Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	minE	1281293	1281311	19	76 [0]	[0] 13	yeeJ	adhesin

AAAGGCATGACGGATAGTAACGGGGTTGCAATCGCCTCCCTGACCGGCACGTTAGCGGGCAC  >  minE/1281231‑1281292                                                              | agaGGCATGACGGATAGTAACGGGGTTGCAATCGCCTCCCTGACCGGCACGTTAGCGGGCAc  <  1:2138621/60‑1 (MQ=255) aaaGGTATGACGGATAGTAACGGGGTTGCAATCGCCTCCCTGACCGGCACGTTAGCGGGCAc  <  1:756878/62‑1 (MQ=255) aaaGGCATGACGGATAGTAACGGGGTTGCAGTCGCCTCCCTGACCGGCACGTTAGCGGGCAc  <  1:1286810/62‑1 (MQ=255) aaaGGCATGACGGATAGTAACGGGGTTGCAATCGCCTCCCTGACCGGCACGTTAGCGGGCAc  <  1:3305998/62‑1 (MQ=255) aaaGGCATGACGGATAGTAACGGGGTTGCAATCGCCTCCCTGACCGGCACGTTAGCGGGCAc  <  1:3572483/62‑1 (MQ=255) aaaGGCATGACGGATAGTAACGGGGTTGCAATCGCCTCCCTGACCGGCACGTTAGCGGGCAc  <  1:3539593/62‑1 (MQ=255) aaaGGCATGACGGATAGTAACGGGGTTGCAATCGCCTCCCTGACCGGCACGTTAGCGGGCAc  <  1:3476726/62‑1 (MQ=255) aaaGGCATGACGGATAGTAACGGGGTTGCAATCGCCTCCCTGACCGGCACGTTAGCGGGCAc  <  1:3458559/62‑1 (MQ=255) aaaGGCATGACGGATAGTAACGGGGTTGCAATCGCCTCCCTGACCGGCACGTTAGCGGGCAc  <  1:3440337/62‑1 (MQ=255) aaaGGCATGACGGATAGTAACGGGGTTGCAATCGCCTCCCTGACCGGCACGTTAGCGGGCAc  <  1:3437170/62‑1 (MQ=255) aaaGGCATGACGGATAGTAACGGGGTTGCAATCGCCTCCCTGACCGGCACGTTAGCGGGCAc  <  1:3331413/62‑1 (MQ=255) aaaGGCATGACGGATAGTAACGGGGTTGCAATCGCCTCCCTGACCGGCACGTTAGCGGGCAc  <  1:3318443/62‑1 (MQ=255) aaaGGCATGACGGATAGTAACGGGGTTGCAATCGCCTCCCTGACCGGCACGTTAGCGGGCAc  <  1:3621758/62‑1 (MQ=255) aaaGGCATGACGGATAGTAACGGGGTTGCAATCGCCTCCCTGACCGGCACGTTAGCGGGCAc  <  1:3234024/62‑1 (MQ=255) aaaGGCATGACGGATAGTAACGGGGTTGCAATCGCCTCCCTGACCGGCACGTTAGCGGGCAc  <  1:318731/62‑1 (MQ=255) aaaGGCATGACGGATAGTAACGGGGTTGCAATCGCCTCCCTGACCGGCACGTTAGCGGGCAc  <  1:3185984/62‑1 (MQ=255) aaaGGCATGACGGATAGTAACGGGGTTGCAATCGCCTCCCTGACCGGCACGTTAGCGGGCAc  <  1:1025115/62‑1 (MQ=255) aaaGGCATGACGGATAGTAACGGGGTTGCAATCGCCTCCCTGACCGGCACGTTAGCGGGCAc  <  1:2878441/62‑1 (MQ=255) aaaGGCATGACGGATAGTAACGGGGTTGCAATCGCCTCCCTGACCGGCACGTTAGCGGGCAc  <  1:2821000/62‑1 (MQ=255) aaaGGCATGACGGATAGTAACGGGGTTGCAATCGCCTCCCTGACCGGCACGTTAGCGGGCAc  <  1:585455/62‑1 (MQ=255) aaaGGCATGACGGATAGTAACGGGGTTGCAATCGCCTCCCTGACCGGCACGTTAGCGGGCAc  <  1:992656/62‑1 (MQ=255) aaaGGCATGACGGATAGTAACGGGGTTGCAATCGCCTCCCTGACCGGCACGTTAGCGGGCAc  <  1:914164/62‑1 (MQ=255) aaaGGCATGACGGATAGTAACGGGGTTGCAATCGCCTCCCTGACCGGCACGTTAGCGGGCAc  <  1:867004/62‑1 (MQ=255) aaaGGCATGACGGATAGTAACGGGGTTGCAATCGCCTCCCTGACCGGCACGTTAGCGGGCAc  <  1:831227/62‑1 (MQ=255) aaaGGCATGACGGATAGTAACGGGGTTGCAATCGCCTCCCTGACCGGCACGTTAGCGGGCAc  <  1:782260/62‑1 (MQ=255) aaaGGCATGACGGATAGTAACGGGGTTGCAATCGCCTCCCTGACCGGCACGTTAGCGGGCAc  <  1:726293/62‑1 (MQ=255) aaaGGCATGACGGATAGTAACGGGGTTGCAATCGCCTCCCTGACCGGCACGTTAGCGGGCAc  <  1:70651/62‑1 (MQ=255) aaaGGCATGACGGATAGTAACGGGGTTGCAATCGCCTCCCTGACCGGCACGTTAGCGGGCAc  <  1:674593/62‑1 (MQ=255) aaaGGCATGACGGATAGTAACGGGGTTGCAATCGCCTCCCTGACCGGCACGTTAGCGGGCAc  <  1:3578450/62‑1 (MQ=255) aaaGGCATGACGGATAGTAACGGGGTTGCAATCGCCTCCCTGACCGGCACGTTAGCGGGCAc  <  1:579766/62‑1 (MQ=255) aaaGGCATGACGGATAGTAACGGGGTTGCAATCGCCTCCCTGACCGGCACGTTAGCGGGCAc  <  1:54697/62‑1 (MQ=255) aaaGGCATGACGGATAGTAACGGGGTTGCAATCGCCTCCCTGACCGGCACGTTAGCGGGCAc  <  1:428142/62‑1 (MQ=255) aaaGGCATGACGGATAGTAACGGGGTTGCAATCGCCTCCCTGACCGGCACGTTAGCGGGCAc  <  1:404441/62‑1 (MQ=255) aaaGGCATGACGGATAGTAACGGGGTTGCAATCGCCTCCCTGACCGGCACGTTAGCGGGCAc  <  1:3632386/62‑1 (MQ=255) aaaGGCATGACGGATAGTAACGGGGTTGCAATCGCCTCCCTGACCGGCACGTTAGCGGGCAc  <  1:3622484/62‑1 (MQ=255) aaaGGCATGACGGATAGTAACGGGGTTGCAATCGCCTCCCTGACCGGCACGTTAGCGGGCAc  <  1:2883459/62‑1 (MQ=255) aaaGGCATGACGGATAGTAACGGGGTTGCAATCGCCTCCCTGACCGGCACGTTAGCGGGCAc  <  1:1524967/62‑1 (MQ=255) aaaGGCATGACGGATAGTAACGGGGTTGCAATCGCCTCCCTGACCGGCACGTTAGCGGGCAc  <  1:2017074/62‑1 (MQ=255) aaaGGCATGACGGATAGTAACGGGGTTGCAATCGCCTCCCTGACCGGCACGTTAGCGGGCAc  <  1:2792068/62‑1 (MQ=255) aaaGGCATGACGGATAGTAACGGGGTTGCAATCGCCTCCCTGACCGGCACGTTAGCGGGCAc  <  1:1913532/62‑1 (MQ=255) aaaGGCATGACGGATAGTAACGGGGTTGCAATCGCCTCCCTGACCGGCACGTTAGCGGGCAc  <  1:1890949/62‑1 (MQ=255) aaaGGCATGACGGATAGTAACGGGGTTGCAATCGCCTCCCTGACCGGCACGTTAGCGGGCAc  <  1:1790593/62‑1 (MQ=255) aaaGGCATGACGGATAGTAACGGGGTTGCAATCGCCTCCCTGACCGGCACGTTAGCGGGCAc  <  1:1723489/62‑1 (MQ=255) aaaGGCATGACGGATAGTAACGGGGTTGCAATCGCCTCCCTGACCGGCACGTTAGCGGGCAc  <  1:169356/62‑1 (MQ=255) aaaGGCATGACGGATAGTAACGGGGTTGCAATCGCCTCCCTGACCGGCACGTTAGCGGGCAc  <  1:159076/62‑1 (MQ=255) aaaGGCATGACGGATAGTAACGGGGTTGCAATCGCCTCCCTGACCGGCACGTTAGCGGGCAc  <  1:1582682/62‑1 (MQ=255) aaaGGCATGACGGATAGTAACGGGGTTGCAATCGCCTCCCTGACCGGCACGTTAGCGGGCAc  <  1:1975683/62‑1 (MQ=255) aaaGGCATGACGGATAGTAACGGGGTTGCAATCGCCTCCCTGACCGGCACGTTAGCGGGCAc  <  1:136429/62‑1 (MQ=255) aaaGGCATGACGGATAGTAACGGGGTTGCAATCGCCTCCCTGACCGGCACGTTAGCGGGCAc  <  1:1335275/62‑1 (MQ=255) aaaGGCATGACGGATAGTAACGGGGTTGCAATCGCCTCCCTGACCGGCACGTTAGCGGGCAc  <  1:128910/62‑1 (MQ=255) aaaGGCATGACGGATAGTAACGGGGTTGCAATCGCCTCCCTGACCGGCACGTTAGCGGGCAc  <  1:1265185/62‑1 (MQ=255) aaaGGCATGACGGATAGTAACGGGGTTGCAATCGCCTCCCTGACCGGCACGTTAGCGGGCAc  <  1:1229217/62‑1 (MQ=255) aaaGGCATGACGGATAGTAACGGGGTTGCAATCGCCTCCCTGACCGGCACGTTAGCGGGCAc  <  1:1175420/62‑1 (MQ=255) aaaGGCATGACGGATAGTAACGGGGTTGCAATCGCCTCCCTGACCGGCACGTTAGCGGGCAc  <  1:1127529/62‑1 (MQ=255) aaaGGCATGACGGATAGTAACGGGGTTGCAATCGCCTCCCTGACCGGCACGTTAGCGGGCAc  <  1:1123785/62‑1 (MQ=255) aaaGGCATGACGGATAGTAACGGGGTTGCAATCGCCTCCCTGACCGGCACGTTAGCGGGCAc  <  1:2438745/62‑1 (MQ=255) aaaGGCATGACGGATAGTAACGGGGTTGCAATCGCCTCCCTGACCGGCACGTTAGCGGGCAc  <  1:2761771/62‑1 (MQ=255) aaaGGCATGACGGATAGTAACGGGGTTGCAATCGCCTCCCTGACCGGCACGTTAGCGGGCAc  <  1:2679334/62‑1 (MQ=255) aaaGGCATGACGGATAGTAACGGGGTTGCAATCGCCTCCCTGACCGGCACGTTAGCGGGCAc  <  1:2668074/62‑1 (MQ=255) aaaGGCATGACGGATAGTAACGGGGTTGCAATCGCCTCCCTGACCGGCACGTTAGCGGGCAc  <  1:2635576/62‑1 (MQ=255) aaaGGCATGACGGATAGTAACGGGGTTGCAATCGCCTCCCTGACCGGCACGTTAGCGGGCAc  <  1:2562180/62‑1 (MQ=255) aaaGGCATGACGGATAGTAACGGGGTTGCAATCGCCTCCCTGACCGGCACGTTAGCGGGCAc  <  1:2521763/62‑1 (MQ=255) aaaGGCATGACGGATAGTAACGGGGTTGCAATCGCCTCCCTGACCGGCACGTTAGCGGGCAc  <  1:2055644/62‑1 (MQ=255) aaaGGCATGACGGATAGTAACGGGGTTGCAATCGCCTCCCTGACCGGCACGTTAGCGGGCAc  <  1:241316/62‑1 (MQ=255) aaaGGCATGACGGATAGTAACGGGGTTGCAATCGCCTCCCTGACCGGCACGTTAGCGGGCAc  <  1:2406074/62‑1 (MQ=255) aaaGGCATGACGGATAGTAACGGGGTTGCAATCGCCTCCCTGACCGGCACGTTAGCGGGCAc  <  1:2266115/62‑1 (MQ=255) aaaGGCATGACGGATAGTAACGGGGTTGCAATCGCCTCCCTGACCGGCACGTTAGCGGGCAc  <  1:2229163/62‑1 (MQ=255) aaaGGCATGACGGATAGTAACGGGGTTGCAATCGCCTCCCTGACCGGCACGTTAGCGGGCAc  <  1:2217363/62‑1 (MQ=255) aaaGGCATGACGGATAGTAACGGGGTTGCAATCGCCTCCCTGACCGGCACGTTAGCGGGCAc  <  1:2137015/62‑1 (MQ=255) aaaGGCATGACGGATAGTAACGGGGTCGCAATCGCCTCCCTGACCGGCACGTTAGCGGGCAc  <  1:435941/62‑1 (MQ=255)  aaGGCATGACGGATAGTAACGGGGTTGCAATCGCCTCCCTGACCGGCACGTTAGCGGGCAc  <  1:3256880/61‑1 (MQ=255)  aaGGCATGACGGATAGTAACGGGGTTGCAATCGCCTCCCTGACCGGCACGTTAGCGGGCAc  <  1:3221015/61‑1 (MQ=255)  aaGGCATGACGGATAGTAACGGGGTTGCAATCGCCTCCCTGACCGGCACGTTAGCGGGCAc  <  1:369031/61‑1 (MQ=255)      cATGACGGATAGTAACGGGGTTGCAATCGCCTCCCTGACCGGCACGTTAGCGGGCAc  <  1:918770/57‑1 (MQ=255)                         gTTGCAATCGCCTCCCTGACCGGCACGTTAGCGGGCAc  <  1:3073289/38‑1 (MQ=255)                           tGCAATCGCCTCCCTGACCGGCACGTTAGCGGGCAc  <  1:3353868/36‑1 (MQ=255)                                                              | AAAGGCATGACGGATAGTAACGGGGTTGCAATCGCCTCCCTGACCGGCACGTTAGCGGGCAC  >  minE/1281231‑1281292

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑