTAATCACGGc  <  1:485243/60‑1 (MQ=255)    cGGCATTCAGAAAGCGTTGATCCGTCGTGCGCGTCAGCTAAACCGAGCGGTAATCACGGc  <  1:3353460/60‑1 (MQ=255)    cGGCATTCAGAAAGCGTTGATCCGTCGTGCGCGTCAGCTAAACCGAGCGGTAATCACGGc  <  1:391119/60‑1 (MQ=255)    cGGCATTCAGAAAGCGTTGATCCGTCGTGCGCGTCAGCTAAACCGAGCGGTAATCACGGc  <  1:370376/60‑1 (MQ=255)    cGGCATTCAGAAAGCGTTGATCCGTCGTGCGCGTCAGCTAAACCGAGCGGTAATCACGGc  <  1:3515170/60‑1 (MQ=255)    cGGCATTCAGAAAGCGTTGATCCGTCGTGCGCGTCAGCTAAACCGAGCGGTAATCACGGc  <  1:3486542/60‑1 (MQ=255)    cGGCATTCAGAAAGCGTTGATCCGTCGTGCGCGTCAGCTAAACCGAGCGGTAATCACGGc  <  1:3433966/60‑1 (MQ=255)    cGGCATTCAGAAAGCGTTGATCCGTCGTGCGCGTCAGCTAAACCGAGCGGTAATCACGGc  <  1:3431722/60‑1 (MQ=255)    cGGCATTCAGAAAGCGTTGATCCGTCGTGCGCGTCAGCTAAACCGAGCGGTAATCACGGc  <  1:3427676/60‑1 (MQ=255)    cGGCATTCAGAAAGCGTTGATCCGTCGTGCGCGTCAGCTAAACCGAGCGGTAATCACGGc  <  1:286447/60‑1 (MQ=255)    cGGCATTCAGAAAGCGTTGATCCGTCGTGCGCGTCAGCTAAACCGAGCGGTAATCACGGc  <  1:1395269/60‑1 (MQ=255)    cGGCATTCAGAAAGCGTTGATCCGTCGTGCGCGTCAGCTAAACCGAGCGGTAATCACGGc  <  1:1005637/60‑1 (MQ=255)    cGGCATTCAGAAAGCGTTGATCCGTCGTGCGCGTCAGCTAAACCGAGCGGTAATCACGGc  <  1:1880020/60‑1 (MQ=255)    cGGCATTCAGAAAGCGTTGATCCGTCGTGCGCGTCAGCTAAACCGAGCGGTAATCACGGc  <  1:1847938/60‑1 (MQ=255)    cGGCATTCAGAAAGCGTTGATCCGTCGTGCGCGTCAGCTAAACCGAGCGGTAATCACGGc  <  1:1820743/60‑1 (MQ=255)    cGGCATTCAGAAAGCGTTGATCCGTCGTGCGCGTCAGCTAAACCGAGCGGTAATCACGGc  <  1:1752789/60‑1 (MQ=255)    cGGCATTCAGAAAGCGTTGATCCGTCGTGCGCGTCAGCTAAACCGAGCGGTAATCACGGc  <  1:1735097/60‑1 (MQ=255)    cGGCATTCAGAAAGCGTTGATCCGTCGTGCGCGTCAGCTAAACCGAGCGGTAATCACGGc  <  1:1662538/60‑1 (MQ=255)    cGGCATTCAGAAAGCGTTGATCCGTCGTGCGCGTCAGCTAAACCGAGCGGTAATCACGGc  <  1:1606658/60‑1 (MQ=255)    cGGCATTCAGAAAGCGTTGATCCGTCGTGCGCGTCAGCTAAACCGAGCGGTAATCACGGc  <  1:16048/60‑1 (MQ=255)    cGGCATTCAGAAAGCGTTGATCCGTCGTGCGCGTCAGCTAAACCGAGCGGTAATCACGGc  <  1:1929455/60‑1 (MQ=255)    cGGCATTCAGAAAGCGTTGATCCGTCGTGCGCGTCAGCTAAACCGAGCGGTAATCACGGc  <  1:1366760/60‑1 (MQ=255)    cGGCATTCAGAAAGCGTTGATCCGTCGTGCGCGTCAGCTAAACCGAGCGGTAATCACGGc  <  1:1309613/60‑1 (MQ=255)    cGGCATTCAGAAAGCGTTGATCCGTCGTGCGCGTCAGCTAAACCGAGCGGTAATCACGGc  <  1:1207093/60‑1 (MQ=255)    cGGCATTCAGAAAGCGTTGATCCGTCGTGCGCGTCAGCTAAACCGAGCGGTAATCACGGc  <  1:1171378/60‑1 (MQ=255)    cGGCATTCAGAAAGCGTTGATCCGTCGTGCGCGTCAGCTAAACCGAGCGGTAATCACGGc  <  1:1138015/60‑1 (MQ=255)    cGGCATTCAGAAAGCGTTGATCCGTCGTGCGCGTCAGCTAAACCGAGCGGTAATCACGGc  <  1:1096945/60‑1 (MQ=255)    cGGCATTCAGAAAGCGTTGATCCGTCGTGCGCGTCAGCTAAACCGAGCGGTAATCACGGc  <  1:1089735/60‑1 (MQ=255)    cGGCATTCAGAAAGCGTTGATCCGTCGTGCGCGTCAGCTAAACCGAGCGGTAATCACGGc  <  1:1020532/60‑1 (MQ=255)    cGGCATTCAGAAAGCGTTGATCCGTCGTGCGCGTCAGCTAAACCGAGCGGTAATCACGGc  <  1:2497015/60‑1 (MQ=255)    cGGCATTCAGAAAGCGTTGATCCGTCGTGCGCGTCAGCTAAACCGAGCGGTAATCACGGc  <  1:2795779/60‑1 (MQ=255)    cGGCATTCAGAAAGCGTTGATCCGTCGTGCGCGTCAGCTAAACCGAGCGGTAATCACGGc  <  1:2708331/60‑1 (MQ=255)    cGGCATTCAGAAAGCGTTGATCCGTCGTGCGCGTCAGCTAAACCGAGCGGTAATCACGGc  <  1:2681570/60‑1 (MQ=255)    cGGCATTCAGAAAGCGTTGATCCGTCGTGCGCGTCAGCTAAACCGAGCGGTAATCACGGc  <  1:2658109/60‑1 (MQ=255)    cGGCATTCAGAAAGCGTTGATCCGTCGTGCGCGTCAGCTAAACCGAGCGGTAATCACGGc  <  1:2577832/60‑1 (MQ=255)    cGGCATTCAGAAAGCGTTGATCCGTCGTGCGCGTCAGCTAAACCGAGCGGTAATCACGGc  <  1:256307/60‑1 (MQ=255)    cGGCATTCAGAAAGCGTTGATCCGTCGTGCGCGTCAGCTAAACCGAGCGGTAATCACGGc  <  1:2546206/60‑1 (MQ=255)    cGGCATTCAGAAAGCGTTGATCCGTCGTGCGCGTCAGCTAAACCGAGCGGTAATCACGGc  <  1:2534262/60‑1 (MQ=255)    cGGCATTCAGAAAGCGTTGATCCGTCGTGCGCGTCAGCTAAACCGAGCGGTAATCACGGc  <  1:1933679/60‑1 (MQ=255)    cGGCATTCAGAAAGCGTTGATCCGTCGTGCGCGTCAGCTAAACCGAGCGGTAATCACGGc  <  1:2484451/60‑1 (MQ=255)    cGGCATTCAGAAAGCGTTGATCCGTCGTGCGCGTCAGCTAAACCGAGCGGTAATCACGGc  <  1:2396024/60‑1 (MQ=255)    cGGCATTCAGAAAGCGTTGATCCGTCGTGCGCGTCAGCTAAACCGAGCGGTAATCACGGc  <  1:2390780/60‑1 (MQ=255)    cGGCATTCAGAAAGCGTTGATCCGTCGTGCGCGTCAGCTAAACCGAGCGGTAATCACGGc  <  1:2121844/60‑1 (MQ=255)    cGGCATTCAGAAAGCGTTGATCCGTCGTGCGCGTCAGCTAAACCGAGCGGTAATCACGGc  <  1:2111641/60‑1 (MQ=255)    cGGCATTCAGAAAGCGTTGATCCGTCGTGCGCGTCAGCTAAACCGAGCGGTAATCACGGc  <  1:2079209/60‑1 (MQ=255)    cGGCATTCAGAAAGCGTTGATCCGTCGTGCGCGTCAGCTAAACCGAGCGGTAATCACGGc  <  1:198814/60‑1 (MQ=255)    cGGCATTCAGAAAGCGTTGATCCGTCGTGCGCGTCAGCTAAACCGAGCGGTAATCACGGc  <  1:1971163/60‑1 (MQ=255)     ggCATTCAGAAAGCGTTGATCCGTCGTGCGCGTCAGCTAAACCGAGCGGTAATCACGGc  <  1:3637251/59‑1 (MQ=255)                         ccGTCGTGCGCGTCAGCTAAACCGAGCGGTAATCACGGc  <  1:1373488/39‑1 (MQ=255)                                                               | GGTCGGCATTCAGAAAGCGTTGATCCGTCGTGCGCGTCAGCTAAACCGAGCGGTAATCACGGC  >  minE/1242350‑1242412

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑